Chiara Sabatti

Chiara Sabatti

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Chiara Sabatti

Chiara Sabatti

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Selection-adjusted inference: an application to confidence intervals for cis-eQTL effect sizes.

Biostatistics 2019 Jul 13. Epub 2019 Jul 13.

Department of Biomedical Data Science and Department of Statistics, Stanford University, 390 Serra Mall, Stanford, CA, USA.

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http://dx.doi.org/10.1093/biostatistics/kxz024DOI Listing
July 2019

Genetic analyses of diverse populations improves discovery for complex traits.

Nature 2019 Jun 19;570(7762):514-518. Epub 2019 Jun 19.

Division of Public Health Science, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.

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http://dx.doi.org/10.1038/s41586-019-1310-4DOI Listing
June 2019

Exploratory Gene Ontology Analysis with Interactive Visualization.

Sci Rep 2019 May 24;9(1):7793. Epub 2019 May 24.

Department of Statistics, Stanford University, Stanford, CA, USA.

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http://dx.doi.org/10.1038/s41598-019-42178-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6534545PMC
May 2019

Understanding the Hidden Complexity of Latin American Population Isolates.

Am J Hum Genet 2018 11 25;103(5):707-726. Epub 2018 Oct 25.

Department of Human Genetics, University of California Los Angeles, Los Angeles, CA 90095, USA; Department of Ecology & Evolutionary Biology, University of California Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00029297183035
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http://dx.doi.org/10.1016/j.ajhg.2018.09.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218714PMC
November 2018

Multiregion Quantification of Extracellular Signal-regulated Kinase Activity in Renal Cell Carcinoma.

Eur Urol Oncol 2018 Nov 19. Epub 2018 Nov 19.

Division of Oncology, Department of Medicine, Stanford University School of Medicine, Stanford, CA, USA; The Kidney Cancer Research Program, Stanford University School of Medicine, Stanford, CA, USA; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA, USA; Bio-X, Stanford University, Stanford, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.euo.2018.09.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697234PMC
November 2018

Controlling the Rate of GWAS False Discoveries.

Genetics 2017 01 26;205(1):61-75. Epub 2016 Oct 26.

Department of Biomedical Data Science, Stanford University, California

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http://dx.doi.org/10.1534/genetics.116.193987DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5223524PMC
January 2017

Genetic Variant Selection: Learning Across Traits and Sites.

Genetics 2016 Feb 17;202(2):439-55. Epub 2015 Dec 17.

Department of Health Research and Policy, Stanford University, Stanford, California 94305 Department of Statistics, Stanford University, Stanford, California 94305.

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http://dx.doi.org/10.1534/genetics.115.184572DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4788227PMC
February 2016

Many Phenotypes Without Many False Discoveries: Error Controlling Strategies for Multitrait Association Studies.

Genet Epidemiol 2016 Jan 2;40(1):45-56. Epub 2015 Dec 2.

Department of Health Research and Policy, Stanford University, Stanford, California, United States of America.

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http://doi.wiley.com/10.1002/gepi.21942
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http://dx.doi.org/10.1002/gepi.21942DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4738479PMC
January 2016

Cross-disorder genome-wide analyses suggest a complex genetic relationship between Tourette's syndrome and OCD.

