Publications by authors named "Zhiyu Peng"

75Publications

Review of Plastic Surgery Biomaterials and Current Progress in Their 3D Manufacturing Technology.

Authors:
Wei Peng Zhiyu Peng Pei Tang Huan Sun Haoyuan Lei Zhengyong Li Didi Hui Colin Du Changchun Zhou Yongwei Wang

Materials (Basel) 2020 Sep 16;13(18). Epub 2020 Sep 16.

Department of Palliative Care, West China School of Public Health and West China Fourth, Sichuan University, Chengdu 610041, China.

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http://dx.doi.org/10.3390/ma13184108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7560273PMC
September 2020

NGS-based spinal muscular atrophy carrier screening of 10,585 diverse couples in China: a pan-ethnic study.

Authors:
Sumin Zhao Wanyang Wang Yaoshen Wang Rui Han Chunna Fan Peixiang Ni Fengyu Guo Fanwei Zeng Qiaona Yang Yun Yang Yan Sun Xinhua Zhang Yan Chen Baosheng Zhu Wangwei Cai Shaoke Chen Ren Cai Xiaoling Guo Chonglin Zhang Yuqiu Zhou Shuodan Huang Yanhui Liu Biyan Chen Shanhuo Yan Yajun Chen Hongmei Ding Xuan Shang Xiangmin Xu Jun Sun Zhiyu Peng

Eur J Hum Genet 2020 Sep 3. Epub 2020 Sep 3.

BGI Genomics, BGI-Shenzhen, 518083, Shenzhen, China.

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http://dx.doi.org/10.1038/s41431-020-00714-8DOI Listing
September 2020

Author Correction: Reinterpretation of common pathogenic variants in ClinVar revealed a high proportion of downgrades.

Authors:
Jiale Xiang Jiyun Yang Lisha Chen Qiang Chen Haiyan Yang Chengcheng Sun Qing Zhou Zhiyu Peng

Sci Rep 2020 Jul 9;10(1):11593. Epub 2020 Jul 9.

BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.

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http://dx.doi.org/10.1038/s41598-020-67915-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7343794PMC
July 2020

AutoPVS1: An automatic classification tool for PVS1 interpretation of null variants.

Authors:
Jiale Xiang Jiguang Peng Samantha Baxter Zhiyu Peng

Hum Mutat 2020 Sep 29;41(9):1488-1498. Epub 2020 Jun 29.

BGI Genomics, BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.1002/humu.24051DOI Listing
September 2020

Impact of ultrasonography on identifying noninvasive prenatal screening false-negative aneuploidy.

Authors:
Wei Li Fanwei Zeng Baitong Fan Nan Yu Jing Wu Yun Yang Hui Huang Sheng-Li Li Zhiyu Peng

Mol Genet Genomic Med 2020 06 21;8(6):e1213. Epub 2020 Mar 21.

BGI Genomics, BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.1002/mgg3.1213DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7284037PMC
June 2020

[A consensus on the standardization of the next generation sequencing process for the diagnosis of genetic diseases (4) - Report interpretation and genetic counseling].

Authors:
Hui Huang Yiping Shen Weihong Gu Yi Huang Xiaodong Wang Yong Gao Hui Xiong Zaiwei Zhou Jing Wu Duan Ma Dongyan An Wei Zhang Qinmei Fu Xi Xiong Zhiyu Peng Liang Wang Shangzhi Huang Ming Qi

Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2020 Mar;37(3):352-357

The First Affiliated Hospital, SRRS Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China; Zhejiang DIAN Diagnostics Co., Ltd., Hangzhou, Zhejiang 310013, China; University of Rochester Medical Center, New York, NY 14642, USA.

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http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2020.03.022DOI Listing
March 2020

[A consensus on the standardization of the next generation sequencing process for the diagnosis of genetic diseases (3) - Data analysis].

Authors:
Jun Sun Yi Huang Xiaodong Wang Wenfu Li Dongyan An Yong Gao Hui Xiong Zaiwei Zhou Xiong Xu Xuxu Deng Xiaoqing Wang Hui Huang Zhiyu Peng Wei Zhang Shihui Yu Liang Wang Weihong Gu Shangzhi Huang Yiping Shen

Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2020 Mar;37(3):345-351

Boston Children's Hospital, Harvard Medical School, Boston, MA 02115, USA; Maternal and Child Health Hospital of Guangxi Zhuang Autonomous Region, Nanning, Guangxi 530000, China.

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http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2020.03.021DOI Listing
March 2020

[A consensus on the standardization of the next generation sequencing process for the diagnosis of genetic diseases (2) - Sample collection, processing and detection].

Authors:
Xiufeng Zeng Zhenpeng Xu Hui Huang Wubin Qu Jian Wu Juan Wang Yong Gao Dongyan An Xiaoqing Wang Hui Xiong Yiping Shen Ming Qi Xuxu Deng Xiong Xu Lele Sun Zhiyu Peng Weihong Gu Shangzhi Huang Shihui Yu

Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2020 Mar;37(3):339-344

KingMed Medical Diagnosis Center Co., Ltd., Guangzhou, Guangdong 510000, China.

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http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2020.03.020DOI Listing
March 2020

[A consensus on the standardization of the next generation sequencing process for the diagnosis of genetic diseases (1) - Procedures prior to genetic testing].

Authors:
Jian Wang Weihong Gu Hui Huang Yiping Shen Hui Xiong Yi Huang Ming Qi Dongyan An Duan Ma Xuxu Deng Yong Gao Xiaodong Wang Zaiwei Zhou Jian Wu Xiong Xu Wei Zhang Hui Kang Zhiyu Peng Shihui Yu Liang Wang Shangzhi Huang

Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2020 Mar;37(3):334-338

Peking Union Medical College, WHO Collaborating Center for Community Control of Hereditary Diseases, Beijing 100005, China.

