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    Paucibacter aquatile sp. nov. isolated from freshwater of the Nakdong River, Republic of Korea.
    Arch Microbiol 2018 Feb 21. Epub 2018 Feb 21.
    Freshwater Bioresources Culture Research Bureau, Nakdonggang National Institute of Biological Resources (NNIBR), 137, Donam 2-gil, Sangju-si, Gyeongsangbuk-do, 37242, Republic of Korea.
    A Gram-negative, aerobic, motile, and rod-shaped bacterial strain designated CR182was isolated from freshwater of the Nakdong River, Republic of Korea. Optimal growth conditions for this novel strain were found to be: 25-30 °C, pH 6.5-8. Read More

    Varying susceptibility of clinical and environmental Scedosporium isolates to chemical oxidative stress in conidial germination.
    Arch Microbiol 2018 Feb 20. Epub 2018 Feb 20.
    Groupe d'Etude des Interactions Hôte-Pathogène (EA 3142), Institut de Biologie en Santé-IRIS, CHU, UNIV Angers, UNIV Brest, Université Bretagne-Loire, 4 rue Larrey, 49933, Angers, France.
    Scedosporium species are opportunistic pathogens causing a great variety of infections in both immunocompetent and immunocompromised individuals. The Scedosporium genus ranks the second among the filamentous fungi colonizing the airways of patients with cystic fibrosis (CF), after Aspergillus fumigatus, and most species are capable to chronically colonize the respiratory tract of these patients. Nevertheless, few data are available regarding evasion of the inhaled conidia to the host immune response. Read More

    Taxonomic structure and function of seed-inhabiting bacterial microbiota from common reed (Phragmites australis) and narrowleaf cattail (Typha angustifolia L.).
    Arch Microbiol 2018 Feb 17. Epub 2018 Feb 17.
    School of Resources and Environmental Engineering, Anhui University, Hefei, 230601, China.
    The present study investigated the endophytic bacterial communities in the seeds of mature, natural common reed (Phragmites australis) and narrowleaf cattail (Typha angustifolia L.). Additionally, seed endophytic bacterial communities were compared with rhizospheric and root endophytic bacterial communities using Illumina-based sequencing. Read More

    Genotyping of Candidatus Syngnamydia salmonis (chlamydiales; Simkaniaceae) co-cultured in Paramoeba perurans (amoebozoa; Paramoebidae).
    Arch Microbiol 2018 Feb 17. Epub 2018 Feb 17.
    Department of Biology, University of Bergen, Thormohlensgt 55, 5020, Bergen, Norway.
    Candidatus Syngnamydia salmonis (Chlamydiales, Simkaniaceae) was described as an epitheliocystis-causing bacterium from the gills of Atlantic salmon (Salmo salar) in Norway. A bacterium showing 99.2% 16S rRNA identity to Cand. Read More

    Aquincola amnicola sp. nov., isolated from a freshwater river.
    Arch Microbiol 2018 Feb 13. Epub 2018 Feb 13.
    Department of Marine Biotechnology, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung, 811, Taiwan.
    Strain TTM-94, isolated from a water sample taken from the Caohu River in Taiwan, was characterized using a polyphasic taxonomic approach. Cells of strain TTM-94were Gram-staining-negative, aerobic, poly-β-hydroxybutyrate-accumulating, motile by a single polar flagellum, short rod-shaped and surrounded by a thick capsule and it formed cream colored colonies. Growth occurred at 20-30 °C (optimum, 30 °C), at pH 6. Read More

    An overview of lectin-glycan interactions: a key event in initiating fungal infection and pathogenesis.
    Arch Microbiol 2018 Feb 13. Epub 2018 Feb 13.
    Department of Studies in Biochemistry, Karnatak University, Dharwad, India.
    Infections due to microfungi are of serious concern in many parts of the world. Many species of microfungi are known to cause systemic infection in human beings. Pathogenic microorganisms employ various molecular strategies for colonizing a susceptible host. Read More

    Draft genome of the fungicidal biological control agent Burkholderia anthina strain XXVI.
    Arch Microbiol 2018 Feb 10. Epub 2018 Feb 10.
    Centro de Investigación y de Estudios Avanzados-IPN (CINVESTAV), Irapuato, Guanajuato, Mexico.
    Burkholderia anthina XXVI is a rhizosphere bacterium isolated from a mango orchard in Mexico. This strain has a significant biological control activity against the causal agent of mango anthracnose, Colletotrichum gloeosporioides, likely through the production of siderophores and other secondary metabolites. Here, we present a draft genome sequence of B. Read More