Authors:
Dongmei Yu Carol A Mathews Jeremiah M Scharf Benjamin M Neale Lea K Davis Eric R Gamazon Eske M Derks Patrick Evans Christopher K Edlund Jacquelyn Crane Jesen A Fagerness Lisa Osiecki Patience Gallagher Gloria Gerber Stephen Haddad Cornelia Illmann Lauren M McGrath Catherine Mayerfeld Sampath Arepalli Cristina Barlassina Cathy L Barr Laura Bellodi Fortu Benarroch Gabriel Bedoya Berrió O Joseph Bienvenu Donald W Black Michael H Bloch Helena Brentani Ruth D Bruun Cathy L Budman Beatriz Camarena Desmond D Campbell Carolina Cappi Julio C Cardona Silgado Maria C Cavallini Denise A Chavira Sylvain Chouinard Edwin H Cook M R Cookson Vladimir Coric Bernadette Cullen Daniele Cusi Richard Delorme Damiaan Denys Yves Dion Valsama Eapen Karin Egberts Peter Falkai Thomas Fernandez Eduardo Fournier Helena Garrido Daniel Geller Donald L Gilbert Simon L Girard Hans J Grabe Marco A Grados Benjamin D Greenberg Varda Gross-Tsur Edna Grünblatt John Hardy Gary A Heiman Sian M J Hemmings Luis D Herrera Dianne M Hezel Pieter J Hoekstra Joseph Jankovic James L Kennedy Robert A King Anuar I Konkashbaev Barbara Kremeyer Roger Kurlan Nuria Lanzagorta Marion Leboyer James F Leckman Leonhard Lennertz Chunyu Liu Christine Lochner Thomas L Lowe Sara Lupoli Fabio Macciardi Wolfgang Maier Paolo Manunta Maurizio Marconi James T McCracken Sandra C Mesa Restrepo Rainald Moessner Priya Moorjani Jubel Morgan Heike Muller Dennis L Murphy Allan L Naarden Erika Nurmi William Cornejo Ochoa Roel A Ophoff Andrew J Pakstis Michele T Pato Carlos N Pato John Piacentini Christopher Pittenger Yehuda Pollak Scott L Rauch Tobias Renner Victor I Reus Margaret A Richter Mark A Riddle Mary M Robertson Roxana Romero Maria C Rosário David Rosenberg Stephan Ruhrmann Chiara Sabatti Erika Salvi Aline S Sampaio Jack Samuels Paul Sandor Susan K Service Brooke Sheppard Harvey S Singer Jan H Smit Dan J Stein Eric Strengman Jay A Tischfield Maurizio Turiel Ana V Valencia Duarte Homero Vallada Jeremy Veenstra-VanderWeele Susanne Walitza Ying Wang Mike Weale Robert Weiss Jens R Wendland Herman G M Westenberg Yin Yao Shugart Ana G Hounie Euripedes C Miguel Humberto Nicolini Michael Wagner Andres Ruiz-Linares Danielle C Cath William McMahon Danielle Posthuma Ben A Oostra Gerald Nestadt Guy A Rouleau Shaun Purcell Michael A Jenike Peter Heutink Gregory L Hanna David V Conti Paul D Arnold Nelson B Freimer S Evelyn Stewart James A Knowles Nancy J Cox David L Pauls

Am J Psychiatry 2015 Jan 31;172(1):82-93. Epub 2014 Oct 31.

From the Psychiatric and Neurodevelopmental Genetics Unit, Center for Human Genetics Research, Department of Psychiatry, Massachusetts General Hospital, Harvard Medical School, Boston; the Stanley Center for Psychiatric Research, Broad Institute of Harvard and MIT, Cambridge, Mass.; the Department of Psychiatry, University of California, San Francisco; the Department of Neurology, Massachusetts General Hospital, Boston; the Division of Cognitive and Behavioral Neurology, Brigham and Women's Hospital, Boston; the Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston; Section of Genetic Medicine, Department of Medicine, University of Chicago, Chicago; the Department of Psychiatry, Academic Medical Center, University of Amsterdam, Amsterdam; the Department of Preventive Medicine, Division of Biostatistics, Keck School of Medicine, University of Southern California, Los Angeles; the Laboratory of Neurogenetics, National Institute on Aging, Bethesda, Md.; the Genomic and Bioinformatic Unit, Filarete Foundation, Milan, Italy; the Department of Health Sciences, Graduate School of Nephrology, University of Milan, Milan; the Toronto Western Research Institute, University Health Network, Toronto; Hospital for Sick Children, Toronto; Università Vita-Salute San Raffaele, Milan; the Herman Dana Division of Child and Adolescent Psychiatry, Hadassah-Hebrew University Medical Center, Jerusalem; Universidad de Antioquia, Universidad Pontificia Bolivariana, Medellín, Colombia; the Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, Baltimore; the Department of Psychiatry, Roy J. and Lucille A. Carver College of Medicine, University of Iowa, Iowa City; the Child Study Center and the Department of Psychiatry, Yale University School of Medicine, New Haven, Conn.; the Department of Psychiatry, University of São Paulo Medical School, São Paulo, Brazil; North Shore-Long Island Jewish Medical Center and North Shore-Lo

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http://dx.doi.org/10.1176/appi.ajp.2014.13101306DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4282594PMC
January 2015

SLOPE-ADAPTIVE VARIABLE SELECTION VIA CONVEX OPTIMIZATION.

Ann Appl Stat 2015;9(3):1103-1140

Department of Statistics, Stanford University, 390 Serra Mall, Sequoia Hall, Stanford, California 94305, USA.

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http://dx.doi.org/10.1214/15-AOAS842DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4689150PMC
January 2015

Novel loci for adiponectin levels and their influence on type 2 diabetes and metabolic traits: a multi-ethnic meta-analysis of 45,891 individuals.

