314 results match your criteria strain kmm


sp. nov., isolated from seawater of the South Sea in the Republic of Korea.

Int J Syst Evol Microbiol 2021 Jul;71(7)

Cell Factory Research Centre, Korea Research Institute of Bioscience & Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.

A novel Gram-stain-negative, rod-shaped, aerobic, non-motile bacterial strain, designated M5A1M, was isolated from seawater collected from the South Sea of the Republic of Korea. Based on 16S rRNA gene sequence similarity, strain M5A1M was closely related to KMM 6038 (95.3 %), SW5 (95. Read More

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Taxonomic description of Pseudomonas rhizovicinus sp. nov., isolated from the rhizosphere of a desert shrub Haloxylon ammodendron.

Antonie Van Leeuwenhoek 2021 Jul 16. Epub 2021 Jul 16.

Center for Grassland Microbiome, State Key Laboratory of Grassland Agro-Ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, 730000, People's Republic of China.

A Gram-negative aerobic bacterium, strain M30-35, was isolated from the rhizosphere of Haloxylon ammodendron in Tengger desert, Gansu province, northwest China. Our previous research indicated that strain M30-35 can promote the growth of ryegrass (Lolium perenne L.). Read More

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gen. nov., sp. nov., a moderately halophilic bacterium isolated from bioturbated Red Sea mangrove sediment, and proposal of the novel family fam. nov.

Int J Syst Evol Microbiol 2021 Jul;71(7)

Biological and Environmental Sciences and Engineering Division (BESE), Red Sea Research Center (RSRC), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.

A strictly aerobic, Gram-stain-negative, non-motile, rod-shaped bacterium, designated strain R1DC9, was isolated from sediments of a mangrove stand on the Red Sea coast of Saudi Arabia via diffusion chamber cultivation. Strain R1DC9 grew at 20-40 °C (optimum, 37 °C), pH 6-10 (optimum, pH 8) and 3-11 % NaCl (optimum, 7-9 %) in the cultivation medium. The genome of R1DC9 was 4 661 901 bp long and featured a G+C content of 63. Read More

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Harenicola maris gen. nov., sp. nov. isolated from the Sea of Japan shallow sediments.

Arch Microbiol 2021 May 25. Epub 2021 May 25.

G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku, 159, Vladivostok, 690022, Russia.

A Gram-negative, non-motile bacterium КMM 3653 was isolated from a sediment sample from the Sea of Japan seashore, Russia. On the basis of the 16S rRNA gene sequence analysis the strain КMM 3653 was positioned within the family Rhodobacteraceae (class Alphaproteobacteria) forming a distinct lineage with the highest gene sequence similarities to the members of the genera Pacificibacter (95.2-94. Read More

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Devosia aurantiaca sp. nov., Isolated from Mountain Soil and Proposal of Albitalea gen. nov. to Replace the Illegitimate Prokaryotic Genus Name Geomonas Khan et al. 2020.

Curr Microbiol 2021 Jul 7;78(7):2548-2555. Epub 2021 May 7.

Department of Life Science, Chung-Ang University, 84, HeukSeok-Ro, Dongjak-Gu, Seoul, 06974, Republic of Korea.

Strain H239, a gram-negative, strictly aerobic, and oxidase-positive, and catalase-negative bacterium, was isolated from mountain soil in Gangwon-do of South Korea. Colonies were orange colored, and cells were motile rods with a single polar flagellum. Growth was observed between 25 and 30 °C (optimum, 30 °C), between pH 7. Read More

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Thalassobius aquimarinus sp. nov., isolated from the Sea of Japan seashore.

Arch Microbiol 2021 Aug 8;203(6):3201-3207. Epub 2021 Apr 8.

G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku, 159, Vladivostok, 690022, Russia.

An aerobic, Gram-negative, non-pigmented non-motile bacterium designed КMM 8518 was isolated from a seawater sampled from the Sea of Japan seashore. Strain КMM 8518 grew at 7-42 °C and in the presence of 1-7% NaCl. The phylogenetic analyses based on 16S rRNA gene and whole-genome sequences placed the novel strain КMM 8518 into the genus Thalassobius as a separate lineage. Read More

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sp. nov., a novel bacteriochlorophyll -containing bacterium.