    New insights into the metabolic potential of the phototrophic purple bacterium Rhodopila globiformis DSM 161from its draft genome sequence and evidence for a vanadium-dependent nitrogenase.
    Arch Microbiol 2018 Feb 8. Epub 2018 Feb 8. GbR, 24113, Kiel, Germany.
    Rhodopila globiformis: is the most acidophilic anaerobic anoxygenic phototrophic purple bacterium and was isolated from a warm acidic sulfur spring in Yellowstone Park. Its genome is larger than genomes of other phototrophic purple bacteria, containing 7248 Mb with a G + C content of 67.1% and 6749 protein coding and 53 RNA genes. Read More

    Polynucleotide phosphorylase is involved in the control of lipopeptide fengycin production in Bacillus subtilis.
    Arch Microbiol 2018 Feb 8. Epub 2018 Feb 8.
    Université de Lille, INRA, Université d'Artois, Université du Littoral-Côte d'Opale, EA 7394 - ICV-Institut Charles Viollette, F-59000, Lille, France.
    Bacillus subtilis is a wealth source of lipopeptide molecules such as iturins, surfactins and fengycins or plipastatins endowed with a range of biological activities. These molecules, designated secondary metabolites, are synthesized via non-ribosomal peptides synthesis (NRPS) machinery and are most often subjected to a complex regulation with involvement of several regulatory factors. To gain novel insights on mechanism regulating fengycin production, we investigated the effect of the fascinating polynucleotide phosphorylase (PNPase), as well as the effect of lipopeptide surfactin. Read More

    Colistin causes profound morphological alteration but minimal cytoplasmic membrane perforation in populations of Escherichia coli and Pseudomonas aeruginosa.
    Arch Microbiol 2018 Feb 8. Epub 2018 Feb 8.
    School of Pharmacy and Life Sciences, Robert Gordon University, Sir Ian Wood Building, Garthdee Road, Aberdeen, AB10 7GJ, UK.
    Whilst colistin (polymyxin E) represents the last mainstream treatment option for multidrug-resistant Gram-negative pathogens, details of its mechanism of action remain to be fully resolved. In this study, the effects of sub-inhibitory, inhibitory-bactericidal, and supra-bactericidal levels of colistin on the membrane integrity and morphology of Escherichia coli and Pseudomonas aeruginosa were investigated using potassium loss, flow cytometry, and scanning electron microscopy (SEM). Supra-bactericidal colistin concentrations induced just 4-12% intracellular potassium loss from bacteria after 24 h. Read More

    Bacteriocinogenic properties of Escherichia coli P2C isolated from pig gastrointestinal tract: purification and characterization of microcin V.
    Arch Microbiol 2018 Feb 7. Epub 2018 Feb 7.
    Dairy Research Center (STELA) and Department of Food Sciences, Institute of Nutrition and Functional Foods (INAF), Université Laval, Québec, QC, G1V 0A6, Canada.
    The aim of this study was to isolate and investigate the bacteriocinogenic and probiotic potential of new Gram-negative isolates. Of 22 bacterial isolates from pig intestine and chicken crops, ten isolates had demonstrated a good activity, and the most potent five strains were identified as four E. coli and one as Proteus sp. Read More

    Untapped bacterial diversity and metabolic potential within Unkeshwar hot springs, India.
    Arch Microbiol 2018 Feb 2. Epub 2018 Feb 2.
    National Collection of Industrial Microorganisms (NCIM), CSIR-National Chemical Laboratory, Pune, Maharashtra, 411008, India.
    Hot springs support diverse and interesting groups of microorganisms adapted to extreme conditions and gaining attention in biotechnological applications. However, due to limitations of cultivation methods, a majority of such extremophiles remain uncultivated and unexplored. The advent of multiple cultivation conditions and specialized culture media could possibly aid to access the unexplored microbial portion of hot springs. Read More

    Bradyrhizobium forestalis sp. nov., an efficient nitrogen-fixing bacterium isolated from nodules of forest legume species in the Amazon.
    Arch Microbiol 2018 Feb 2. Epub 2018 Feb 2.
    Setor de Biologia, Microbiologia e Processos Biológicos do Solo, Departamento de Ciência do Solo, Universidade Federal de Lavras, Campus UFLA, 37200-000, Lavras, Minas Gerais, Brazil.
    Three strains of nitrogen-fixing bacteria isolated from nodules of Inga sp. (INPA54B) and Swartzia sp. (INPA86A and INPA01-91A) in soils under native forest in the Brazilian Amazon were previously identified as belonging to the Bradyrhizobium genus. Read More