Authors:
Zari Dastani Marie-France Hivert Nicholas Timpson John R B Perry Xin Yuan Robert A Scott Peter Henneman Iris M Heid Jorge R Kizer Leo-Pekka Lyytikäinen Christian Fuchsberger Toshiko Tanaka Andrew P Morris Kerrin Small Aaron Isaacs Marian Beekman Stefan Coassin Kurt Lohman Lu Qi Stavroula Kanoni James S Pankow Hae-Won Uh Ying Wu Aurelian Bidulescu Laura J Rasmussen-Torvik Celia M T Greenwood Martin Ladouceur Jonna Grimsby Alisa K Manning Ching-Ti Liu Jaspal Kooner Vincent E Mooser Peter Vollenweider Karen A Kapur John Chambers Nicholas J Wareham Claudia Langenberg Rune Frants Ko Willems-Vandijk Ben A Oostra Sara M Willems Claudia Lamina Thomas W Winkler Bruce M Psaty Russell P Tracy Jennifer Brody Ida Chen Jorma Viikari Mika Kähönen Peter P Pramstaller David M Evans Beate St Pourcain Naveed Sattar Andrew R Wood Stefania Bandinelli Olga D Carlson Josephine M Egan Stefan Böhringer Diana van Heemst Lyudmyla Kedenko Kati Kristiansson Marja-Liisa Nuotio Britt-Marie Loo Tamara Harris Melissa Garcia Alka Kanaya Margot Haun Norman Klopp H-Erich Wichmann Panos Deloukas Efi Katsareli David J Couper Bruce B Duncan Margreet Kloppenburg Linda S Adair Judith B Borja James G Wilson Solomon Musani Xiuqing Guo Toby Johnson Robert Semple Tanya M Teslovich Matthew A Allison Susan Redline Sarah G Buxbaum Karen L Mohlke Ingrid Meulenbelt Christie M Ballantyne George V Dedoussis Frank B Hu Yongmei Liu Bernhard Paulweber Timothy D Spector P Eline Slagboom Luigi Ferrucci Antti Jula Markus Perola Olli Raitakari Jose C Florez Veikko Salomaa Johan G Eriksson Timothy M Frayling Andrew A Hicks Terho Lehtimäki George Davey Smith David S Siscovick Florian Kronenberg Cornelia van Duijn Ruth J F Loos Dawn M Waterworth James B Meigs Josee Dupuis J Brent Richards Benjamin F Voight Laura J Scott Valgerdur Steinthorsdottir Christian Dina Ryan P Welch Eleftheria Zeggini Cornelia Huth Yurii S Aulchenko Gudmar Thorleifsson Laura J McCulloch Teresa Ferreira Harald Grallert Najaf Amin Guanming Wu Cristen J Willer Soumya Raychaudhuri Steve A McCarroll Oliver M Hofmann Ayellet V Segrè Mandy van Hoek Pau Navarro Kristin Ardlie Beverley Balkau Rafn Benediktsson Amanda J Bennett Roza Blagieva Eric Boerwinkle Lori L Bonnycastle Kristina Bengtsson Boström Bert Bravenboer Suzannah Bumpstead Noël P Burtt Guillaume Charpentier Peter S Chines Marilyn Cornelis Gabe Crawford Alex S F Doney Katherine S Elliott Amanda L Elliott Michael R Erdos Caroline S Fox Christopher S Franklin Martha Ganser Christian Gieger Niels Grarup Todd Green Simon Griffin Christopher J Groves Candace Guiducci Samy Hadjadj Neelam Hassanali Christian Herder Bo Isomaa Anne U Jackson Paul R V Johnson Torben Jørgensen Wen H L Kao Augustine Kong Peter Kraft Johanna Kuusisto Torsten Lauritzen Man Li Aloysius Lieverse Cecilia M Lindgren Valeriya Lyssenko Michel Marre Thomas Meitinger Kristian Midthjell Mario A Morken Narisu Narisu Peter Nilsson Katharine R Owen Felicity Payne Ann-Kristin Petersen Carl Platou Christine Proença Inga Prokopenko Wolfgang Rathmann N William Rayner Neil R Robertson Ghislain Rocheleau Michael Roden Michael J Sampson Richa Saxena Beverley M Shields Peter Shrader Gunnar Sigurdsson Thomas Sparsø Klaus Strassburger Heather M Stringham Qi Sun Amy J Swift Barbara Thorand Jean Tichet Tiinamaija Tuomi Rob M van Dam Timon W van Haeften Thijs van Herpt Jana V van Vliet-Ostaptchouk G Bragi Walters Michael N Weedon Cisca Wijmenga Jacqueline Witteman Richard N Bergman Stephane Cauchi Francis S Collins Anna L Gloyn Ulf Gyllensten Torben Hansen Winston A Hide Graham A Hitman Albert Hofman David J Hunter Kristian Hveem Markku Laakso Andrew D Morris Colin N A Palmer Igor Rudan Eric Sijbrands Lincoln D Stein Jaakko Tuomilehto Andre Uitterlinden Mark Walker Richard M Watanabe Goncalo R Abecasis Bernhard O Boehm Harry Campbell Mark J Daly Andrew T Hattersley Oluf Pedersen Inês Barroso Leif Groop Rob Sladek Unnur Thorsteinsdottir James F Wilson Thomas Illig Philippe Froguel Cornelia M van Duijn Kari Stefansson David Altshuler Michael Boehnke Mark I McCarthy Nicole Soranzo Eleanor Wheeler Nicole L Glazer Nabila Bouatia-Naji Reedik Mägi Joshua Randall Paul Elliott Denis Rybin Abbas Dehghan Jouke Jan Hottenga Kijoung Song Anuj Goel Taina Lajunen Alex Doney Christine Cavalcanti-Proença Meena Kumari Nicholas J Timpson Carina Zabena Erik Ingelsson Ping An Jeffrey O'Connell Jian'an Luan Amanda Elliott Steven A McCarroll Rosa Maria Roccasecca