Int J Syst Evol Microbiol 2019 Jun 4;71(3). Epub 2021 Mar 4.

Department of Biological Sciences, Tokyo Metropolitan University, 1-1 Minamiosawa, Hachioji, Tokyo, 192-0397, Japan.

A strictly aerobic, bacteriochlorophyll (BChl) -containing alphaproteobacterium, designated strain K6, was isolated from seawater around an aquaculture site in the Uwa Sea in Japan. The novel strain grew optimally at 30 °C at pH 7.0-7. Read More

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Pseudomonas lopnurensis sp. nov., an endophytic bacterium isolated from Populus euphratica at the ancient Ugan river.

Antonie Van Leeuwenhoek 2021 Apr 15;114(4):399-410. Epub 2021 Feb 15.

College of Life Science, Zhejiang University, Hangzhou, 310058, People's Republic of China.

A Gram-stain negative, aerobic, rod-shaped, motile by a single polar flagellum, non-spore-forming bacterium, designated strain AL-54, was isolated from the storage liquid in the stems of Populus euphratica tree at the ancient Ugan River in Xinjiang, PR China. Isolated AL-54 grew optimally at pH 7.0 and temperature 35 °C in the presence of 3% (w/v) NaCl. Read More

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sp. nov., an amylase-producing bacterium of the family isolated from marine water in India.

Int J Syst Evol Microbiol 2019 Jun 27;71(3). Epub 2021 Jan 27.

MTCC-Microbial Type Culture Collection & Gene Bank, CSIR-Institute of Microbial Technology, Chandigarh 160036, India.

A novel Gram-stain-negative, curved rod-shaped, 0.5-0.7 µm wide and 3. Read More

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sp. nov., a pathogen causing soft rot of onion in Japan.

Int J Syst Evol Microbiol 2021 Jan 3;71(1). Epub 2020 Dec 3.

Genetic Resources Center, National Agriculture and Food Research Organization (NARO), 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan.

Six phytopathogenic bacterial strains, MAFF 301512, MAFF 301513, MAFF 301514, MAFF 301515, MAFF 301516 and MAFF 301517, were isolated from soft rot lesions of onion ( L.) in Japan. The cells were Gram-reaction-negative, aerobic, non-spore-forming, motile with one or two polar flagella and rod-shaped. Read More

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January 2021

sp. nov., a marine bacterium isolated from the brown alga .

Int J Syst Evol Microbiol 2021 Jan 3;71(1). Epub 2020 Dec 3.

Southern Marine Science and Engineering Guangdong Laboratory, Guangzhou, 511458, PR China.

A Gram-negative, aerobic, rod-shaped, non-flagellated and motile by gliding bacterium HL2-2, was isolated from the surface of the brown alga in China. The 16S rRNA gene sequence analysis showed that this strain was affiliated with the genus in the family and presented great similarity with the type strain KMM 6491 (97.9 % sequence similarity). Read More

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January 2021

Genomic Features of a Food-Derived Strain PAEM and Biofilm-Associated Gene Expression under a Marine Bacterial α-Galactosidase.

Int J Mol Sci 2020 Oct 16;21(20). Epub 2020 Oct 16.

Basic Department of Bioeconomy and Food Security, School of Economics and Management, Far Eastern Federal University, 690090 Vladivostok, Russia.

The biofilm-producing strains of colonize various surfaces, including food products and industry equipment that can cause serious human and animal health problems. The biofilms enable microorganisms to evolve the resistance to antibiotics and disinfectants. Analysis of the strain (serotype O6, sequence type 2502), isolated from an environment of meat processing (PAEM) during a ready-to-cook product storage (-20 °C), showed both the mosaic similarity and differences between free-living and clinical strains by their coding DNA sequences. Read More

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October 2020

Arenibacter lacus sp. nov., Isolated from Chilika Lagoon, India.

Curr Microbiol 2020 Dec 21;77(12):4152-4159. Epub 2020 Sep 21.

Department of Plant Sciences, School of Life Sciences, University of Hyderabad, P.O. Central University, Hyderabad, 500046, India.