    Soil commensal rhizobia promote Rhizobium etli nodulation efficiency through CinR-mediated quorum sensing.
    Arch Microbiol 2018 Feb 1. Epub 2018 Feb 1.
    Department of Microbiology, College of Biological Sciences, Life Sciences College, Nanjing Agricultural University, Weigang No.1, Nanjing, 210095, Jiangsu, China.
    The rhizosphere microbiome is composed of diverse microorganisms directly interacting with plants and each other. We sought to achieve a better understanding of how rhizobia interact with other soil bacteria during the initial symbiosis period. In this study, we investigated how soil commensals, particularly other rhizobia, affect Rhizobium etli-Phaseolus vulgaris interactions. Read More

    Response of the respiratory mucosal cells to mycobacterium avium subsp. Hominissuis microaggregate.
    Arch Microbiol 2018 Jan 30. Epub 2018 Jan 30.
    Department of Biomedical Sciences, College of Veterinary Medicine, Oregon State University, 107B Dryden Hall, Corvallis, OR, 97331, USA.
    Mycobacterium avium: subsp. hominissuis (MAH) is an opportunistic pathogen that commonly infects immunocompromised individuals. Recently, we described an invasive phenotypic change MAH undergoes when incubated with lung airway epithelial host cells for 24 h, which is accompanied with microaggregate formation in vitro. Read More

    Bifunctional alanine dehydrogenase from the halotolerant cyanobacterium Aphanothece halophytica: characterization and molecular properties.
    Arch Microbiol 2018 Jan 29. Epub 2018 Jan 29.
    Department of Microbiology, Faculty of Science, Chulalongkorn University, Pathumwan, Bangkok, 10330, Thailand.
    A link between carbon and nitrogen metabolism is important for serving as metabolic ancillary reactions. Here, we identified and characterized the alanine dehydrogenase gene in Aphanothece halophytica (ApalaDH) that is involved in alanine assimilation/dissimilation. Functional analysis revealed that ApalaDH encodes a bifunctional protein catalyzing the reversible reaction of pyruvate to L-alanine via its pyruvate reductive aminase (PvRA) activity, the reaction of L-alanine to pyruvate via its alanine oxidative dehydrogenase activity, and the non-reversible reaction of glyoxylate to glycine via its glyoxylate reductive aminase (GxRA) activity. Read More

    Isolation and characterization of a novel bacteriophage infecting Vibrio alginolyticus.
    Arch Microbiol 2018 Jan 25. Epub 2018 Jan 25.
    Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research, Former American Base of Gournes, 71003, Heraklion, Crete, Greece.
    Vibrio alginolyticus is a common marine bacterium implicated in disease outbreaks in marine farmed fish and invertebrates. Due to the inappropriate use of antibiotics in aquaculture, alternative therapies have been proposed. One of the most promising options is the use of lytic bacteriophages to control pathogenic bacteria. Read More

    Biosynthetic and antimicrobial potential of actinobacteria isolated from bulrush rhizospheres habitat in Zhalong Wetland, China.
    Arch Microbiol 2018 Jan 24. Epub 2018 Jan 24.
    School of Biological Science and Biotechnology, University of Jinan, Jinan, China.
    The wetland ecosystem is known to possess unique vegetation and serves multiple functions within the environment. In this study, bacterial bioprospecting of bulrush rhizospheres in the Zhalong Wetland, China, was performed using comprehensive methods, including strain isolation and phylogenetic analysis, PCR detection of biosynthetic gene clusters, assessment of antimicrobial activity, metabolite profiling and genome analysis. A total of 27 actinobacterial strains were isolated, and their biosynthetic gene clusters (NRPS, PKS-I and PKS-II) were investigated; all of the tested strains had at least one of the three aforementioned biosynthetic gene clusters. Read More

    Limoniibacter endophyticus gen. nov., sp. nov., an alphaproteobacterium isolated from the roots of Limonium otolepis.
    Arch Microbiol 2018 Jan 22. Epub 2018 Jan 22.
    Key Laboratory of Biogeography and Bioresource in Arid Land, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Ürümqi, 830011, People's Republic of China.
    A Gram-negative bacterium, designated as strain YIM 690229, was isolated from the roots of Limonium otolepis. The strain was able to grow at 10-40 °C (optimum, 28-37 °C), pH 6.0-8. Read More