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http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2020.03.019DOI Listing
March 2020

Concurrent hearing and genetic screening in a general newborn population.

Authors:
Ling Guo Jiale Xiang Lei Sun Xinyi Yan Jingjing Yang Haiyan Wu Kejian Guo Jiguang Peng Xiaomei Xie Ye Yin Jian Wang Huanming Yang Jun Shen Lijian Zhao Zhiyu Peng

Hum Genet 2020 Apr 30;139(4):521-530. Epub 2020 Jan 30.

BGI Genomics, BGI-Shenzhen, BGI Park, No. 21 Hongan 3rd Street, Yantian District, Shenzhen, 518083, China.

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http://dx.doi.org/10.1007/s00439-020-02118-6DOI Listing
April 2020

Noninvasive prenatal diagnosis of hemophilia A by a haplotype-based approach using cell-free fetal DNA.

Authors:
Chao Chen Jun Sun Yun Yang Lu Jiang Fengyu Guo Yaping Zhu Dan Li Renhua Wu Rong Lu Mei Zhao Fang Chen Peixiang Ni Zhihui He Zhiyu Peng

Biotechniques 2020 03 30;68(3):117-121. Epub 2020 Jan 30.

BGI Genomics, BGI-Shenzhen, Bei Shan Industrial Zone, Yantian District, Shenzhen 518083, Guangdong, China.

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http://dx.doi.org/10.2144/btn-2019-0113DOI Listing
March 2020

Reinterpretation of common pathogenic variants in ClinVar revealed a high proportion of downgrades.

Authors:
Jiale Xiang Jiyun Yang Lisha Chen Qiang Chen Haiyan Yang Chengcheng Sun Qing Zhou Zhiyu Peng

Sci Rep 2020 01 15;10(1):331. Epub 2020 Jan 15.

BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.

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http://dx.doi.org/10.1038/s41598-019-57335-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6962394PMC
January 2020

Noninvasive prenatal diagnosis for Duchenne muscular dystrophy based on the direct haplotype phasing.

Authors:
Min Chen Chao Chen Xiaoyan Huang Jun Sun Lu Jiang Yingting Li Yaping Zhu Changgeng Tian Yufan Li Zhe Lu Yaoshen Wang Fanwei Zeng Yun Yang Xiwei Song Zhiyu Peng Chenghong Yin Dunjin Chen

Prenat Diagn 2020 07 4;40(8):918-924. Epub 2020 Jun 4.

Department of Fetal Medicine and Prenatal Diagnosis, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, China.

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http://dx.doi.org/10.1002/pd.5641DOI Listing
July 2020

Learning curve and clinical outcomes of percutaneous endoscopic transforaminal decompression for lumbar spinal stenosis.

Authors:
Jin Yang Chuan Guo Qingquan Kong Bin Zhang Yu Wang Lifeng Zhang Hao Wu Zhiyu Peng Yuqing Yan Dongfeng Zhang

Int Orthop 2020 02 26;44(2):309-317. Epub 2019 Nov 26.

Department of Orthopedics Surgery, West China Hospital, Sichuan University, 37 Guoxue Lane, Chengdu, 610041, Sichuan, China.

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http://dx.doi.org/10.1007/s00264-019-04448-1DOI Listing
February 2020

Familial pityriasis rubra pilaris in a Chinese family caused by a novel mutation in CARD14 gene.

Authors:
Tieqiang Wu Santasree Banerjee Jianlian Deng Jing Wu Hui Huang Heping Zheng Huiqing Pan Yiming Wang Zhiyu Peng Xiaofang Sun

Indian J Dermatol Venereol Leprol 2020 Jan-Feb;86(1):81-84

Xinhua College, Sun Yat-sen University; Guangzhou Institute of Obstetrics and Gynecology, Key Laboratory for Major Obstetric Diseases of Guangdong Province, Key Laboratory of Reproduction and Genetics of Guangdong Higher Education Institutes, The Third Affiliated Hospital of Guangzhou Medical University, Guangzhou 510150, Guangdong, China.

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http://dx.doi.org/10.4103/ijdvl.IJDVL_9_18DOI Listing
July 2020

Preimplantation genetic testing for a family with usher syndrome through targeted sequencing and haplotype analysis.

Authors:
Haining Luo Chao Chen Yun Yang Yinfeng Zhang Yuan Yuan Wanyang Wang Renhua Wu Zhiyu Peng Ying Han Lu Jiang Ruqiang Yao Xiaoying An Weiwei Zhang Yanqun Le Jiale Xiang Na Yi Hui Huang Wei Li Yunshan Zhang Jun Sun

BMC Med Genomics 2019 11 7;12(1):157. Epub 2019 Nov 7.

Wuhan BGI Clinical Laboratory Co., Ltd, BGI-Wuhan, BGI-Shenzhen, Wuhan, 430074, China.

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http://dx.doi.org/10.1186/s12920-019-0600-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6836415PMC
November 2019

Noninvasive prenatal diagnosis of cobalamin C (cblC) deficiency through target region sequencing of cell-free DNA in maternal plasma.

Authors:
Lianshu Han Chao Chen Fengyu Guo Jun Ye Zhiyu Peng Wenjuan Qiu Yaoshen Wang Wei Li Huiwen Zhang Lili Liang Yu Wang Huanhuan Wang Xing Ji Jun Sun Xuefan Gu

Prenat Diagn 2020 02 26;40(3):324-332. Epub 2019 Dec 26.

Xinhua Hospital, Shanghai Institute for Pediatric Research, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

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http://dx.doi.org/10.1002/pd.5601DOI Listing
February 2020

Novel missense variant in TTN cosegregating with familial atrioventricular block.