A shiny dark yellow pigmented, Gram-stain-negative, rod-shaped, non-motile bacterium, designated as strain JC631, was isolated from the sediment ecosystem of Chilika lagoon, India. Strain JC631 tolerates up to pH 10 and NaCl up to 3% (w/v). MK6 is the only respiratory quinone. Read More

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December 2020

gen. nov., sp. nov., isolated from deep sea hydrothermal sulfide in the northwest Indian Ocean, and proposal to reclassify as comb. nov.

Int J Syst Evol Microbiol 2020 Oct 4;70(10):5488-5496. Epub 2020 Sep 4.

School of Marine Sciences, Ningbo University, Ningbo 315211, PR China.

A novel Gram-stain-negative, non-motile, strictly aerobic, rod-shaped bacterium was isolated from deep-sea hydrothermal sulfide in the northwest Indian Ocean Ridge and designated as strain IOP_32. Strain IOP_32 could grow at 4-40 °C (optimum, 37 °C), pH 5-9 (optimum, pH 7-8) and salinity of 0-12 % NaCl (w/v; optimum, 2-3 %). The 16S rRNA gene sequence of strain IOP_32 is most similar to EM7, RA3-3-1, KMM 6029 and S9_10 with 95. Read More

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October 2020

gen. nov., sp. nov., a member of the family isolated from a deep-sea seamount.

Int J Syst Evol Microbiol 2020 Aug;70(8):4569-4575

Center for Ocean Mega-Science, Chinese Academy of Sciences, 7 Nanhai Road, Qingdao, 266071, PR China.

The Gram-stain-negative, orange-pigmented, non-spore-forming, non-motile, strictly aerobic, rod-shaped bacterial strain, designated TP-CH-4, was isolated from a seamount near the Yap Trench in the tropical western Pacific. The optimal growth conditions were determined to be at pH 7-8, 25-30 °C and in the presence of 2 % (w/v) NaCl. The major respiratory quinone was MK-6. Read More

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sp. nov., isolated from the biofilm of a stone from the North Sea.

Int J Syst Evol Microbiol 2020 Jul;70(7):4305-4314

Christian-Albrechts-University (CAU) of Kiel, Kiel, Germany.

A new member of the family was isolated from the biofilm of a stone at Nordstrand, a peninsula at the German North Sea shore. Phylogenetic analysis of the 16S rRNA gene sequence showed that strain ANORD1 was most closely related to the validly described type strains LNM-20 (97.0 %) and KMM 6386 (96. Read More

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gen. nov., sp. nov., isolated from the starfish and reclassification of as a member of the genus comb. nov.

Int J Syst Evol Microbiol 2020 Jul;70(7):4119-4129

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Tsukisamu-Higashi, Toyohira-ku, Sapporo 062-8517, Japan.

A marine strain, designated KK4, was isolated from the surface of a starfish, , which was collected from seawater off the coast of Hokkaido, Japan. Strain KK4 is a Gram-stain-negative, non-spore-forming, rod-shaped, aerobic bacterium that forms yellow-pigmented colonies. A phylogenetic relationship analysis, based on 16S rRNA gene sequences, revealed that strain KK4 was closely related to IMCC12008, IMCC3101 and KMM 3912, with similarities of 96. Read More

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sp. nov., isolated from mangrove sediment.

Int J Syst Evol Microbiol 2020 Mar;70(3):1503-1507

Institute of Tropical Biosciences and Biotechnology, Key Laboratory of Biology and Genetic Resources of Tropical Crops of Ministry of Agriculture, Chinese Academy of Tropical Agricultural Sciences, Haikou 571101, Hainan, PR China.

A Gram-variable, aerobic, motile and irregular rod-shaped bacterium, designated HB172195, was isolated from a mangrove sediment sample collected from Bamen Bay mangrove forest, China. Cells of the strain were oxidase-negative but positive for catalase and nitrate reduction. Strain HB172195 was found to grow at 15-50 °C (optimum, 25-40 °C), pH 5. Read More

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Isolation and Characterisation of the Agarolytic Bacterium .

Open Life Sci 2019 Jan 31;14:588-594. Epub 2019 Dec 31.

King Faisal University, Hofuf Saudi Arabia.