François Pattou Praveen Sethupathy Yavuz Ariyurek Philip Barter John P Beilby Yoav Ben-Shlomo Sven Bergmann Murielle Bochud Amélie Bonnefond Knut Borch-Johnsen Yvonne Böttcher Eric Brunner Suzannah J Bumpstead Yii-Der Ida Chen Peter Chines Robert Clarke Lachlan J M Coin Matthew N Cooper Laura Crisponi Ian N M Day Eco J C de Geus Jerome Delplanque Annette C Fedson Antje Fischer-Rosinsky Nita G Forouhi Maria Grazia Franzosi Pilar Galan Mark O Goodarzi Jürgen Graessler Scott Grundy Rhian Gwilliam Göran Hallmans Naomi Hammond Xijing Han Anna-Liisa Hartikainen Caroline Hayward Simon C Heath Serge Hercberg David R Hillman Aroon D Hingorani Jennie Hui Joe Hung Marika Kaakinen Jaakko Kaprio Y Antero Kesaniemi Mika Kivimaki Beatrice Knight Seppo Koskinen Peter Kovacs Kirsten Ohm Kyvik G Mark Lathrop Debbie A Lawlor Olivier Le Bacquer Cécile Lecoeur Yun Li Robert Mahley Massimo Mangino María Teresa Martínez-Larrad Jarred B McAteer Ruth McPherson Christa Meisinger David Melzer David Meyre Braxton D Mitchell Sutapa Mukherjee Silvia Naitza Matthew J Neville Marco Orrù Ruth Pakyz Giuseppe Paolisso Cristian Pattaro Daniel Pearson John F Peden Nancy L Pedersen Andreas F H Pfeiffer Irene Pichler Ozren Polasek Danielle Posthuma Simon C Potter Anneli Pouta Michael A Province Nigel W Rayner Kenneth Rice Samuli Ripatti Fernando Rivadeneira Olov Rolandsson Annelli Sandbaek Manjinder Sandhu Serena Sanna Avan Aihie Sayer Paul Scheet Udo Seedorf Stephen J Sharp Beverley Shields Gunnar Sigurðsson Eric J G Sijbrands Angela Silveira Laila Simpson Andrew Singleton Nicholas L Smith Ulla Sovio Amy Swift Holly Syddall Ann-Christine Syvänen Anke Tönjes André G Uitterlinden Ko Willems van Dijk Dhiraj Varma Sophie Visvikis-Siest Veronique Vitart Nicole Vogelzangs Gérard Waeber Peter J Wagner Andrew Walley Kim L Ward Hugh Watkins Sarah H Wild Gonneke Willemsen Jaqueline C M Witteman John W G Yarnell Diana Zelenika Björn Zethelius Guangju Zhai Jing Hua Zhao M Carola Zillikens Ingrid B Borecki Pierre Meneton Patrik K E Magnusson David M Nathan Gordon H Williams Kaisa Silander Stefan R Bornstein Peter Schwarz Joachim Spranger Fredrik Karpe Alan R Shuldiner Cyrus Cooper Manuel Serrano-Ríos Lars Lind Lyle J Palmer Frank B Hu Paul W Franks Shah Ebrahim Michael Marmot W H Linda Kao Peter Paul Pramstaller Alan F Wright Michael Stumvoll Anders Hamsten Thomas A Buchanan Timo T Valle Jerome I Rotter Brenda W J H Penninx Dorret I Boomsma Antonio Cao Angelo Scuteri David Schlessinger Manuela Uda Aimo Ruokonen Marjo-Riitta Jarvelin Leena Peltonen Vincent Mooser Robert Sladek Kiran Musunuru Albert V Smith Andrew C Edmondson Ioannis M Stylianou Masahiro Koseki James P Pirruccello Daniel I Chasman Christopher T Johansen Sigrid W Fouchier Gina M Peloso Maja Barbalic Sally L Ricketts Joshua C Bis Mary F Feitosa Marju Orho-Melander Olle Melander Xiaohui Li Mingyao Li Yoon Shin Cho Min Jin Go Young Jin Kim Jong-Young Lee Taesung Park Kyunga Kim Xueling Sim Rick Twee-Hee Ong Damien C Croteau-Chonka Leslie A Lange Joshua D Smith Andreas Ziegler Weihua Zhang Robert Y L Zee John B Whitfield John R Thompson Ida Surakka Tim D Spector Johannes H Smit Juha Sinisalo James Scott Juha Saharinen Chiara Sabatti Lynda M Rose Robert Roberts Mark Rieder Alex N Parker Guillaume Pare Christopher J O'Donnell Markku S Nieminen Deborah A Nickerson Grant W Montgomery Wendy McArdle David Masson Nicholas G Martin Fabio Marroni Gavin Lucas Robert Luben Marja-Liisa Lokki Guillaume Lettre Lenore J Launer Edward G Lakatta Reijo Laaksonen Kirsten O Kyvik Inke R König Kay-Tee Khaw Lee M Kaplan Åsa Johansson A Cecile J W Janssens Wilmar Igl G Kees Hovingh Christian Hengstenberg Aki S Havulinna Nicholas D Hastie Tamara B Harris Talin Haritunians Alistair S Hall Leif C Groop Elena Gonzalez Nelson B Freimer Jeanette Erdmann Kenechi G Ejebe Angela Döring Anna F Dominiczak Serkalem Demissie Panagiotis Deloukas Ulf de Faire Gabriel Crawford Yii-der I Chen Mark J Caulfield S Matthijs Boekholdt Themistocles L Assimes Thomas Quertermous Mark Seielstad Tien Y Wong E-Shyong Tai Alan B Feranil Christopher W Kuzawa Herman A Taylor Stacey B Gabriel Hilma Holm Vilmundur Gudnason Ronald M Krauss Jose M Ordovas Patricia B Munroe Jaspal S Kooner Alan R Tall Robert A Hegele John J P Kastelein Eric E Schadt David P Strachan Muredach P Reilly Nilesh J Samani Heribert Schunkert L Adrienne Cupples Manjinder S Sandhu Paul M Ridker Daniel J Rader Sekar Kathiresan