Authors:
Guohui Liu Ziying Yang Weiwei Chen Junguang Xu Liangwei Mao Qinlin Yu Jian Guo Hui Xu Fengxia Liu Yan Sun Hui Huang Zhiyu Peng Jun Sun Wei Li Ping Yang

Eur J Med Genet 2020 Mar 27;63(3):103752. Epub 2019 Aug 27.

Department of Cardiology, China-Japan Union Hospital, Jilin University, Changchun, 100029, Jilin Province, China; Jilin Provincial Key Laboratory for Genetic Diagnosis of Cardiovascular Disease, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ejmg.2019.103752DOI Listing
March 2020

Haplotype-Based noninvasive prenatal diagnosis for duchenne muscular dystrophy: A pilot study in South China.

Authors:
Min Chen Chao Chen Yingting Li Yuan Yuan Zhengfei Lai Fengyu Guo Yaoshen Wang Xiaoyan Huang Shiquan Li Renhua Wu Zhiyu Peng Jun Sun Dunjin Chen

Eur J Obstet Gynecol Reprod Biol 2019 Sep 8;240:15-22. Epub 2019 May 8.

Department of Fetal Medicine and Prenatal Diagnosis, the Third Affiliated Hospital of Guangzhou Medical University, Guangzhou, 510150, China; Obstetrics & Gynecology Institute of Guangzhou, Guangzhou, 510150, China; The Medical Centre for Critical Pregnant Women in Guangzhou, Guangzhou, 510150, China; Key Laboratory for Major Obstetric Diseases of Guangdong Province, Guangzhou, 510150, China; Key Laboratory for Reproduction and Genetics of Guangdong Higher Education Institutes, China. Electronic address:

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http://dx.doi.org/10.1016/j.ejogrb.2019.05.005DOI Listing
September 2019

A comprehensive assessment of Next-Generation Sequencing variants validation using a secondary technology.

Authors:
Jianchao Zheng Hongyun Zhang Santasree Banerjee Yun Li Junyu Zhou Qian Yang Xuemei Tan Peng Han Qinmei Fu Xiaoli Cui Yuying Yuan Meiyan Zhang Ruiqin Shen Haifeng Song Xiuqing Zhang Lijian Zhao Zhiyu Peng Wei Wang Ye Yin

Mol Genet Genomic Med 2019 07 4;7(7):e00748. Epub 2019 Jun 4.

BGI Genomics, BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.1002/mgg3.748DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6625156PMC
July 2019

Increased diagnostic yield by reanalysis of data from a hearing loss gene panel.

Authors:
Yu Sun Jiale Xiang Yidong Liu Sen Chen Jintao Yu Jiguang Peng Zijing Liu Lisha Chen Jun Sun Yun Yang Yaping Yang Yulin Zhou Zhiyu Peng

BMC Med Genomics 2019 05 28;12(1):76. Epub 2019 May 28.

BGI Genomics, BGI-Shenzhen, Shenzhen, 518083, China.

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http://dx.doi.org/10.1186/s12920-019-0531-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6540452PMC
May 2019

Severe Thalassemia Caused by Hb Zunyi [β147(HC3)Stop→Gln; : c.442T>C)] on the β-Globin Gene.

Authors:
Qiong Su Shiping Chen Liusong Wu Runmei Tian Xiaoqin Yang Xiaoyan Huang Yan Chen Zhiyu Peng Jindong Chen

Hemoglobin 2019 Jan 14;43(1):7-11. Epub 2019 May 14.

c Department of Urology , University of Rochester Medical Center , Rochester , NY USA.

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https://www.tandfonline.com/doi/full/10.1080/03630269.2019.1
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http://dx.doi.org/10.1080/03630269.2019.1582430DOI Listing
January 2019

Transforaminal Percutaneous Endoscopic Decompression for Lower Thoracic Spinal Stenosis.

Authors:
Chuan Guo Daiwen Zhu Qingquan Kong Lifeng Zhang Yu Wang Jin Yang Yuqing Yan Hao Wu Zhiyu Peng

World Neurosurg 2019 Aug 30;128:e504-e512. Epub 2019 Apr 30.

Orthopaedic Department, West China Hospital, Sichuan University/West China Hospital of Medicine, Sichuan University Chengdu, Sichuan, P.R. China.

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http://dx.doi.org/10.1016/j.wneu.2019.04.186DOI Listing
August 2019

[Study on the preparation and physicochemical properties of fish swim bladder membrane].

Authors:
Lifeng Zhang Chuan Guo Qiaoqiao Shen Qingquan Kong Jinrong Wu Jin Yang Yu Wang Hao Wu Zhiyu Peng Yuqing Yan

Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi 2019 Apr;33(4):486-491

Department of Orthopedics, West China Hospital, Sichuan University, Chengdu Sichuan, 610041, P.R.China.

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http://dx.doi.org/10.7507/1002-1892.201809100DOI Listing
April 2019

Full Endoscopic Transforaminal Decompression Surgery for Symptomatic Lumbar Spinal Stenosis in Geriatric Patients.

Authors:
Jin Yang Hao Wu Qingquan Kong Yu Wang Zhiyu Peng Lifeng Zhang Yuqing Yan Chuan Guo Dongfeng Zhang

World Neurosurg 2019 Jul 25;127:e449-e459. Epub 2019 Mar 25.

Department of Orthopedics Surgery, West China Hospital, Sichuan University, Chengdu, Sichuan, China.

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http://dx.doi.org/10.1016/j.wneu.2019.03.171DOI Listing
July 2019

Nationwide population genetic screening improves outcomes of newborn screening for hearing loss in China.

