MycoBank gearing up for new horizons.

IMA Fungus 2013 Dec 17;4(2):371-9. Epub 2013 Dec 17.

CBS-KNAW Fungal Biodiversity Center, Uppsalalaan 8, 3584CT Utrecht, The Netherlands;

MycoBank, a registration system for fungi established in 2004 to capture all taxonomic novelties, acts as a coordination hub between repositories such as Index Fungorum and Fungal Names. Since January 2013, registration of fungal names is a mandatory requirement for valid publication under the International Code of Nomenclature for algae, fungi and plants (ICN). This review explains the database innovations that have been implemented over the past few years, and discusses new features such as advanced queries, registration of typification events (MBT numbers for lecto, epi- and neotypes), the multi-lingual database interface, the nomenclature discussion forum, annotation system, and web services with links to third parties. MycoBank has also introduced novel identification services, linking DNA sequence data to numerous related databases to enable intelligent search queries. Although MycoBank fills an important void for taxon registration, challenges for the future remain to improve links between taxonomic names and DNA data, and to also introduce a formal system for naming fungi known from DNA sequence data only. To further improve the quality of MycoBank data, remote access will now allow registered mycologists to act as MycoBank curators, using Citrix software.

Download full-text PDF

Source
http://dx.doi.org/10.5598/imafungus.2013.04.02.16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3905949PMC
December 2013
31 Reads

Publication Analysis

Top Keywords

dna sequence
8
sequence data
8
fungal names
8
mycobank
6
lecto epi-
4
names dna
4
numbers lecto
4
mbt numbers
4
dna data
4
taxonomic names
4
links taxonomic
4
interface nomenclature
4
improve links
4
database interface
4
multi-lingual database
4
events mbt
4
neotypes multi-lingual
4
epi- neotypes
4
typification events
4
naming fungi
4

Similar Publications