    Analysis of the succession of structure of the bacteria community in soil from long-term continuous cotton cropping in Xinjiang using high-throughput sequencing.
    Arch Microbiol 2018 Jan 19. Epub 2018 Jan 19.
    Xinjiang Key Laboratory of Special Species Conservation and Regulatory Biology, Xinjiang Normal University, Xinyi Road, Urumqi, 830054, China.
    The present study aimed to identify the structural succession of the bacteria community in soil during long-term continuous cotton cropping and its relationship with continuous cropping obstacles in Xinjiang, China. High-throughput sequencing was used to analyze and compare the composition of the bacterial community in the soil at the cotton root zone after years of continuous cotton cropping and crop rotation over 30 years of cultivation. Cotton cultivation increased the structural diversity of the bacterial community, among which the populations of Actinobacteria, Acidobacteria, Firmicutes, Nitrospirae, and Chloroflexi changed considerably. Read More

    Chitinophaga caseinilytica sp. nov., a casein hydrolysing bacterium isolated from forest soil.
    Arch Microbiol 2018 Jan 19. Epub 2018 Jan 19.
    Department of Life Science, College of Natural Sciences, Kyonggi University, Suwon, Gyeonggi-Do, 16227, South Korea.
    A novel casein hydrolysing bacterium designated strain S-52was isolated from Kyonggi University forest soil. Cells were strictly aerobic, Gram stain-negative, oxidase- and catalase- positive, non-motile, non-spore-forming, rod-shaped, and golden-yellow-pigmented. Strain S-52hydrolysed casein. Read More

    Characterization of multiple antilisterial peptides produced by sakacin P-producing Lactobacillus sakei subsp. sakei 2a.
    Arch Microbiol 2018 Jan 18. Epub 2018 Jan 18.
    Food Research Center, Departamento de Alimentos e Nutrição Experimental, Faculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, SP, Brazil.
    Antimicrobial compounds produced by lactic acid bacteria can be explored as natural food biopreservatives. In a previous report, the main antimicrobial compounds produced by the Brazilian meat isolate Lactobacillus sakei subsp. sakei 2a, i. Read More

    Nitrogen-fixation activity and the abundance and taxonomy of nifH genes in agricultural, pristine, and urban prairie stream sediments chronically exposed to different levels of nitrogen loading.
    Arch Microbiol 2018 Jan 15. Epub 2018 Jan 15.
    Department of Biological Sciences, Wichita State University, 1845 Fairmount, Wichita, KS, 67260, USA.
    Small streams exert great influences on the retention and attenuation of nitrogen (N) within stream networks. Human land use can lead to increased transport of dissolved inorganic N compounds and downstream eutrophication. Microbial activity in streams is important for maintaining an actively functioning N cycle. Read More

    Genomic characterization of key bacteriophages to formulate the potential biocontrol agent to combat enteric pathogenic bacteria.
    Arch Microbiol 2018 Jan 12. Epub 2018 Jan 12.
    Environmental Biotechnology and Genomics Division, CSIR-National Environmental Engineering Research Institute, Nagpur, 440020, India.
    Combating bacterial pathogens has become a global concern especially when the antibiotics and chemical agents are failing to control the spread due to its resistance. Bacteriophages act as a safe biocontrol agent by selectively lysing the bacterial pathogens without affecting the natural beneficial microflora. The present study describes the screening of prominent enteric pathogens NDK1, NDK2, NDK3, and NDK4 (Escherichia, Klebsiella, Enterobacter, and Serratia) mostly observed in domestic wastewater; against which KNP1, KNP2, KNP3, and KNP4 phages were isolated. Read More

    Mesorhizobium zhangyense sp. nov., isolated from wild Thermopsis lanceolate in northwestern China.
    Arch Microbiol 2017 Dec 26. Epub 2017 Dec 26.
    Department of Biology, University of York, York, YO10 5DD, UK.
    A Gram-stain-negative strain, 23-3-2, was isolated from a nodule of Thermopsis lanceolate grown in Northwest China. Phylogenetic analysis of 16S rRNA gene sequence showed that the strain was closely related to Mesorhizobium camelthorni CCNWXJ 40-4and M. alhagi CCNWXJ 12-2having 98. Read More