Authors:
Qiuju Wang Jiale Xiang Jun Sun Yun Yang Jing Guan Dayong Wang Cui Song Ling Guo Hongyang Wang Yaqiu Chen Junhong Leng Xiaman Wang Junqing Zhang Bing Han Jing Zou Chengbin Yan Lidong Zhao Hongyu Luo Yuan Han Wen Yuan Hongyun Zhang Wei Wang Jian Wang Huanming Yang Xun Xu Ye Yin Cynthia C Morton Lijian Zhao Shida Zhu Jun Shen Zhiyu Peng

Genet Med 2019 10 20;21(10):2231-2238. Epub 2019 Mar 20.

BGI Genomics, BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.1038/s41436-019-0481-6DOI Listing
October 2019

Novel loss-of-function mutation in gene identified in a Chinese female with a family history of ovarian cancer: A case report.

Authors:
Yanzhi Cui Yanyan Wang Ningzhi Zhang Jun He Hui Huang Fengling Liu Suju Wei Qian Dong Jing Wu Keke Lin Weixi Chen Jiale Xiang Hui Jin Zhiyu Peng Qiang Zhao Wei Li Da Jiang Santasree Banerjee

Oncol Lett 2019 Mar 21;17(3):3350-3354. Epub 2019 Jan 21.

BGI Genomics, BGI-Shenzhen, Shenzhen, Guangdong 518083, P.R. China.

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http://dx.doi.org/10.3892/ol.2019.9950DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6396105PMC
March 2019

Rapid evolution of protein diversity by de novo origination in Oryza.

Authors:
Li Zhang Yan Ren Tao Yang Guangwei Li Jianhai Chen Andrea R Gschwend Yeisoo Yu Guixue Hou Jin Zi Ruo Zhou Bo Wen Jianwei Zhang Kapeel Chougule Muhua Wang Dario Copetti Zhiyu Peng Chengjun Zhang Yong Zhang Yidan Ouyang Rod A Wing Siqi Liu Manyuan Long

Nat Ecol Evol 2019 04 11;3(4):679-690. Epub 2019 Mar 11.

Department of Ecology and Evolution, The University of Chicago, Chicago, IL, USA.

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http://dx.doi.org/10.1038/s41559-019-0822-5DOI Listing
April 2019

Full Endoscopic Key Hole Technique for Cervical Foraminal Stenosis: Is Mere Dorsal Decompression Enough?

Authors:
Chuan Guo Lifeng Zhang Qingquan Kong Yu Wang Jin Yang Yuqing Yan Hao Wu Zhiyu Peng

World Neurosurg 2019 Jun 24;126:e16-e26. Epub 2019 Jan 24.

Orthopaedic Department, West China Hospital of Sichuan University, Chengdu, Sichuan, Peoples Republic of China.

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http://dx.doi.org/10.1016/j.wneu.2019.01.045DOI Listing
June 2019

A Novel Initiation Codon Mutation (c.3G>T) in a Large Chinese Lynch Syndrome Family with Different Onset Age and mRNA Expression Level.

Authors:
Yanni Zhang Huishuang Chen Zhiyu Peng Santasree Banerjee Wei Li Zhaolong Zhao Jianbin Sun Jian Lv Hui Huang Ru Bai Keke Lin Zhongxin Li

Biomed Res Int 2018 14;2018:1460835. Epub 2018 Nov 14.

Second Department of Surgery, Hebei Medical University Fourth Affiliated Hospital and Hebei Provincial Tumor Hospital, 12 Jiankang Road, Shijiazhuang, Hebei 050011, China.

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http://dx.doi.org/10.1155/2018/1460835DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6261076PMC
March 2019

Outcomes of percutaneous endoscopic trans-articular discectomy for huge central or paracentral lumbar disc herniation.

Authors:
Yu Wang Yuqing Yan Jin Yang Lifeng Zhang Chuan Guo Zhiyu Peng Hao Wu Dongfeng Zhang Qingquan Kong

Int Orthop 2019 04 29;43(4):939-945. Epub 2018 Oct 29.

Department of Orthopedics Surgery, West China Hospital, Sichuan University, No. 37, Guoxue Lane, Wainan Street, Wuhou District, Chengdu, 610041, Sichuan, China.

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http://dx.doi.org/10.1007/s00264-018-4210-6DOI Listing
April 2019

Pilot study of expanded carrier screening for 11 recessive diseases in China: results from 10,476 ethnically diverse couples.

Authors:
Sumin Zhao Jiale Xiang Chunna Fan Asan Xuan Shang Xinhua Zhang Yan Chen Baosheng Zhu Wangwei Cai Shaoke Chen Ren Cai Xiaoling Guo Chonglin Zhang Yuqiu Zhou Shuodan Huang Yanhui Liu Biyan Chen Shanhuo Yan Yajun Chen Hongmei Ding Fengyu Guo Yaoshen Wang Wenwei Zhong Yaping Zhu Yaling Wang Chao Chen Yun Li Hui Huang Mao Mao Ye Yin Jian Wang Huanming Yang Xiangmin Xu Jun Sun Zhiyu Peng

Eur J Hum Genet 2019 02 1;27(2):254-262. Epub 2018 Oct 1.

BGI Genomics, BGI-Shenzhen, 518083, Shenzhen, China.

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http://www.nature.com/articles/s41431-018-0253-9
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http://dx.doi.org/10.1038/s41431-018-0253-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6336873PMC
February 2019

Percutaneous Endoscopic Lumbar Discectomy for Highly Upmigrated Disc Herniation Through the Transforaminal Isthmus Plasty Approach.

Authors:
Yuqing Yan Yu Wang Jin Yang Hao Wu Lifeng Zhang Zhiyu Peng Chuan Guo Qingquan Kong

World Neurosurg 2018 Dec 28;120:511-515. Epub 2018 Sep 28.

