Methods Mol Biol 2007 ;373:177-86
Division of Oncology, Washington University School of Medicine, St. Louis, MO, USA.
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Trends Biotechnol 2002 Sep;20(9):366-8
Department of Ophthalmology & Visual Sciences, The Chinese University of Hong Kong, Hong Kong Eye Hospital, 147K Argyle Street, Kowloon, Hong Kong.
Bioinformatics 2002 Dec;18(12):1696-8
Computer Science Department, University of California, Santa Barbara, CA 99106, USA.
While achieving the best compression ratios for DNA sequences, our new DNACompress program significantly improves the running time of all previous DNA compression programs. Read More
Antonie Van Leeuwenhoek 2004 Nov;86(4):313-5
Danish University of Pharmaceutical Sciences, Institute of Pharmacology, 2 Universitetsparken, DK-2100, Copenhagen Ø, Denmark.
A Windows application for compositional analysis of sequenced genomes (EMBL or GenBank flat files) is available as freeware. The application allows the user to quantify word bias using Markov chain analysis and it allows the user to generate sliding window data for GC-skew, AT-skew, purine excess, keto excess and discrete word counts. The mathematical routines reside in a dynamic link library (DLL), which can be used independently by other applications. Read More
Bioinformatics 2002 Dec;18(12):1692-3
Department of Biochemistry and Molecular Biology, University of Calgary, 3330 Hospital Drive NW, Calgary, Alberta, Canada T2N 4N1.
The Rancourt EST Database (RED) is a web-based system for the analysis, management, and dissemination of expressed sequence tags (ESTs). RED represents a flexible template DNA sequence database that can be easily manipulated to suit the needs of other laboratories undertaking mid-size sequencing projects. Read More