Publications by authors named "Aristeidis Sotiras"

37Publications

Overall survival prediction in glioblastoma patients using structural magnetic resonance imaging (MRI): advanced radiomic features may compensate for lack of advanced MRI modalities.

J Med Imaging (Bellingham) 2020 May 9;7(3):031505. Epub 2020 Jun 9.

University of Pennsylvania, Perelman School of Medicine, Center for Biomedical Image Computing and Analytics, Richards Medical Research Laboratories, Philadelphia, PA, United States.

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http://dx.doi.org/10.1117/1.JMI.7.3.031505DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7282509PMC
May 2020

Approaches to Defining Common and Dissociable Neurobiological Deficits Associated With Psychopathology in Youth.

Biol Psychiatry 2020 Jul 23;88(1):51-62. Epub 2019 Dec 23.

Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania. Electronic address:

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http://dx.doi.org/10.1016/j.biopsych.2019.12.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7305976PMC
July 2020

Neurostructural Heterogeneity in Youths With Internalizing Symptoms.

Biol Psychiatry 2020 03 18;87(5):473-482. Epub 2019 Sep 18.

Department of Psychiatry, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania; Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, Pennsylvania.

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http://dx.doi.org/10.1016/j.biopsych.2019.09.005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7007843PMC
March 2020

Evidence for Dissociable Linkage of Dimensions of Psychopathology to Brain Structure in Youths.

Am J Psychiatry 2019 12 24;176(12):1000-1009. Epub 2019 Jun 24.

The Department of Psychiatry (Kaczkurkin, Moore, Calkins, Cieslak, Rosen, Ciric, Xia, Cui, Sharma, Wolf, Ruparel, Roalf, R.C. Gur, R.E. Gur, Satterthwaite) and the Department of Radiology (Sotiras, R.C. Gur, Davatzikos, R.E. Gur), Perelman School of Medicine, University of Pennsylvania, Philadelphia; the Department of Psychiatry, Lewis Katz School of Medicine, Temple University, Philadelphia (Park); the Department of Radiology, Washington University, St. Louis (Sotiras); the Emotion and Development Branch, Intramural Research Program, NIMH, Bethesda, Md. (Pine); the Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania, Philadelphia (Shinohara); and the Philadelphia Veterans Administration Medical Center, Philadelphia (R.C. Gur).

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http://dx.doi.org/10.1176/appi.ajp.2019.18070835DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6888993PMC
December 2019

APOE Effect on Amyloid-β PET Spatial Distribution, Deposition Rate, and Cut-Points.

J Alzheimers Dis 2019 ;69(3):783-793

Department of Pathology & Laboratory Medicine, Institute on Aging, Center for Neurodegenerative Disease Research, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

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http://dx.doi.org/10.3233/JAD-181282DOI Listing
September 2020

Precision diagnostics based on machine learning-derived imaging signatures.

Magn Reson Imaging 2019 12 6;64:49-61. Epub 2019 May 6.

Center for Biomedical Image Computing and Analytics, University of Pennsylvania, United States of America.

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http://dx.doi.org/10.1016/j.mri.2019.04.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6832825PMC
December 2019

White matter lesions: Spatial heterogeneity, links to risk factors, cognition, genetics, and atrophy.

Neurology 2018 09 3;91(10):e964-e975. Epub 2018 Aug 3.

From the Center for Biomedical Image Computing and Analytics (M.H., A.S., G.E., N.R.B., J.D., C.D.), Department of Neurology and Penn Memory Center (M.H., D.A.W.), and Department of Biostatistics and Epidemiology (H.S.), University of Pennsylvania, Philadelphia; Department of Psychiatry (M.H., D.J., H.J.G.), Institute for Community Medicine (M.H., H.V., W.H.), and Department of Neurology (U.S.), University of Greifswald, Germany; Department of Neurology (J.B.T.), Houston Methodist Hospital, TX; German Center for Neurodegenerative Diseases (W.H., H.J.G.), Rostock/Greifswald, Germany; and Laboratory of Behavioral Neuroscience (S.M.R.), National Institute on Aging, Baltimore, MD.

