John Arne Dahl

John Arne Dahl

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John Arne Dahl

John Arne Dahl

Publications by authors named "John Arne Dahl"

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Going low to reach high: Small-scale ChIP-seq maps new terrain.

Wiley Interdiscip Rev Syst Biol Med 2019 Sep 3:e1465. Epub 2019 Sep 3.

Department of Microbiology, Oslo University Hospital, Oslo, Norway.

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http://dx.doi.org/10.1002/wsbm.1465DOI Listing
September 2019

Epigenetic age is a cell-intrinsic property in transplanted human hematopoietic cells.

Aging Cell 2019 Apr 2;18(2):e12897. Epub 2019 Feb 2.

Division of Hematology/Oncology, Department of Medicine, School of Medicine, Case Western Reserve University, Cleveland, Ohio.

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http://dx.doi.org/10.1111/acel.12897DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6413751PMC
April 2019

How low can you go? Pushing the limits of low-input ChIP-seq.

Brief Funct Genomics 2018 03;17(2):89-95

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http://dx.doi.org/10.1093/bfgp/elx037DOI Listing
March 2018

Reversible RNA modifications in meiosis and pluripotency.

Nat Methods 2016 12;14(1):18-22

Department of Microbiology, Oslo University Hospital, Rikshospitalet, Oslo, Norway.

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http://dx.doi.org/10.1038/nmeth.4111DOI Listing
December 2016

DNA base modifications in honey bee and fruit fly genomes suggest an active demethylation machinery with species- and tissue-specific turnover rates.

Biochem Biophys Rep 2016 Jul 22;6:9-15. Epub 2016 Feb 22.

Department of Microbiology, Division of diagnostics and intervention, Institute of Clinical Medicine, Oslo University Hospital, Rikshospitalet, NO-0027 Oslo, Norway.

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https://linkinghub.elsevier.com/retrieve/pii/S24055808163001
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http://dx.doi.org/10.1016/j.bbrep.2016.02.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5600429PMC
July 2016

Sequencing of FTO and ALKBH5 in men undergoing infertility work-up identifies an infertility-associated variant and two missense mutations.

Fertil Steril 2016 05 25;105(5):1170-1179.e5. Epub 2016 Jan 25.

Department of Gynecology, Oslo University Hospital and Institute of Clinical Medicine, University of Oslo, Oslo, Norway. Electronic address:

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http://dx.doi.org/10.1016/j.fertnstert.2016.01.002DOI Listing
May 2016

Micro chromatin immunoprecipitation (μChIP) from early mammalian embryos.

Methods Mol Biol 2015 ;1222:227-45

Institute of Clinical Medicine, Division of diagnostics and intervention, Department of Microbiology, Oslo university hospital, Rikshospitalet, NO-0027, Oslo, Norway,

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http://dx.doi.org/10.1007/978-1-4939-1594-1_17DOI Listing
June 2015

DNA metabolism: bases of DNA repair and regulation.

Nat Chem Biol 2014 Jul;10(7):487-8

Department of Microbiology, University of Oslo, Oslo University Hospital, Oslo, Norway.

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http://dx.doi.org/10.1038/nchembio.1553DOI Listing
July 2014

Dynamic RNA modifications in disease.

Curr Opin Genet Dev 2014 Jun 5;26:47-52. Epub 2014 Jul 5.

Clinic for Diagnostics and Intervention and Institute of Medical Microbiology, Oslo University Hospital, Rikshospitalet, Sognsvannsveien 20, 0027 Oslo, Norway.

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http://dx.doi.org/10.1016/j.gde.2014.05.006DOI Listing
June 2014

Sprouts of RNA epigenetics: the discovery of mammalian RNA demethylases.

RNA Biol 2013 Jun 17;10(6):915-8. Epub 2013 Apr 17.

Department of Chemistry and Institute for Biophysical Dynamics, The University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.4161/rna.24711DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3904589PMC
June 2013

Histone modifications and mRNA expression in the inner cell mass and trophectoderm of bovine blastocysts.

Epigenetics 2013 Mar 13;8(3):281-9. Epub 2013 Feb 13.

Institute of Farm Animal Genetics (FLI), Neustadt, Germany.

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http://dx.doi.org/10.4161/epi.23899DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3669120PMC
March 2013

Pull-down of 5-hydroxymethylcytosine DNA using JBP1-coated magnetic beads.

Nat Protoc 2012 Jan 26;7(2):340-50. Epub 2012 Jan 26.

Centre for Molecular Biology and Neuroscience, Institute of Medical Microbiology, Oslo University Hospital Rikshospitalet, Oslo, Norway.

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http://dx.doi.org/10.1038/nprot.2011.443DOI Listing
January 2012

MicroChIP: chromatin immunoprecipitation for small cell numbers.