Department of Orthopedic Surgery, West China Hospital, Sichuan University, Chengdu, China. Electronic address:

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http://dx.doi.org/10.1016/j.wneu.2018.09.157DOI Listing
December 2018

Identification of a novel breast cancer-causing mutation in the gene by targeted next generation sequencing: A case report.

Authors:
Yanyan Wang Da Jiang Qiang Zhao Hui Huang Xue Zhang Yanzhi Cui Jiayin Liu Jing Wu Keke Lin Weixi Chen Jiale Xiang Hui Jin Zhiyu Peng Santasree Banerjee

Oncol Lett 2018 Sep 12;16(3):3913-3916. Epub 2018 Jul 12.

BGI Genomics, BGI-Shenzhen, Shenzhen, Guangdong 518083, P.R. China.

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http://dx.doi.org/10.3892/ol.2018.9139DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6096242PMC
September 2018

Percutaneous Endoscopic Lumbar Decompression for Lumbar Lateral Spinal Canal Stenosis: Classification of Lateral Region of Lumbar Spinal Canal and Surgical Approaches.

Authors:
Yu Wang Qingyu Dou Jin Yang Lifeng Zhang Yuqing Yan Zhiyu Peng Chuan Guo Qingquan Kong

World Neurosurg 2018 Nov 24;119:e276-e283. Epub 2018 Jul 24.

Department of Orthopedic Surgery, West China Hospital of Sichuan University, Chengdu, China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18788750183161
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http://dx.doi.org/10.1016/j.wneu.2018.07.133DOI Listing
November 2018

Next generation sequencing-based molecular profiling of lung adenocarcinoma using pleural effusion specimens.

Authors:
Liping Liu Di Shao Qiuhua Deng Hailing Tang Jingjing Wang Jilong Liu Fengming Guo Yongping Lin Zhiyu Peng Mao Mao Karsten Kristiansen Mingzhi Ye Jianxing He

J Thorac Dis 2018 May;10(5):2631-2637

The Translational Medicine Laboratory, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.

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http://jtd.amegroups.com/article/view/20945/16460
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http://dx.doi.org/10.21037/jtd.2018.04.125DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006135PMC
May 2018

Possible pathogenic mechanism of gluteal pain in lumbar disc hernia.

Authors:
Yu Wang Jin Yang Yuqing Yan Lifeng Zhang Chuan Guo Zhiyu Peng Qingquan Kong

BMC Musculoskelet Disord 2018 Jul 11;19(1):214. Epub 2018 Jul 11.

Department of Orthopedic Surgery, West China Hospital, Sichuan University, No. 37, Guoxue Lane, Wainan Street, Wuhou District, Chengdu, 610041, Sichuan, China.

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http://dx.doi.org/10.1186/s12891-018-2147-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6042418PMC
July 2018

Comprehensive targeted super-deep next generation sequencing enhances differential diagnosis of solitary pulmonary nodules.

Authors:
Mingzhi Ye Shiyong Li Weizhe Huang Chunli Wang Liping Liu Jun Liu Jilong Liu Hui Pan Qiuhua Deng Hailing Tang Long Jiang Weizhe Huang Xi Chen Di Shao Zhiyu Peng Renhua Wu Jing Zhong Zhe Wang Xiaoping Zhang Karsten Kristiansen Jian Wang Ye Yin Mao Mao Jianxing He Wenhua Liang

J Thorac Dis 2018 Apr;10(Suppl 7):S820-S829

The First Affiliated Hospital of Guangzhou Medical University, National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Guangzhou 510120, China.

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http://jtd.amegroups.com/article/view/20509/15790
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http://dx.doi.org/10.21037/jtd.2018.04.09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5945686PMC
April 2018

The mutational landscape of , and driven murine neuroblastoma mimics human disease.

Authors:
Bram De Wilde Anneleen Beckers Sven Lindner Althoff Kristina Katleen De Preter Pauline Depuydt Pieter Mestdagh Tom Sante Steve Lefever Falk Hertwig Zhiyu Peng Le-Ming Shi Sangkyun Lee Elien Vandermarliere Lennart Martens Björn Menten Alexander Schramm Matthias Fischer Johannes Schulte Jo Vandesompele Frank Speleman

Oncotarget 2018 Feb 22;9(9):8334-8349. Epub 2017 Dec 22.

Center for Medical Genetics, Ghent University, Ghent, Belgium.

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http://dx.doi.org/10.18632/oncotarget.23614DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5823580PMC
February 2018

[Discussion on the standard of clinical genetic testing report and the consensus of gene testing industry].

Authors:
Hui Huang Yiping Shen Weihong Gu Wei Wang Yiming Wang Ming Qi Jun Shen Zhengqing Qiu Shihui Yu Zaiwei Zhou Baixue Chen Lei Chen Yundi Chen Huanhuan Cui Juan Du Yong Gao Yiran Guo Chanjuan Hu Liang Hu Yi Huang Peipei Li Xiaorong Li Xiurong Li Yaping Liu Jie Lu Duan Ma Yongyi Ma Mei Peng Fang Song Hongye Sun Liang Wang Dawei Wang Jingmin Wang Ling Wang Zhengyuan Wang Zhinong Wang Jihong Wu Jing Wu Jian Wu Yimin Xu Hong Yao Dongsheng Yang Xu Yang Yanling Yang Ying Zhang Yulin Zhou Baosheng Zhu Sicong Zeng Zhiyu Peng Shangzhi Huang

Zhonghua Yi Xue Yi Chuan Xue Za Zhi 2018 Feb;35(1):1-8

BGI Genomics, BGI-Shenzhen, Guangdong 518083, China; Beijing Union Medical College, WHO Collaborating Center for Community Control of Hereditary Diseases, Beijing 100005, China. Email:

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http://dx.doi.org/10.3760/cma.j.issn.1003-9406.2018.01.001DOI Listing
February 2018

Development and clinical validation of a circulating tumor DNA test for the identification of clinically actionable mutations in nonsmall cell lung cancer.