    Molecular diversity of Photorhabdus and Xenorhabdus bacteria, symbionts of Heterorhabditis and Steinernema nematodes retrieved from soil in Benin.
    Arch Microbiol 2017 Dec 21. Epub 2017 Dec 21.
    Department of Biochemistry and Microbiology, Faculty of Sciences, Ghent University, K. L. Ledeganckstraat 35, 9000, Ghent, Belgium.
    The diversity of 43 bacterial strains isolated from Beninese entomopathogenic nematodes was investigated molecularly by analyzing the 16S rRNA, recA, and gyrB genes. Based on 16S rRNA sequence analysis, 15 bacterial strains were identified as Xenorhabdus sp., 27 strains as Photorhabdus sp. Read More

    Chryseobacterium chungangensis sp. nov., a bacterium isolated from soil of sweet gourd garden.
    Arch Microbiol 2017 Dec 20. Epub 2017 Dec 20.
    Department of Food and Nutrition, College of Biotechnology and Natural Resource, Chung-Ang University, Anseong-si, Gyeonggi-do, 17546, Republic of Korea.
    A novel bacterial strain, named MAH-7, was isolated from a soil sample of a Korean sweet gourd garden and was characterized using a polyphasic approach. Cells were Gram-staining negative, orange colored, non-motile and rod shaped. The strain was aerobic and catalase, oxidase positive, optimum growth temperature and pH were 28-30 °C and 7. Read More

    Technological properties assessment and two component systems distribution of Streptococcus thermophilus strains isolated from fermented milk.
    Arch Microbiol 2017 Dec 13. Epub 2017 Dec 13.
    Institute of Microbiology, Heilongjiang Academy of Sciences, Harbin, 150010, People's Republic of China.
    Streptococcus thermophilus is one of the economically most representatives of lactic acid bacteria, which is widely used as a starter to produce fermented milk products. In this study, 22 S. thermophilus strains were isolated from 26 fermented milk samples. Read More

    UPLC-MS/MS analysis of antibiotics in pharmaceutical effluent in Tunisia: ecotoxicological impact and multi-resistant bacteria dissemination.
    Arch Microbiol 2017 Dec 11. Epub 2017 Dec 11.
    Research Unit of Analysis and Process Applied to the Environment, APAE UR17ES32 Higher Institute of Applied Sciences and Technology Mahdia "ISSAT", Monastir University, 5100, Monastir, Tunisia.
    The UPLC MS/MS analysis showed the presence of the two antibiotics in the pharmaceutical industry discharges during 3 months; norfloxacin and spiramycin which were quantified with the mean concentrations of 226.7 and 84.2 ng mL, respectively. Read More

    Genes involved in Beauveria bassiana infection to Galleria mellonella.
    Arch Microbiol 2017 Dec 6. Epub 2017 Dec 6.
    Jiangsu Key Laboratory of Food Resource Development and Quality Safety, Xuzhou University of Technology, Xuzhou, China.
    The ascomycete fungus Beauveria bassiana is a natural pathogen of hundreds of insect species and is commercially produced as an environmentally friendly mycoinsecticide. Many genes involved in fungal insecticide infection have been identified but few have been further explored. In this study, we constructed three transcriptomes of B. Read More

    Glucerabacter canisensis gen. nov., sp. nov., isolated from dog feces and its effect on the hydrolysis of plant glucosylceramide in the intestine of dogs.
    Arch Microbiol 2017 Dec 4. Epub 2017 Dec 4.
    Department of Life Science, Meiji University, Higashimita, Tama-ku, Kawasaki, 214-8571, Japan.
    A Gram-positive, obligately anaerobic, oval-rod shaped, non-spore-forming, and non-pigmented bacterium, designated strain NATH-2371(= JCM31739 = DSM105698), was isolated from dog feces. Comparative 16S rRNA gene sequence analysis revealed that strain NATH-2371belongs to Clostridium cluster XIVa, and the closest strains were Coprococcus comes ATCC 27758(94.8% 16S rRNA gene sequence similarity) and Clostridium nexile DSM 1787(94. Read More

    Epibiont growth on filamentous bacteria found in activated sludge: a morphological approach.
    Arch Microbiol 2017 Dec 2. Epub 2017 Dec 2.
    Institute for Water and Wastewater Technology, Durban University of Technology, Durban, Kwazulu Natal, 4001, South Africa.
    Occurrence of epibiont attachment on filamentous bacteria is a common phenomenon in activated sludge. In this study, an attempt has been made to elucidate the intrinsic nature of the attachment between the epibionts and filamentous bacteria based on microscopic observations. Characterization of the epiflora based on fluorescence in situ hybridization using group level probes revealed that the epibionts colonizing these filamentous bacteria largely belongs to the class Alphaproteobacteria, followed by Beta and Gammaproteobacteria. Read More