PLoS Genet 2012 29;8(3):e1002607. Epub 2012 Mar 29.

Department of Epidemiology, Biostatistics, and Occupational Health, Jewish General Hospital, Lady Davis Institute, McGill University, Montreal, Canada.

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http://dx.doi.org/10.1371/journal.pgen.1002607DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3315470PMC
September 2012

Reconstructing DNA copy number by joint segmentation of multiple sequences.

BMC Bioinformatics 2012 Aug 16;13:205. Epub 2012 Aug 16.

Department of Statistics, University of California, Los Angeles, CA, USA.

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http://dx.doi.org/10.1186/1471-2105-13-205DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3534631PMC
August 2012

RECONSTRUCTING DNA COPY NUMBER BY PENALIZED ESTIMATION AND IMPUTATION.

Ann Appl Stat 2010 Dec;4(4):1749-1773

Department of Statistics University of California, Los Angeles Los Angeles, California 90095 USA

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http://projecteuclid.org/euclid.aoas/1294167797
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http://dx.doi.org/10.1214/10-AOAS357DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092301PMC
December 2010

Biological, clinical and population relevance of 95 loci for blood lipids.

Authors:
Tanya M Teslovich Kiran Musunuru Albert V Smith Andrew C Edmondson Ioannis M Stylianou Masahiro Koseki James P Pirruccello Samuli Ripatti Daniel I Chasman Cristen J Willer Christopher T Johansen Sigrid W Fouchier Aaron Isaacs Gina M Peloso Maja Barbalic Sally L Ricketts Joshua C Bis Yurii S Aulchenko Gudmar Thorleifsson Mary F Feitosa John Chambers Marju Orho-Melander Olle Melander Toby Johnson Xiaohui Li Xiuqing Guo Mingyao Li Yoon Shin Cho Min Jin Go Young Jin Kim Jong-Young Lee Taesung Park Kyunga Kim Xueling Sim Rick Twee-Hee Ong Damien C Croteau-Chonka Leslie A Lange Joshua D Smith Kijoung Song Jing Hua Zhao Xin Yuan Jian'an Luan Claudia Lamina Andreas Ziegler Weihua Zhang Robert Y L Zee Alan F Wright Jacqueline C M Witteman James F Wilson Gonneke Willemsen H-Erich Wichmann John B Whitfield Dawn M Waterworth Nicholas J Wareham Gérard Waeber Peter Vollenweider Benjamin F Voight Veronique Vitart Andre G Uitterlinden Manuela Uda Jaakko Tuomilehto John R Thompson Toshiko Tanaka Ida Surakka Heather M Stringham Tim D Spector Nicole Soranzo Johannes H Smit Juha Sinisalo Kaisa Silander Eric J G Sijbrands Angelo Scuteri James Scott David Schlessinger Serena Sanna Veikko Salomaa Juha Saharinen Chiara Sabatti Aimo Ruokonen Igor Rudan Lynda M Rose Robert Roberts Mark Rieder Bruce M Psaty Peter P Pramstaller Irene Pichler Markus Perola Brenda W J H Penninx Nancy L Pedersen Cristian Pattaro Alex N Parker Guillaume Pare Ben A Oostra Christopher J O'Donnell Markku S Nieminen Deborah A Nickerson Grant W Montgomery Thomas Meitinger Ruth McPherson Mark I McCarthy Wendy McArdle David Masson Nicholas G Martin Fabio Marroni Massimo Mangino Patrik K E Magnusson Gavin Lucas Robert Luben Ruth J F Loos Marja-Liisa Lokki Guillaume Lettre Claudia Langenberg Lenore J Launer Edward G Lakatta Reijo Laaksonen Kirsten O Kyvik Florian Kronenberg Inke R König Kay-Tee Khaw Jaakko Kaprio Lee M Kaplan Asa Johansson Marjo-Riitta Jarvelin A Cecile J W Janssens Erik Ingelsson Wilmar Igl G Kees Hovingh Jouke-Jan Hottenga Albert Hofman Andrew A Hicks Christian Hengstenberg Iris M Heid