Assembly information services in the European Nucleotide Archive.

Nucleic Acids Res 2014 Jan 8;42(Database issue):D38-43. Epub 2013 Nov 8.

European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is a repository for the world public domain nucleotide sequence data output. ENA content covers a spectrum of data types including raw reads, assembly data and functional annotation. ENA has faced a dramatic growth in genome assembly submission rates, data volumes and complexity of datasets. This has prompted a broad reworking of assembly submission services, for which we now reach the end of a major programme of work and many enhancements have already been made available over the year to components of the submission service. In this article, we briefly review ENA content and growth over 2013, describe our rapidly developing services for genome assembly information and outline further major developments over the last year.

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkt1082DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965037PMC
January 2014
24 Reads
19 Citations
9.112 Impact Factor

Publication Analysis

Top Keywords

nucleotide archive
8
assembly submission
8
ena content
8
genome assembly
8
european nucleotide
8
assembly
5
work enhancements
4
ena faced
4
annotation ena
4
functional annotation
4
enhancements year
4
year components
4
components submission
4
including raw
4
submission service
4
raw reads
4
reads assembly
4
programme work
4
assembly data
4
data functional
4

References

(Supplied by CrossRef)
Kinship in the SRP RNA family
Rosenblad et al.
RNA Biol. 2009

Similar Publications