Agar is a polysaccharide that primarily constitutes the cell wall of red algae. It is a good source of carbon and energy for many microbes. In the present study, an agarolytic bacterium, UQAD-3, was obtained from the waters of Al-Uqair, the Arabian Gulf, Al-Ahsaa, Saudi Arabia. Read More

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January 2019

Rheinheimera pleomorphica sp. nov., a Novel Alkali-Tolerant Bacteria Isolated from Chilika Lake, India.

Curr Microbiol 2020 Jan 8;77(1):158-165. Epub 2019 Nov 8.

School of Biotechnology, KIIT University, Bhubaneswar, Odisha, 751024, India.

A novel Gram-negative gamma-proteobacterium, non-sporulating motile, rod or coccus-shaped bacterium designated as strain PKS7 was isolated from a sediment sample collected from Chilika Lake, Odisha, India and characterized taxonomically using a polyphasic approach. The major quinone was Q8 and major cellular fatty acids were C, C, Cw8c Cw8c, C3-OH. The chemotaxonomic features confirmed the isolate to be a member of genus Rheinheimera. Read More

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January 2020

sp. nov., isolated from soil sampled at Fildes Peninsula, Antarctica.

Int J Syst Evol Microbiol 2019 Dec;69(12):3702-3709

China Center for Type Culture Collection (CCTCC), College of Life Sciences, Wuhan University, Wuhan 430072, PR China.

Strain YZ-8, isolated from soil sampled at Fildes Peninsula, Antarctica, was found to be a Gram-stain-negative, yellow-pigmented, oxidase- and catalase-positive, non-motile, non-spore-forming, rod-shaped and aerobic bacterium. Strain YZ-8 grewoptimally at pH 7.0 and 20 °C. Read More

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December 2019

Use of a flor yeast strain for the second fermentation of sparkling wines: Effect of endogenous CO over-pressure on the volatilome.

Food Chem 2020 Mar 10;308:125555. Epub 2019 Oct 10.

Department of Microbiology, Severo Ochoa (C6) Building, Agrifood Campus of International Excellence CeiA3, University of Cordoba, Ctra. N-IV-A, kmm 396, 14014 Cordoba, Spain.

Saccharomyces cerevisiae flor yeast is used for the first time in sparkling wine-making. Twenty-six oenological variables and fifty-three volatile metabolites are quantified in the middle (P = 3 bar) and at the end (P = 6 bar) of the second fermentation, carried out in open and closed bottles. A heat-map of volatiles and the fingerprints obtained for ten chemical families and ten odorant series visualize the changes for each condition. Read More

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sp. nov., isolated from seawater adjacent to Fildes Peninsula, Antarctica.

Int J Syst Evol Microbiol 2019 Nov;69(11):3414-3419

Anhui Provincial Engineering Technology Research Center of Microorganisms and Biocatalysis, Hefei, Anhui 230601, PR China.

A Gram-negative bacterium, namely strain ANRC-JHZ47, was isolated from a seawater sample collected at Biological Bay, Fildes Peninsula, Antarctica. Cells of strain ANRC-JHZ47 were rod-shaped and motile by a single polar flagellum. Strain ANRC-JHZ47 was aerobic, oxidase-negative, and catalase-positive. Read More

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November 2019

Pontibacter oryzae sp. nov., a carotenoid-producing species isolated from a rice paddy field.

Antonie Van Leeuwenhoek 2019 Nov 4;112(11):1705-1713. Epub 2019 Jul 4.

Department of Life Science, Dongguk University-Seoul, Goyang, 10326, South Korea.

A taxonomic study using a polyphasic approach was performed on a Gram-stain negative, red-pink, aerobic, non-motile, asporogenous, rod-shaped bacterium, designated strain KIRAN, isolated from soil collected from a rice paddy field. The 16S rRNA gene sequence analysis showed that strain KIRAN is phylogenetically related to Pontibacter actiniarum KMM 6156, Pontibacter korlensis X14-1, Pontibacter odishensis JC130, Pontibacter litorisediminis YKTF-7 and Pontibacter aurantiacus NP1 (97.6, 97. Read More

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November 2019

Devosia naphthalenivorans sp. nov., isolated from East Pacific Ocean sediment.

Int J Syst Evol Microbiol 2019 Jul 2;69(7):1974-1979. Epub 2019 May 2.

College of Biological and Environmental Sciences, Zhejiang Wanli University, Ningbo 315100, PR China.