Caroline Hayward Aki S Havulinna Nicholas D Hastie Tamara B Harris Talin Haritunians Alistair S Hall Ulf Gyllensten Candace Guiducci Leif C Groop Elena Gonzalez Christian Gieger Nelson B Freimer Luigi Ferrucci Jeanette Erdmann Paul Elliott Kenechi G Ejebe Angela Döring Anna F Dominiczak Serkalem Demissie Panagiotis Deloukas Eco J C de Geus Ulf de Faire Gabriel Crawford Francis S Collins Yii-der I Chen Mark J Caulfield Harry Campbell Noel P Burtt Lori L Bonnycastle Dorret I Boomsma S Matthijs Boekholdt Richard N Bergman Inês Barroso Stefania Bandinelli Christie M Ballantyne Themistocles L Assimes Thomas Quertermous David Altshuler Mark Seielstad Tien Y Wong E-Shyong Tai Alan B Feranil Christopher W Kuzawa Linda S Adair Herman A Taylor Ingrid B Borecki Stacey B Gabriel James G Wilson Hilma Holm Unnur Thorsteinsdottir Vilmundur Gudnason Ronald M Krauss Karen L Mohlke Jose M Ordovas Patricia B Munroe Jaspal S Kooner Alan R Tall Robert A Hegele John J P Kastelein Eric E Schadt Jerome I Rotter Eric Boerwinkle David P Strachan Vincent Mooser Kari Stefansson Muredach P Reilly Nilesh J Samani Heribert Schunkert L Adrienne Cupples Manjinder S Sandhu Paul M Ridker Daniel J Rader Cornelia M van Duijn Leena Peltonen Gonçalo R Abecasis Michael Boehnke Sekar Kathiresan

Nature 2010 Aug;466(7307):707-13

Center for Statistical Genetics, Department of Biostatistics, University of Michigan, Ann Arbor, Michigan 48109, USA.

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http://dx.doi.org/10.1038/nature09270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3039276PMC
August 2010

Sparse Regulatory Networks.

Ann Appl Stat 2010 Jun;4(2):663-686

University of Southern California, Stanford University, University of Michigan and University of Michigan.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3102251PMC
June 2010

Variance component model to account for sample structure in genome-wide association studies.

Nat Genet 2010 Apr 7;42(4):348-54. Epub 2010 Mar 7.

Center for Statistical Genetics, Department of Biostatistics, University of Michigan, Ann Arbor, Michigan, USA.

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http://www.nature.com/articles/ng.548
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http://dx.doi.org/10.1038/ng.548DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092069PMC
April 2010

Robust discrimination between self and non-self neurites requires thousands of Dscam1 isoforms.

Nature 2009 Oct;461(7264):644-8

Department of Biological Chemistry, Howard Hughes Medical Institute, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California 90095, USA.

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http://dx.doi.org/10.1038/nature08431DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2836808PMC
October 2009

Markov Models for inferring copy number variations from genotype data on Illumina platforms.

Hum Hered 2009 1;68(1):1-22. Epub 2009 Apr 1.

Department of Biostatistics, University of California at Berkeley, Berkeley, CA 94720-7358, USA.

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http://dx.doi.org/10.1159/000210445DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2880724PMC
May 2009

Recurrent CNVs disrupt three candidate genes in schizophrenia patients.

Am J Hum Genet 2008 Oct;83(4):504-10

Department of Human Genetics, Radboud University Nijmegen Medical Centre, 6500 HB Nijmegen, The Netherlands.