Authors:
Liping Liu Han Liu Di Shao Zu Liu Jingjing Wang Qiuhua Deng Hailing Tang Haihong Yang Yalei Zhang Yuan Qiu Fei Cui Meihua Tan Pan Zhang Zhilong Li Jilong Liu Wenhua Liang Yuying Wang Zhiyu Peng Jian Wang Huanming Yang Mao Mao Karsten Kristiansen Mingzhi Ye Jianxing He

Genes Chromosomes Cancer 2018 04 30;57(4):211-220. Epub 2018 Jan 30.

State Key Laboratory of Respiratory Diseases, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Disease, Guangzhou, 510120, China.

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http://dx.doi.org/10.1002/gcc.22522DOI Listing
April 2018

β‑thalassemia caused by compound heterozygous mutations and cured by bone marrow transplantation: A case report.

Authors:
Liusong Wu Zhiyu Peng Sen Lu Mei Tan Ying Rong Runmei Tian Yuhang Yang Yan Chen Jindong Chen

Mol Med Rep 2017 Nov 12;16(5):6552-6557. Epub 2017 Sep 12.

Department of Urology, University of Rochester Medical Center, Rochester, NY 14642, USA.

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http://dx.doi.org/10.3892/mmr.2017.7476DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5865824PMC
November 2017

Rapid Targeted Next-Generation Sequencing Platform for Molecular Screening and Clinical Genotyping in Subjects with Hemoglobinopathies.

Authors:
Xuan Shang Zhiyu Peng Yuhua Ye Asan Xinhua Zhang Yan Chen Baosheng Zhu Wangwei Cai Shaoke Chen Ren Cai Xiaoling Guo Chonglin Zhang Yuqiu Zhou Shuodan Huang Yanhui Liu Biyan Chen Shanhuo Yan Yajun Chen Hongmei Ding Xiaolin Yin Liusong Wu Jing He Dongai Huang Sheng He Tizhen Yan Xin Fan Yuehong Zhou Xiaofeng Wei Sumin Zhao Decheng Cai Fengyu Guo Qianqian Zhang Yun Li Xuelian Zhang Haorong Lu Huajie Huang Junfu Guo Fei Zhu Yuan Yuan Li Zhang Na Liu Zhiming Li Hui Jiang Qiang Zhang Yijia Zhang Wan Khairunnisa Wan Juhari Sarifah Hanafi Wanjun Zhou Fu Xiong Huanming Yang Jian Wang Bin Alwi Zilfalil Ming Qi Yaping Yang Ye Yin Mao Mao Xiangmin Xu

EBioMedicine 2017 Sep 17;23:150-159. Epub 2017 Aug 17.

Department of Medical Genetics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, Guangdong, China; Guangdong Technology and Engineering Research Center for Molecular Diagnostics of Human Genetic Diseases, Guangzhou, Guangdong, China; Guangdong Key Laboratory of Biological Chip, Guangzhou, Guangdong, China. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2017.08.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605365PMC
September 2017

Next-generation sequencing improves thalassemia carrier screening among premarital adults in a high prevalence population: the Dai nationality, China.

Authors:
Jing He Wenhui Song Jinlong Yang Sen Lu Yuan Yuan Junfu Guo Jie Zhang Kai Ye Fan Yang Fangfang Long Zhiyu Peng Haijing Yu Le Cheng Baosheng Zhu

Genet Med 2017 09 26;19(9):1022-1031. Epub 2017 Jan 26.

Yunnan Provincial Key Laboratory For Birth Defects and Genetic Diseases, The First People's Hospital of Yunnan Province, Kunming, China.

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http://www.nature.com/doifinder/10.1038/gim.2016.218
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September 2017

Clinical and genomic evaluation of a Chinese patient with a novel deletion associated with Phelan-McDermid syndrome.

Authors:
Dongzhu Lei Shaoyuan Li Santasree Banerjee Haoqing Zhang Caiyun Li Shuai Hou Danjing Chen Haiying Yan Hanmei Li Huan Huan Peng Saijun Liu Xinxin Zhang Zhiyu Peng Jian Wang Huanming Yang Hui Huang Jing Wu

Oncotarget 2016 Dec;7(49):80327-80335

BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.18632/oncotarget.12552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5348323PMC
December 2016

Frequent alterations in cytoskeleton remodelling genes in primary and metastatic lung adenocarcinomas.

Authors:
Kui Wu Xin Zhang Fuqiang Li Dakai Xiao Yong Hou Shida Zhu Dongbing Liu Xiaofei Ye Mingzhi Ye Jie Yang Libin Shao Hui Pan Na Lu Yuan Yu Liping Liu Jin Li Liyan Huang Hailing Tang Qiuhua Deng Yue Zheng Lihua Peng Geng Liu Xia Gu Ping He Yingying Gu Weixuan Lin Huiming He Guoyun Xie Han Liang Na An Hui Wang Manuel Teixeira Joana Vieira Wenhua Liang Xin Zhao Zhiyu Peng Feng Mu Xiuqing Zhang Xun Xu Huanming Yang Karsten Kristiansen Jian Wang Nanshan Zhong Jun Wang Qiang Pan-Hammarström Jianxing He

Nat Commun 2015 Dec 9;6:10131. Epub 2015 Dec 9.

Department of Thoracic Surgery, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou 510120, China.

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http://dx.doi.org/10.1038/ncomms10131DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4682110PMC
December 2015

Telomerase activation by genomic rearrangements in high-risk neuroblastoma.