A Gram-stain-negative bacterium, designated CM5-1, was isolated from a sediment sample collected from the East Pacific Ocean. 16S rRNA gene sequence analysis revealed that strain CM5-1 belongs to the genus Devosia, with closely related type strains Devosia submarina KMM 9415 (98.6 %), Devosia psychrophilaCr7-05 (98. Read More

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Characterization of Labrenzia polysiphoniae sp. nov. isolated from red alga Polysiphonia sp.

Arch Microbiol 2019 Jul 27;201(5):705-712. Epub 2019 Feb 27.

Zhirmunsky Institute of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, Vladivostok, 690041, Russia.

A group of five Gram-negative aerobic halophilic bacteria was isolated from the red alga Polysiphonia sp. specimen collected from the Sea of Japan seashore and subjected to a taxonomic study. On the basis of 16S rRNA gene sequence analysis, the novel isolates were affiliated to the genus Labrenzia sharing the highest gene sequence similarities of 98. Read More

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Tamlana carrageenivorans sp. nov., a carrageenan-degrading bacterium isolated from seawater.

Int J Syst Evol Microbiol 2019 May 26;69(5):1355-1360. Epub 2019 Feb 26.

National Marine Biodiversity Institute of Korea, 75, Jangsan-ro, 101 beon-gil, Janghang-eup, Seocheon-gun, Chungcheongnam-do, 33662, Republic of Korea.

A Gram-stain-negative, aerobic, non-motile, rod-shaped, agarolytic and carrageenolytic bacterial strain, designated UJ94, was isolated from seawater of Uljin in the Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain UJ94 shared sequence similarities of 98.4, 96. Read More

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Lottiidibacillus patelloidae gen. nov., sp. nov., isolated from the intestinal tract of a marine limpet and reclassification of Bacillus taeanensis as Maribacillus taeanensis gen. nov., comb. nov.

Antonie Van Leeuwenhoek 2019 May 1;112(5):797-807. Epub 2019 Jan 1.

State Key Laboratory Breeding Base of Marine Genetic Resources; Key Laboratory of Marine Genetic Resources, State Oceanic Administration; Fujian Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, SOA, Xiamen, 361005, China.

A taxonomic study was carried out on strain SA5d-4, which was isolated from a marine limpet (Patelloida saccharina lanx [Reeve, 1855]) collected from intertidal rocks in Xiamen, China. Strain SA5d-4 was aerobic, Gram-positive, lacked flagellum, non-motile, filamentous, formed a slightly-yellowish colony, and non-sporulating. The strain grew optimally at 28 °C, at pH values 7. Read More

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Winogradskyella algae sp. nov., a marine bacterium isolated from the brown alga.

Antonie Van Leeuwenhoek 2019 May 5;112(5):731-739. Epub 2018 Dec 5.

G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku, 159, Vladivostok, Russia, 690022.

An aerobic, Gram-negative, yellow-pigmented non-motile rod-shaped bacterium Kr9-9 was isolated from a brown alga specimen collected near the Kuril Islands. Based on the 16S rRNA gene sequence analysis strain Kr9-9 was assigned to the genus Winogradskyella, and its close phylogenetic neighbors were found to be Winogradskyella damuponensis KCTC 23552, Winogradskyella sediminis LMG 28075, and Winogradskyella rapida CCUG 59098 showing high similarities of 98.1%, 97. Read More

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Winogradskyella profunda sp. nov. isolated from the Chukchi Sea bottom sediments.

Arch Microbiol 2019 Jan 5;201(1):45-50. Epub 2018 Sep 5.

G.B. Elyakov Pacific Institute of Bioorganic Chemistry, Far Eastern Branch, Russian Academy of Sciences, Prospect 100 Let Vladivostoku, 159, Vladivostok, 690022, Russia.

An aerobic, Gram-negative, yellow-pigmented non-motile rod-shaped bacterium, designated Ch38, was isolated from a sediment sample collected from the Chukchi Sea in the Arctic Ocean. Comparative 16S rRNA gene sequence analysis positioned strain Ch38 into the genus Winogradskyella as a distinct line adjacent to Winogradskyella multivorans KCTC 23891, sharing the highest similarities of 97.5%, 97. Read More

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January 2019