    The P-type ATPase CtpG preferentially transports Cdacross the Mycobacterium tuberculosis plasma membrane.
    Arch Microbiol 2017 Dec 2. Epub 2017 Dec 2.
    Chemistry Department, Faculty of Sciences, Universidad Nacional de Colombia, Carrera 30 No 45-03, Ciudad Universitaria, Bogotá, 111321, Colombia.
    P-type ATPases are involved in heavy metal transport across the plasma membrane. Some Mycobacterium tuberculosis P-type ATPases are induced during infection, suggesting that this type of transporter could play a critical role in mycobacterial survival. To date, the ion specificity of M. Read More

    Restriction enzyme-mediated insertional mutagenesis: an efficient method of Rosellinia necatrix transformation.
    Arch Microbiol 2018 Jan 2;200(1):189-194. Epub 2017 Dec 2.
    Faculty of Applied Sciences and Biotechnology, Shoolini University of Biotechnology and Management Sciences, Bajhol, Solan, Himachal Pradesh, 173229, India.
    Rosellinia necatrix: causing root rot disease is a very destructive pathogen of woody plants and is responsible for yield losses to a large number of fruit trees. The genetic analysis of this pathogen has not been picked up because of difficulty in generating mutations in Rosellinia necatrix for many reasons. A number of methods have been proposed for inducing mutations in Rosellinia necatrix but none of them proved worth because of very low transformation efficiencies. Read More

    Coralloluteibacterium stylophorae gen. nov., sp. nov., a new member of the family Lysobacteraceae isolated from the reef-building coral Stylophora sp.
    Arch Microbiol 2017 Nov 30. Epub 2017 Nov 30.
    Department of Marine Biotechnology, National Kaohsiung Marine University, No. 142, Hai-Chuan Rd. Nan-Tzu, Kaohsiung, 811, Taiwan, ROC.
    A bacterial strain, designated Sty a-1, was isolated from a reef-building coral Stylophora sp., collected off coast of Southern Taiwan and characterized using the polyphasic taxonomy approach. Cells of strain Sty a-1were Gram-staining-negative, aerobic, poly-β-hydroxybutyrate accumulating, motile by means of flagella, non-spore forming, straight rod-shaped and colonies were yellow and circular. Read More

    Decoding the role of hypothetical protein All3255 of Anabaena PCC7120 in heavy metal stress management in Escherichia coli.
    Arch Microbiol 2017 Nov 30. Epub 2017 Nov 30.
    Department of Botany, Mahatma Gandhi Central University, Motihari, Bihar, 845401, India.
    Cadmium is a non-essential toxic heavy metal for organisms, including plants and cyanobacteria. Cadmium resistance transporters involved in resistance of cells against various toxicants such as drugs and effluxes cytotoxic compounds from cells. However, cadmium resistance-associated protein (CadD) has never been reported from a diazotrophic cyanobacterium Anabaena sp. Read More

    Is Cr(III) toxic to bacteria: toxicity studies using Bacillus subtilis and Escherichia coli as model organism.
    Arch Microbiol 2017 Nov 30. Epub 2017 Nov 30.
    Chemical Laboratory, Council of Scientific and Industrial Research (CSIR)-Central Leather Research Institute (CLRI), Adyar, Chennai, 600 020, India.
    The objective of this work is to detect the mode of damage caused by Cr(III), one of the widely used industrial pollutant on Bacillus subtilis-industrial strain 168 and Escherichia coli MTCC 40. Bioassays are very sensitive, precise, economical and rapid for detecting early stages of pollution. The detrimental effect of trivalent chromium becomes clear from the growth profile and growth inhibition studies. Read More

    Citreibacter salsisoli gen. nov., sp. nov., a bacterium isolated from marine soil.
    Arch Microbiol 2017 Nov 29. Epub 2017 Nov 29.
    Department of Chemistry and Nano Science, Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul, 03760, Republic of Korea.
    A Gram-stain-negative, strictly aerobic, yellow-colored, rod-shaped, chemoheterotrophic bacterium, designated SNA426, was isolated from marine soil in the Republic of Korea. Preliminary analysis based on the 16S rRNA gene sequence revealed that the novel marine isolate was affiliated with the family Flavobacteriaceae of phylum Bacteroidetes and that it shared the highest (96.2%) sequence similarity with Gillisia mitskevichiae KMM 6034. Read More