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http://dx.doi.org/10.1016/j.ajhg.2008.09.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2561936PMC
October 2008

Large recurrent microdeletions associated with schizophrenia.

Nature 2008 Sep;455(7210):232-6

CNS Division, deCODE genetics, Sturlugata 8, IS-101 Reykjavík, Iceland.

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http://dx.doi.org/10.1038/nature07229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2687075PMC
September 2008

Clinical features and associated syndromes of mal de debarquement.

J Neurol 2008 Jul 30;255(7):1038-44. Epub 2008 May 30.

Dept. of Neurology, University of California, 710 Westwood Plaza, 951769, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1007/s00415-008-0837-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2820362PMC
July 2008

Bayesian Gaussian Mixture Models for High-Density Genotyping Arrays.

J Am Stat Assoc 2008 03;103(481):89-100

Departments of Human Genetics and Statistics, University of California, Los Angeles, CA 90095.

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http://dx.doi.org/10.1198/016214507000000338.DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3092390PMC
March 2008

Avoiding false discoveries in association studies.

Authors:
Chiara Sabatti

Methods Mol Biol 2007 ;376:195-211

Department of Human Genetics, UCLA School of Medicine, Los Angeles, CA, USA.

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http://link.springer.com/10.1007/978-1-59745-389-9_14
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http://dx.doi.org/10.1007/978-1-59745-389-9_14DOI Listing
December 2007

A dictionary model for haplotyping, genotype calling, and association testing.

Genet Epidemiol 2007 Nov;31(7):672-83

Department of Biomathematics, UCLA School of Medicine, Los Angeles, CA 90095-1766, USA.

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http://dx.doi.org/10.1002/gepi.20232DOI Listing
November 2007

A Bayesian approach to expression network component analysis.

Conf Proc IEEE Eng Med Biol Soc 2004 ;4:2933-6

Dept. of Stat. & Human Genetics, California Univ., Los Angeles, CA, USA.

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http://dx.doi.org/10.1109/IEMBS.2004.1403833DOI Listing
June 2007

Tag SNPs chosen from HapMap perform well in several population isolates.

Genet Epidemiol 2007 Apr;31(3):189-94

Center for Neurobehavioral Genetics, University of California, Los Angeles, California 90095-1761, USA.

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http://dx.doi.org/10.1002/gepi.20201DOI Listing
April 2007

Linkage disequilibrium and haplotype homozygosity in population samples genotyped at a high marker density.

Hum Hered 2006 30;62(4):175-89. Epub 2006 Oct 30.

Department of Statistics, UCLA, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1159/000096599DOI Listing
March 2007

Human genetics: variants in common diseases.

Nature 2007 Feb;445(7130):828-30

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http://dx.doi.org/10.1038/nature05568DOI Listing
February 2007

Inferring protein domain interactions from databases of interacting proteins.

Genome Biol 2005 19;6(10):R89. Epub 2005 Sep 19.

Department of Human Genetics, David Geffen School of Medicine, University of California Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1186/gb-2005-6-10-r89DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1257472PMC
December 2006

Volume measures for linkage disequilibrium.

BMC Genet 2006 Nov 17;7:54. Epub 2006 Nov 17.

Department of Statistics, University of Illinois at Urbana-Champaign, Champaign IL 61820, USA.

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http://bmcgenet.biomedcentral.com/articles/10.1186/1471-2156
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http://dx.doi.org/10.1186/1471-2156-7-54DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1665459PMC
November 2006

A generalized framework for network component analysis.

IEEE/ACM Trans Comput Biol Bioinform 2005 Oct-Dec;2(4):289-301

Electrical Engineering Department, University of California, Los Angeles, 420 Westwood Plaza, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1109/TCBB.2005.47DOI Listing
October 2006

Empirical bayes estimation of a sparse vector of gene expression changes.

Stat Appl Genet Mol Biol 2005 6;4:Article22. Epub 2005 Sep 6.

UCLA, USA.

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http://dx.doi.org/10.2202/1544-6115.1132DOI Listing
May 2006

Reconstructing ancestral haplotypes with a dictionary model.

J Comput Biol 2006 Apr;13(3):767-85

Department of Biomathematics, University of California, Los Angeles, CA 90095-1766, USA.

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http://dx.doi.org/10.1089/cmb.2006.13.767DOI Listing
April 2006

Bayesian sparse hidden components analysis for transcription regulation networks.

Bioinformatics 2006 Mar 20;22(6):739-46. Epub 2005 Dec 20.

Department of Human Genetics, UCLA, Los Angeles, CA 90095-7088, USA.

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http://dx.doi.org/10.1093/bioinformatics/btk017DOI Listing
March 2006

A genome-wide linkage scan of familial benign recurrent vertigo: linkage to 22q12 with evidence of heterogeneity.