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http://dx.doi.org/10.1212/WNL.0000000000006116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6139818PMC
September 2018

MIDAS: Regionally linear multivariate discriminative statistical mapping.

Neuroimage 2018 07 7;174:111-126. Epub 2018 Mar 7.

Section for Biomedical Image Analysis, Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA, 19104, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2018.02.060DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5949280PMC
July 2018

Evaluation of non-negative matrix factorization of grey matter in age prediction.

Neuroimage 2018 06 6;173:394-410. Epub 2018 Mar 6.

Institute of Neuroscience and Medicine (INM-1, INM-7), Research Centre Juelich, Germany; Institute of Systems Neuroscience, Medical Faculty, Heinrich-Heine University Düsseldorf, Germany; Institute of Clinical Neuroscience and Medical Psychology, Heinrich-Heine University Düsseldorf, Düsseldorf, Germany. Electronic address:

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http://dx.doi.org/10.1016/j.neuroimage.2018.03.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5911196PMC
June 2018

Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features.

Sci Data 2017 09 5;4:170117. Epub 2017 Sep 5.

Center for Biomedical Image Computing and Analytics (CBICA), Perelman School of Medicine, University of Pennsylvania, Richards Medical Research Laboratories, Floor 7, 3700 Hamilton Walk, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/sdata.2017.117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5685212PMC
September 2017

Segmentation of Gliomas in Pre-operative and Post-operative Multimodal Magnetic Resonance Imaging Volumes Based on a Hybrid Generative-Discriminative Framework.

Brainlesion 2016 10 12;10154:184-194. Epub 2017 Apr 12.

Section of Biomedical Image Analysis, Perelman School of Medicine, Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, USA.

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http://dx.doi.org/10.1007/978-3-319-55524-9_18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5512606PMC
October 2016

Structured Outlier Detection in Neuroimaging Studies with Minimal Convex Polytopes.

Med Image Comput Comput Assist Interv 2016 Oct 2;9900:300-307. Epub 2016 Oct 2.

Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1007/978-3-319-46720-7_35DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5492184PMC
October 2016

Patterns of coordinated cortical remodeling during adolescence and their associations with functional specialization and evolutionary expansion.

Proc Natl Acad Sci U S A 2017 03 13;114(13):3527-3532. Epub 2017 Mar 13.

Center for Biomedical Image Computing and Analytics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104.

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http://dx.doi.org/10.1073/pnas.1620928114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5380071PMC
March 2017

Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease.

Authors:
Genevera I Allen Nicola Amoroso Catalina Anghel Venkat Balagurusamy Christopher J Bare Derek Beaton Roberto Bellotti David A Bennett Kevin L Boehme Paul C Boutros Laura Caberlotto Cristian Caloian Frederick Campbell Elias Chaibub Neto Yu-Chuan Chang Beibei Chen Chien-Yu Chen Ting-Ying Chien Tim Clark Sudeshna Das Christos Davatzikos Jieyao Deng Donna Dillenberger Richard J B Dobson Qilin Dong Jimit Doshi Denise Duma Rosangela Errico Guray Erus Evan Everett David W Fardo Stephen H Friend Holger Fröhlich Jessica Gan Peter St George-Hyslop Satrajit S Ghosh Enrico Glaab Robert C Green Yuanfang Guan Ming-Yi Hong Chao Huang Jinseub Hwang Joseph Ibrahim Paolo Inglese Anandhi Iyappan Qijia Jiang Yuriko Katsumata John S K Kauwe Arno Klein Dehan Kong Roland Krause Emilie Lalonde Mario Lauria Eunjee Lee Xihui Lin Zhandong Liu Julie Livingstone Benjamin A Logsdon Simon Lovestone Tsung-Wei Ma Ashutosh Malhotra Lara M Mangravite Taylor J Maxwell Emily Merrill John Nagorski Aishwarya Namasivayam Manjari Narayan Mufassra Naz Stephen J Newhouse Thea C Norman Ramil N Nurtdinov Yen-Jen Oyang Yudi Pawitan Shengwen Peng Mette A Peters Stephen R Piccolo Paurush Praveen Corrado Priami Veronica Y Sabelnykova Philipp Senger Xia Shen Andrew Simmons Aristeidis Sotiras Gustavo Stolovitzky Sabina Tangaro Andrea Tateo Yi-An Tung Nicholas J Tustison Erdem Varol George Vradenburg Michael W Weiner Guanghua Xiao Lei Xie Yang Xie Jia Xu Hojin Yang Xiaowei Zhan Yunyun Zhou Fan Zhu Hongtu Zhu Shanfeng Zhu

Alzheimers Dement 2016 06 11;12(6):645-53. Epub 2016 Apr 11.