Authors:
Martin Peifer Falk Hertwig Frederik Roels Daniel Dreidax Moritz Gartlgruber Roopika Menon Andrea Krämer Justin L Roncaioli Frederik Sand Johannes M Heuckmann Fakhera Ikram Rene Schmidt Sandra Ackermann Anne Engesser Yvonne Kahlert Wenzel Vogel Janine Altmüller Peter Nürnberg Jean Thierry-Mieg Danielle Thierry-Mieg Aruljothi Mariappan Stefanie Heynck Erika Mariotti Kai-Oliver Henrich Christian Gloeckner Graziella Bosco Ivo Leuschner Michal R Schweiger Larissa Savelyeva Simon C Watkins Chunxuan Shao Emma Bell Thomas Höfer Viktor Achter Ulrich Lang Jessica Theissen Ruth Volland Maral Saadati Angelika Eggert Bram de Wilde Frank Berthold Zhiyu Peng Chen Zhao Leming Shi Monika Ortmann Reinhard Büttner Sven Perner Barbara Hero Alexander Schramm Johannes H Schulte Carl Herrmann Roderick J O'Sullivan Frank Westermann Roman K Thomas Matthias Fischer

Nature 2015 Oct 14;526(7575):700-4. Epub 2015 Oct 14.

Center for Molecular Medicine Cologne (CMMC), University of Cologne, 50931 Cologne, Germany.

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http://dx.doi.org/10.1038/nature14980DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4881306PMC
October 2015

Comparison of RNA-seq and microarray-based models for clinical endpoint prediction.

Authors:
Wenqian Zhang Ying Yu Falk Hertwig Jean Thierry-Mieg Wenwei Zhang Danielle Thierry-Mieg Jian Wang Cesare Furlanello Viswanath Devanarayan Jie Cheng Youping Deng Barbara Hero Huixiao Hong Meiwen Jia Li Li Simon M Lin Yuri Nikolsky André Oberthuer Tao Qing Zhenqiang Su Ruth Volland Charles Wang May D Wang Junmei Ai Davide Albanese Shahab Asgharzadeh Smadar Avigad Wenjun Bao Marina Bessarabova Murray H Brilliant Benedikt Brors Marco Chierici Tzu-Ming Chu Jibin Zhang Richard G Grundy Min Max He Scott Hebbring Howard L Kaufman Samir Lababidi Lee J Lancashire Yan Li Xin X Lu Heng Luo Xiwen Ma Baitang Ning Rosa Noguera Martin Peifer John H Phan Frederik Roels Carolina Rosswog Susan Shao Jie Shen Jessica Theissen Gian Paolo Tonini Jo Vandesompele Po-Yen Wu Wenzhong Xiao Joshua Xu Weihong Xu Jiekun Xuan Yong Yang Zhan Ye Zirui Dong Ke K Zhang Ye Yin Chen Zhao Yuanting Zheng Russell D Wolfinger Tieliu Shi Linda H Malkas Frank Berthold Jun Wang Weida Tong Leming Shi Zhiyu Peng Matthias Fischer

Genome Biol 2015 Jun 25;16:133. Epub 2015 Jun 25.

Department of Pediatric Oncology and Hematology, University Children's Hospital of Cologne, Kerpener Strasse 62, D-50924, Cologne, Germany.

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http://dx.doi.org/10.1186/s13059-015-0694-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4506430PMC
June 2015

Hypothesis: Artifacts, Including Spurious Chimeric RNAs with a Short Homologous Sequence, Caused by Consecutive Reverse Transcriptions and Endogenous Random Primers.

Authors:
Zhiyu Peng Chengfu Yuan Lucas Zellmer Siqi Liu Ningzhi Xu D Joshua Liao

J Cancer 2015 1;6(6):555-67. Epub 2015 May 1.

2. Hormel Institute, University of Minnesota, Austin, MN 55912, USA.

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http://dx.doi.org/10.7150/jca.11997DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4439942PMC
May 2015

A systems genetics study of swine illustrates mechanisms underlying human phenotypic traits.

Authors:
Jun Zhu Congying Chen Bin Yang Yuanmei Guo Huashui Ai Jun Ren Zhiyu Peng Zhidong Tu Xia Yang Qingying Meng Stephen Friend Lusheng Huang

BMC Genomics 2015 Feb 14;16:88. Epub 2015 Feb 14.

Jiangxi Agricultural University, Nanchang, Jiangxi, China.

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http://dx.doi.org/10.1186/s12864-015-1240-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4336704PMC
February 2015

The risk-associated long noncoding RNA NBAT-1 controls neuroblastoma progression by regulating cell proliferation and neuronal differentiation.

Authors:
Gaurav Kumar Pandey Sanhita Mitra Santhilal Subhash Falk Hertwig Meena Kanduri Kankadeb Mishra Susanne Fransson Abiarchana Ganeshram Tanmoy Mondal Sashidhar Bandaru Malin Ostensson Levent M Akyürek Jonas Abrahamsson Susan Pfeifer Erik Larsson Leming Shi Zhiyu Peng Matthias Fischer Tommy Martinsson Fredrik Hedborg Per Kogner Chandrasekhar Kanduri

Cancer Cell 2014 Nov 10;26(5):722-37. Epub 2014 Nov 10.

Department of Medical Genetics, Institute of Biomedicine, Sahlgrenska Academy, University of Gothenburg, 405 30 Gothenburg, Sweden. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2014.09.014DOI Listing
November 2014

Genome-wide identification of RNA editing in hepatocellular carcinoma.

Authors:
Lin Kang Xiaoqiao Liu Zhoulin Gong Hancheng Zheng Jun Wang Yingrui Li Huanming Yang James Hardwick Hongyue Dai Ronnie T P Poon Nikki P Lee Mao Mao Zhiyu Peng Ronghua Chen

Genomics 2015 Feb 25;105(2):76-82. Epub 2014 Nov 25.