Methods Mol Biol 2009 ;567:59-74

Department of Biochemistry, Institute of Basic Medical Sciences, University of Oslo, Oslo, Norway.

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http://dx.doi.org/10.1007/978-1-60327-414-2_4DOI Listing
January 2010

Genetic and epigenetic instability of human bone marrow mesenchymal stem cells expanded in autologous serum or fetal bovine serum.

Int J Dev Biol 2008 ;52(8):1033-42

Department of Biochemistry, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, and Rikshospitalet Medical Centre, Oslo, Norway.

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http://dx.doi.org/10.1387/ijdb.082663jdDOI Listing
March 2009

Fast genomic muChIP-chip from 1,000 cells.

Genome Biol 2009 Feb 10;10(2):R13. Epub 2009 Feb 10.

Institute of Basic Medical Sciences, Department of Biochemistry, Faculty of Medicine, University of Oslo, 0317 Oslo, Norway.

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http://dx.doi.org/10.1186/gb-2009-10-2-r13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688267PMC
February 2009

Sensitive on-chip quantitative real-time PCR performed on an adaptable and robust platform.

Biomed Microdevices 2008 Dec;10(6):769-776

DTU Nanotech-Department of Micro and Nanotechnology, Technical University of Denmark, Building 345 East, 2800, Kongens Lyngby, Denmark.

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http://dx.doi.org/10.1007/s10544-008-9189-0DOI Listing
December 2008

A rapid micro chromatin immunoprecipitation assay (microChIP).

Nat Protoc 2008 ;3(6):1032-45

Department of Biochemistry, Faculty of Medicine, Institute of Basic Medical Sciences, University of Oslo, Oslo 0317, Norway.

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http://dx.doi.org/10.1038/nprot.2008.68DOI Listing
September 2008

High-resolution analysis of genetic stability of human adipose tissue stem cells cultured to senescence.

J Cell Mol Med 2008 Apr;12(2):553-63

Department of Tumor Biology, Rikshospitalet-Radiumhospitalet Medical Center, Montebello, Oslo, Norway.

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http://dx.doi.org/10.1111/j.1582-4934.2007.00146.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3822542PMC
April 2008

MicroChIP--a rapid micro chromatin immunoprecipitation assay for small cell samples and biopsies.

Nucleic Acids Res 2008 Feb 17;36(3):e15. Epub 2008 Jan 17.

Institute of Basic Medical Sciences, Department of Biochemistry, Faculty of Medicine, University of Oslo, 0317 Oslo, Norway.

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http://dx.doi.org/10.1093/nar/gkm1158DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2241883PMC
February 2008

Chop it, ChIP it, check it: the current status of chromatin immunoprecipitation.

Front Biosci 2008 Jan 1;13:929-43. Epub 2008 Jan 1.

Institute of Basic Medical Sciences, Department of Biochemistry, Faculty of Medicine, University of Oslo, PO Box 1112 Blindern, 0317 Oslo, Norway.

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http://dx.doi.org/10.2741/2733DOI Listing
January 2008

A quick and quantitative chromatin immunoprecipitation assay for small cell samples.

Front Biosci 2007 Sep 1;12:4925-31. Epub 2007 Sep 1.

Institute of Basic Medical Sciences, Department of Biochemistry, Faculty of Medicine, University of Oslo, Blindern, Oslo, Norway.

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http://dx.doi.org/10.2741/2438DOI Listing
September 2007

Epigenetic reprogramming of OCT4 and NANOG regulatory regions by embryonal carcinoma cell extract.

Mol Biol Cell 2007 May 21;18(5):1543-53. Epub 2007 Feb 21.

Department of Biochemistry, Faculty of Medicine, Institute of Basic Medical Sciences, University of Oslo, 0317 Oslo, Norway.

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http://www.molbiolcell.org/doi/10.1091/mbc.e07-01-0029
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http://dx.doi.org/10.1091/mbc.e07-01-0029DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1855029PMC
May 2007

Q2ChIP, a quick and quantitative chromatin immunoprecipitation assay, unravels epigenetic dynamics of developmentally regulated genes in human carcinoma cells.

Stem Cells 2007 Apr 1;25(4):1037-46. Epub 2007 Feb 1.

Institute of Basic Medical Sciences, Department of Biochemistry, Faculty of Medicine, University of Oslo, Oslo, Norway.

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http://dx.doi.org/10.1634/stemcells.2006-0430DOI Listing
April 2007

On the way to reprogramming cells to pluripotency using cell-free extracts.

Reprod Biomed Online 2006 Jun;12(6):762-70

Institute of Basic Medical Sciences, Department of Biochemistry, University of Oslo, PO Box 1112 Blindern, 0317 Oslo, Norway.

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http://dx.doi.org/10.1016/s1472-6483(10)61088-7DOI Listing
June 2006