Hum Mol Genet 2006 Jan 5;15(2):251-8. Epub 2005 Dec 5.

Department of Human Genetics, University of California, Los Angeles, 90095, USA.

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http://dx.doi.org/10.1093/hmg/ddi441DOI Listing
January 2006

Distribution and dynamics of Lamp1-containing endocytic organelles in fibroblasts deficient in BLOC-3.

J Cell Sci 2005 Nov 25;118(Pt 22):5243-55. Epub 2005 Oct 25.

Department of Human Genetics, University of California, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1242/jcs.02633DOI Listing
November 2005

Guidelines for association studies in Human Molecular Genetics.

Hum Mol Genet 2005 Sep 21;14(17):2481-3. Epub 2005 Jul 21.

Department of Psychiatry, UCLA Center for Neurobehavioral Genetics, Semel Institute for Neuroscience and Human Behavior, Los Angeles, CA 90095-1761, USA.

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http://dx.doi.org/10.1093/hmg/ddi251DOI Listing
September 2005

Vocabulon: a dictionary model approach for reconstruction and localization of transcription factor binding sites.

Bioinformatics 2005 Apr 27;21(7):922-31. Epub 2004 Oct 27.

Department of Human Genetics, UCLA Los Angeles, CA 90095-7088, USA.

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https://academic.oup.com/bioinformatics/article-lookup/doi/1
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http://dx.doi.org/10.1093/bioinformatics/bti083DOI Listing
April 2005

A novel mutation in KCNA1 causes episodic ataxia without myokymia.

Hum Mutat 2004 Dec;24(6):536

Department of Human Genetics, University of California, Los Angeles, California, USA.

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http://dx.doi.org/10.1002/humu.9295DOI Listing
December 2004

The use of pedigree, sib-pair and association studies of common diseases for genetic mapping and epidemiology.

Nat Genet 2004 Oct;36(10):1045-51

Center for Neurobehavioral Genetics, Neuropsychiatric Institute, Los Angeles, CA 90095, USA.

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http://www.nature.com/articles/ng1433
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http://dx.doi.org/10.1038/ng1433DOI Listing
October 2004

Network component analysis: reconstruction of regulatory signals in biological systems.

Proc Natl Acad Sci U S A 2003 Dec 12;100(26):15522-7. Epub 2003 Dec 12.

Departments of Chemical Engineering, University of California, Los Angeles, CA 90095, USA.

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http://dx.doi.org/10.1073/pnas.2136632100DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC307600PMC
December 2003

Global analysis of gene expression in neural progenitors reveals specific cell-cycle, signaling, and metabolic networks.

Dev Biol 2003 Sep;261(1):165-82

Department of Neurology, UCLA School of Medicine, 710 Westwood Plaza, Los Angeles, CA 90095-1769, USA.

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http://dx.doi.org/10.1016/s0012-1606(03)00274-4DOI Listing
September 2003

False discovery rate in linkage and association genome screens for complex disorders.

Genetics 2003 Jun;164(2):829-33

Department of Human Genetics and Statistics, University of California, Los Angeles 90095-7088, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1462572PMC
June 2003

The human phenome project.

Nat Genet 2003 May;34(1):15-21

Center for Neurobehavioral Genetics, Neuropsychiatric Institute, Gonda Building Room 3506, 695 Charles E. Young Drive South, Los Angeles, California 90095, USA.

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http://dx.doi.org/10.1038/ng0503-15DOI Listing
May 2003

Co-expression pattern from DNA microarray experiments as a tool for operon prediction.

Nucleic Acids Res 2002 Jul;30(13):2886-93

Department of Human Genetics and Statistics and Department of Chemical Engineering, University of California, Los Angeles, CA 90095, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC117043PMC
http://dx.doi.org/10.1093/nar/gkf388DOI Listing
July 2002

Homozygosity and linkage disequilibrium.

Genetics 2002 Apr;160(4):1707-19

Department of Human Genetics and Statistics, University of California, Los Angeles, California 90095-7088, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1462072PMC
April 2002

Thresholding rules for recovering a sparse signal from microarray experiments.

Math Biosci 2002 Mar;176(1):17-34

Department of Human Genetics, UCLA, 695 Charles Young Dr. South, Los Angeles, CA 90095-7088, USA.

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March 2002

An evaluation of tyramide signal amplification and archived fixed and frozen tissue in microarray gene expression analysis.

Nucleic Acids Res 2002 Jan;30(2):E4

Department of Neurology, Program in Neurogenetics, UCLA School of Medicine, 710 Westwood Plaza, Los Angeles, CA 90095-1769, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC99843PMC
http://dx.doi.org/10.1093/nar/30.2.e4DOI Listing
January 2002