    Lysobacter tongrenensis sp. nov., isolated from soil of a manganese factory.
    Arch Microbiol 2017 Nov 29. Epub 2017 Nov 29.
    State Key Laboratory of Agricultural Microbiology, College of Life Science and Technology, Huazhong Agricultural University, Wuhan, Hubei, 430070, People's Republic of China.
    A Gram-staining negative, aerobic, non-motile, rod-shaped bacterial strain, designated YS-37, was isolated from soil in a manganese factory, People's Republic of China. Based on16S rRNA gene sequence analysis, strain YS-37was most closely related to Lysobacter pocheonensis Gsoil 193(97.0%), Lysobacter dokdonensis DS-58(96. Read More

    Spirosoma jeollabukense sp. nov., isolated from soil.
    Arch Microbiol 2017 Nov 29. Epub 2017 Nov 29.
    School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
    A Gram-negative, non-motile, rod-shaped, aerobic bacterial strain, designated S2-3-6, was isolated from soil in Jeollabuk-do province, South Korea, and was characterized taxonomically using a polyphasic approach. According to a comparative 16S rRNA gene sequence analysis, strain S2-3-6belonged to the family Cytophagaceae and was most closely related to Spirosoma endophyticum EX36(98.2%), Spirosoma fluviale MSd3(96. Read More

    A review of metabolic potential of human gut microbiome in human nutrition.
    Arch Microbiol 2018 Mar 29;200(2):203-217. Epub 2017 Nov 29.
    Department of Biochemistry, Maharshi Dayanand University, Rohtak, Haryana, 124001, India.
    The human gut contains a plethora of microbes, providing a platform for metabolic interaction between the host and microbiota. Metabolites produced by the gut microbiota act as a link between gut microbiota and its host. These metabolites act as messengers having the capacity to alter the gut microbiota. Read More

    Gracilibacillus eburneus sp.nov., a moderately halophilic bacterium isolated from Xinjiang province, China.
    Arch Microbiol 2017 Nov 28. Epub 2017 Nov 28.
    Key Laboratory of Microbial Diversity in Southwest China, Ministry of Education, and Laboratory for Conservation and Utilization of Bio-resources, Yunnan Institute of Microbiology, Yunnan University, Kunming, 650091, People's Republic of China.
    A novel Gram-staining positive, moderately halophilic, endospore-forming, motile, rod-shaped and strictly aerobic strain, designated YIM 93565, was isolated from a salt lake in Xinjiang province of China and subjected to a polyphasic taxonomic study. Strain YIM 93565grew in the range of pH 6.0-9. Read More

    Virus-induced apoptosis and phosphorylation form of metacaspase in the marine coccolithophorid Emiliania huxleyi.
    Arch Microbiol 2017 Nov 28. Epub 2017 Nov 28.
    College of Food and Bioengineering, JiMei University, No. 43, Jiyuan Road, Xiamen, Fujian Province, 361021, China.
    Lytic viral infection and programmed cell death (PCD) are thought to represent two distinct death mechanisms in phytoplankton, unicellular photoautotrophs that drift with ocean currents. PCD (apoptosis) is mainly brought about by the activation of caspases, a protease family with unique substrate selectivity. Here, we demonstrated that virus infection induced apoptosis of marine coccolithophorid Emiliania huxleyi BOF92 involving activation of metacaspase. Read More

    The interaction of copper ions with Staphylococcus aureus, Pseudomonas aeruginosa, and Escherichia coli: an X-ray absorption near-edge structure (XANES) spectroscopy study.
    Arch Microbiol 2017 Nov 27. Epub 2017 Nov 27.
    Microbiology and Food Hygiene, Department of Food Sciences, Niederrhein University of Applied Sciences, Rheydter Strasse 277, 41065, Mönchengladbach, Germany.
    The antimicrobial properties of copper ions have been known for a long time. However, the exact mechanism of action of the transition metal on microorganisms has long been unclear. X-ray absorption near-edge structure (XANES) spectroscopy at the Cu K edge allows the determination of copper speciation in Staphylococcus aureus, Escherichia coli, and Pseudomonas aeruginosa that have been treated with Cu(II) and Cu(I) solutions. Read More

