Publications by authors named "Radoje Drmanac"

42Publications

Impact of sequencing depth and technology on de novo RNA-Seq assembly.

BMC Genomics 2019 Jul 23;20(1):604. Epub 2019 Jul 23.

Department of Medicine, University of Alberta, Edmonton, AB, T6G 2E1, Canada.

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http://dx.doi.org/10.1186/s12864-019-5965-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6651908PMC
July 2019

Significant abundance of cis configurations of coding variants in diploid human genomes.

Nucleic Acids Res 2019 04;47(6):2981-2995

Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany.

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http://dx.doi.org/10.1093/nar/gkz031DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6451136PMC
April 2019

Advanced Whole-Genome Sequencing and Analysis of Fetal Genomes from Amniotic Fluid.

Clin Chem 2018 04 15;64(4):715-725. Epub 2018 Mar 15.

Advanced Genomics Technology Lab, Complete Genomics, Inc., San Jose, CA;

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http://dx.doi.org/10.1373/clinchem.2017.281220DOI Listing
April 2018

Pure CTCs, advanced WGS, and precise personalized combination therapies.

Oncoscience 2017 Jul 21;4(7-8):75-76. Epub 2017 Sep 21.

Complete Genomics, Inc., San Jose, California; BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.18632/oncoscience.362DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5616199PMC
July 2017

Long Fragment Read (LFR) Technology: Cost-Effective, High-Quality Genome-Wide Molecular Haplotyping.

Methods Mol Biol 2017 ;1551:191-205

Complete Genomics, Inc., 2071 Stierlin Court, Mountain View, CA, 94043, USA.

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http://link.springer.com/10.1007/978-1-4939-6750-6_11
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http://dx.doi.org/10.1007/978-1-4939-6750-6_11DOI Listing
July 2018

Whole genome sequence analysis of BT-474 using complete Genomics' standard and long fragment read technologies.

Gigascience 2016 9;5. Epub 2016 Feb 9.

Complete Genomics, Inc., 2071 Stierlin Court, Mountain View, CA 94043 USA ; BGI-Shenzhen, Shenzhen, 518083 China.

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http://dx.doi.org/10.1186/s13742-016-0113-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4748558PMC
October 2016

De novo assembly of a haplotype-resolved human genome.

Nat Biotechnol 2015 Jun 25;33(6):617-22. Epub 2015 May 25.

1] BGI-Shenzhen, Shenzhen, China. [2] Department of Biology, University of Copenhagen, Copenhagen, Denmark. [3] Princess Al Jawhara Albrahim Center of Excellence in the Research of Hereditary Disorders, King Abdulaziz University, Jeddah, Saudi Arabia. [4] Macau University of Science and Technology, Taipa, Macau, China. [5] Department of Medicine and State Key Laboratory of Pharmaceutical Biotechnology, University of Hong Kong, Hong Kong, China.

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http://dx.doi.org/10.1038/nbt.3200DOI Listing
June 2015

Co-barcoded sequence reads from long DNA fragments: a cost-effective solution for "perfect genome" sequencing.

Front Genet 2014 14;5:466. Epub 2015 Jan 14.

Department of Research, Complete Genomics Inc., Mountain View CA, USA ; BGI, Shenzhen China.

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http://dx.doi.org/10.3389/fgene.2014.00466DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4294197PMC
February 2015

Accurate whole genome sequencing as the ultimate genetic test.

Clin Chem 2015 Jan 5;61(1):305-6. Epub 2014 Dec 5.

BGI-Shenzhen, Shenzhen, China;

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http://dx.doi.org/10.1373/clinchem.2014.224907DOI Listing
January 2015

Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations.

Nat Commun 2014 Sep 3;5:4767. Epub 2014 Sep 3.

1] Unit for Medical Biotechnology, Inflammation Research Center, VIB, Technologiepark 927, Ghent B-9052, Belgium [2] Laboratory for Protein Biochemistry and Biomolecular Engineering, Department of Biochemistry and Microbiology, Ghent University, Ledeganckstraat 35, Ghent B-9052, Belgium.

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http://dx.doi.org/10.1038/ncomms5767DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4166678PMC
September 2014

Personalized pharmacogenomics profiling using whole-genome sequencing.

Pharmacogenomics 2014 Jun;15(9):1223-34

Laboratory of Molecular Genetics, Department of Physiology & Biochemistry, University of Malta, Msida, Malta.

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http://dx.doi.org/10.2217/pgs.14.102DOI Listing
June 2014

Truncating mutations of MAGEL2 cause Prader-Willi phenotypes and autism.

Nat Genet 2013 Nov 29;45(11):1405-8. Epub 2013 Sep 29.

1] Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, USA. [2] Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, Texas, USA. [3].

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http://www.nature.com/articles/ng.2776
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http://dx.doi.org/10.1038/ng.2776DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3819162PMC
November 2013

Medicine. The ultimate genetic test.

Authors:
Radoje Drmanac

Science 2012 Jun;336(6085):1110-2

Complete Genomics, Inc., Mountain View, CA 94043, USA.

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http://dx.doi.org/10.1126/science.1221037DOI Listing
June 2012

The advent of personal genome sequencing.

Authors:
Radoje Drmanac

Genet Med 2011 Mar;13(3):188-90

Complete Genomics, Inc, Mountain View, California 94043, USA.

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http://dx.doi.org/10.1097/GIM.0b013e31820f16e6DOI Listing
March 2011

Combinatorial sequencing-by-hybridization: analysis of the NF1 gene.

Genet Test 2006 ;10(1):8-17

Center for Translational Medicine, Department of Medicine, Thomas Jefferson University, Jefferson Medical College, Philadelphia, Pennsylvania 19107, USA.

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http://dx.doi.org/10.1089/gte.2006.10.8DOI Listing
June 2006

Multiplexed SNP genotyping using nanobarcode particle technology.

Anal Bioanal Chem 2006 Feb 19;384(3):658-66. Epub 2006 Jan 19.

Nanoplex Technologies Inc, 665 Clyde Avenue, Mountain View, CA 94043, USA.

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http://dx.doi.org/10.1007/s00216-005-0225-0DOI Listing
February 2006

Identification of APC gene mutations in colorectal cancer using universal microarray-based combinatorial sequencing-by-hybridization.

Hum Mutat 2004 Sep;24(3):261-71

Center for Translational Medicine, Department of Medicine, Thomas Jefferson University, Jefferson Medical College, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1002/humu.20078DOI Listing
September 2004

Selective DNA amplification from complex genomes using universal double-sided adapters.

Nucleic Acids Res 2004 Jan 28;32(2):e21. Epub 2004 Jan 28.

Callida Genomics Inc., 675 Almanor Avenue, Sunnyvale, CA 94085, USA.

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http://dx.doi.org/10.1093/nar/gnh019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC373375PMC
January 2004