School of Computer Science, Fudan University, Shanghai, Shanghai, China; Shanghai Key Lab of Intelligent Information Processing, Fudan University, Shanghai, Shanghai, China; Centre for Computational Systems Biology, Fudan University, Shanghai, China.

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http://dx.doi.org/10.1016/j.jalz.2016.02.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5474755PMC
June 2016

HYDRA: Revealing heterogeneity of imaging and genetic patterns through a multiple max-margin discriminative analysis framework.

Neuroimage 2017 01 23;145(Pt B):346-364. Epub 2016 Feb 23.

Section for Biomedical Image Analysis, Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2016.02.041DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5408358PMC
January 2017

Disentangling Disease Heterogeneity with Max-Margin Multiple Hyperplane Classifier.

Med Image Comput Comput Assist Interv 2015 Oct 18;9349:702-709. Epub 2015 Nov 18.

Center for Biomedical Image Computing and Analytics University of Pennsylvania Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1007/978-3-319-24553-9_86DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5511373PMC
October 2015

Finding imaging patterns of structural covariance via Non-Negative Matrix Factorization.

Neuroimage 2015 Mar 12;108:1-16. Epub 2014 Dec 12.

Section for Biomedical Image Analysis, Center for Biomedical Image Computing and Analytics, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1016/j.neuroimage.2014.11.045DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4357179PMC
March 2015

Deformable medical image registration: a survey.

IEEE Trans Med Imaging 2013 Jul 31;32(7):1153-90. Epub 2013 May 31.

Section of Biomedical Image Analysis, Center for Biomedical Image Computing and Analytics, Department of Radiology, University of Pennsylvania, Philadelphia, PA 19104, USA.

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http://dx.doi.org/10.1109/TMI.2013.2265603DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3745275PMC
July 2013

Deriving statistical significance maps for support vector regression using medical imaging data.

Int Workshop Pattern Recognit Neuroimaging 2013 ;2013:13-16

Section of Biomedical Image Analysis, Center for Biomedical Image Computing and Analytics, Department of Radiology, University of Pennsylvania, Philadelphia, USA.

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http://dx.doi.org/10.1109/PRNI.2013.13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4199337PMC
January 2013

Deformable medical image registration: setting the state of the art with discrete methods.

Annu Rev Biomed Eng 2011 Aug;13:219-44

Computer Aided Medical Procedures, Technische Universität München, Garching, Germany.

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http://dx.doi.org/10.1146/annurev-bioeng-071910-124649DOI Listing
August 2011

Simultaneous geometric--iconic registration.

Med Image Comput Comput Assist Interv 2010 ;13(Pt 2):676-83

Laboratoire MAS, Ecole Centrale de Paris, France.

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http://dx.doi.org/10.1007/978-3-642-15745-5_83DOI Listing
November 2010

DRAMMS: Deformable registration via attribute matching and mutual-saliency weighting.

Med Image Anal 2011 Aug 17;15(4):622-39. Epub 2010 Jul 17.

Section of Biomedical Image Analysis, University of Pennsylvania, 3600 Market St., Ste 380, Philadelphia, PA 19104, USA.

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http://linkinghub.elsevier.com/retrieve/pii/S136184151000094
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http://dx.doi.org/10.1016/j.media.2010.07.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3012150PMC
August 2011

Graphical models and deformable diffeomorphic population registration using global and local metrics.

Med Image Comput Comput Assist Interv 2009 ;12(Pt 1):672-9

Laboratoire des Mathématiques Appliquées aux Systèmes (MAS), Ecole Centrale de Paris, France.

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http://dx.doi.org/10.1007/978-3-642-04268-3_83DOI Listing
June 2010