    Effect of Lactobacillus rhamnosus on the response of Galleria mellonella against Staphylococcus aureus and Escherichia coli infections.
    Arch Microbiol 2017 Nov 24. Epub 2017 Nov 24.
    Department of Biosciences and Oral Diagnosis, Laboratory of Microbiology and Immunology, Institute of Science and Technology, Paulista State University/UNESP, Av, Engenheiro Francisco José Longo, 777-Jardim São Dimas, São José dos Campos, SP, 12245-000, Brazil.
    This study evaluated the prophylactic effects of the live or heat-killed probiotic strain Lactobacillus rhamnosus ATCC 7469 in Galleria mellonella, inoculated with Staphylococcus aureus or Escherichia coli. L. rhamnosus suspension was prepared and a part of it was autoclaved to obtain heat-killed lactobacilli. Read More

    Functional analysis of a regulator of G-protein signaling CgRGS1 in the rubber tree anthracnose fungus Colletotrichum gloeosporioides.
    Arch Microbiol 2017 Nov 25. Epub 2017 Nov 25.
    Institute of Tropical Agriculture and Forestry, Hainan University, Haikou, 570228, China.
    Colletotrichum gloeosporioides is the causal agent of rubber anthracnose, which is also one of the important biological factors threatening the development of natural rubber industry in the world. Regulators of G-protein signaling (RGS) are key negative regulators of G-proteins, which play important roles in growth, development and pathogenic processes of plant pathogens. In this study, a RGS gene CgRGS1 was functionally characterized in C. Read More

    First report of a symbiotic relationship between Xenorhabdus griffiniae and an unknown Steinernema from South Africa.
    Arch Microbiol 2018 Mar 23;200(2):349-353. Epub 2017 Nov 23.
    Department of Microbiology, University of Stellenbosch, Private Bag X1, Matieland, 7602, South Africa.
    Strain WS9, a mutualistic-associated bacterium, was isolated from an unknown entomopathogenic Steinernema nematode, collected from a litchi orchard in Friedenheim, Mpumalanga, South Africa. Based on phenotypic and phylogenetic data of the 16S rRNA, gltX, recA, dnaN, gyrB and infB gene sequences, strain WS9 is identified as X. griffiniae. Read More

    Caenispirillum humi sp. nov., a bacterium isolated from the soil of Korean pine garden.
    Arch Microbiol 2018 Mar 23;200(2):343-348. Epub 2017 Nov 23.
    Department of Food and Nutrition, College of Biotechnology and Natural Resource, Chung-Ang University, Anseong-si, Gyeonggi-do, 17546, Republic of Korea.
    A novel bacterial strain MAH-8was isolated from a soil sample of a Korean pine garden and was characterized using a polyphasic approach. Cells were Gram-staining negative, pinkish yellow colored, motile and vibrio-shaped. The strain was aerobic and catalase, oxidase positive, optimum growth temperature and pH were 28-30 °C and 7. Read More

    Phylogenetic diversity and distribution of bacterial and archaeal amoA genes in the East China Sea during spring.
    Arch Microbiol 2018 Mar 16;200(2):329-342. Epub 2017 Nov 16.
    Department of Biology, Hong Kong University of Science and Technology, Clear Water Bay, Kowloon, Hong Kong SAR, Hong Kong.
    Microbial nitrification is a key process in the nitrogen cycle in the continental shelf ecosystems. The genotype compositions and abundance of the ammonia monooxygenase gene, amoA, derived from ammonia-oxidizing archaea (AOA) and bacteria (AOB) in two size fractions (2-10 and 0.2-2 µm), were investigated in the East China Sea (ECS) in May 2008 using PCR-denaturing gradient gel electrophoresis (DGGE) and quantitative PCR (qPCR). Read More

    Microbiological and chemical profiles of elephant grass inoculated with and without Lactobacillus plantarum and Pediococcus acidilactici.
    Arch Microbiol 2018 Mar 11;200(2):311-328. Epub 2017 Nov 11.
    Institute of Ensiling and Processing of Grass, Nanjing Agricultural University, Weigang 1, Nanjing, 210095, People's Republic of China.
    The study was conducted to evaluate the microbiological and chemical profiles of elephant grass inoculated with and without different wild strains of lactic acid bacteria. Silage was prepared of four treatments and one control with three replicates as control (EKC, adding 2 ml/kg sterilizing water), Lactobacillus plantarum (USA commercial bacteria) (EKP), Lactobacillus plantarum (EKA), Pediococcus acidilactici (EKB), and Pediococcus acidilactici (SKD) isolated from King grass. Silage were prepared using polyethylene terephthalate bottles, and incubated at room temperature for different ensiling days. Read More

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