Scientific Informatics, MSD R&D (China), Beijing, China; Scientific Informatics, Merck & Co., Inc., Boston, MA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ygeno.2014.11.005DOI Listing
February 2015

Transcriptome profiling shows gene regulation patterns in a flavonoid pathway in response to exogenous phenylalanine in Boesenbergia rotunda cell culture.

Authors:
Noor Diyana Md-Mustafa Norzulaani Khalid Huan Gao Zhiyu Peng Mohd Firdaus Alimin Noraini Bujang Wong Sher Ming Yusmin Mohd-Yusuf Jennifer A Harikrishna Rofina Yasmin Othman

BMC Genomics 2014 Nov 18;15:984. Epub 2014 Nov 18.

Centre for Research in Biotechnology for Agriculture (CEBAR), University of Malaya, 50603 Kuala Lumpur, Malaysia.

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http://dx.doi.org/10.1186/1471-2164-15-984DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4289260PMC
November 2014

Caste-specific RNA editomes in the leaf-cutting ant Acromyrmex echinatior.

Authors:
Qiye Li Zongji Wang Jinmin Lian Morten Schiøtt Lijun Jin Pei Zhang Yanyan Zhang Sanne Nygaard Zhiyu Peng Yang Zhou Yuan Deng Wenwei Zhang Jacobus J Boomsma Guojie Zhang

Nat Commun 2014 Sep 30;5:4943. Epub 2014 Sep 30.

1] China National GeneBank, BGI-Shenzhen, Building No. 11, Beishan Industrial Zone, Yantian District, Shenzhen 518083, China [2] Centre for Social Evolution, Department of Biology, University of Copenhagen, Universitetsparken 15, DK-2100 Copenhagen, Denmark.

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http://dx.doi.org/10.1038/ncomms5943DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4200514PMC
September 2014

Transcriptome sequencing and genome-wide association analyses reveal lysosomal function and actin cytoskeleton remodeling in schizophrenia and bipolar disorder.

Authors:
Zhongming Zhao Jiabao Xu Jingchun Chen Sanghyeon Kim Mark Reimers Silviu-Alin Bacanu Hui Yu Chunyu Liu Jingchun Sun Quan Wang Peilin Jia Fengping Xu Yong Zhang Kenneth S Kendler Zhiyu Peng Xiangning Chen

Mol Psychiatry 2015 May 12;20(5):563-572. Epub 2014 Aug 12.

Virginia Institute for Psychiatric and Behavioral Genetics, Virginia Commonwealth University, Richmond, VA 23298, USA.

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http://www.nature.com/articles/mp201482
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4326626PMC
May 2015

Deep sequencing of HIV-infected cells: insights into nascent transcription and host-directed therapy.

Authors:
Xinxia Peng Pavel Sova Richard R Green Matthew J Thomas Marcus J Korth Sean Proll Jiabao Xu Yanbing Cheng Kang Yi Li Chen Zhiyu Peng Jun Wang Robert E Palermo Michael G Katze

J Virol 2014 Aug 21;88(16):8768-82. Epub 2014 May 21.

Department of Microbiology, University of Washington, Seattle, Washington, USA Washington National Primate Research Center, Seattle, Washington, USA

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4136300PMC
August 2014

RNA editome in rhesus macaque shaped by purifying selection.

Authors:
Jia-Yu Chen Zhiyu Peng Rongli Zhang Xin-Zhuang Yang Bertrand Chin-Ming Tan Huaying Fang Chu-Jun Liu Mingming Shi Zhi-Qiang Ye Yong E Zhang Minghua Deng Xiuqin Zhang Chuan-Yun Li

PLoS Genet 2014 Apr 10;10(4):e1004274. Epub 2014 Apr 10.

Beijing Key Laboratory of Cardiometabolic Molecular Medicine, Institute of Molecular Medicine, Peking University, Beijing, China.

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http://dx.doi.org/10.1371/journal.pgen.1004274DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3983040PMC
April 2014

RNA sequencing reveals the complex regulatory network in the maize kernel.

Authors:
Junjie Fu Yanbing Cheng Jingjing Linghu Xiaohong Yang Lin Kang Zuxin Zhang Jie Zhang Cheng He Xuemei Du Zhiyu Peng Bo Wang Lihong Zhai Changmin Dai Jiabao Xu Weidong Wang Xiangru Li Jun Zheng Li Chen Longhai Luo Junjie Liu Xiaoju Qian Jianbing Yan Jun Wang Guoying Wang

Nat Commun 2013 ;4:2832

Institute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.

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http://dx.doi.org/10.1038/ncomms3832DOI Listing
July 2014

SOAPfusion: a robust and effective computational fusion discovery tool for RNA-seq reads.

Authors:
Jikun Wu Wenqian Zhang Songbo Huang Zengquan He Yanbing Cheng Jun Wang Tak-Wah Lam Zhiyu Peng Siu-Ming Yiu

Bioinformatics 2013 Dec 11;29(23):2971-8. Epub 2013 Oct 11.

Department of Computer Science, The University of Hong Kong, Hong Kong, China, BGI-Shenzhen, Shenzhen, China, Department of Biology, University of Copenhagen, Copenhagen, Denmark, King Abdulaziz University, Jeddah, Saudi Arabia, The Novo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen and Guangzhou Key Laboratory of Cancer Trans-Omics Research, BGI-Guangzhou, Guangzhou, China.

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http://dx.doi.org/10.1093/bioinformatics/btt522DOI Listing
December 2013

Whole-genome sequencing identifies recurrent mutations in hepatocellular carcinoma.

Authors:
Zhengyan Kan Hancheng Zheng Xiao Liu Shuyu Li Thomas D Barber Zhuolin Gong Huan Gao Ke Hao Melinda D Willard Jiangchun Xu Robert Hauptschein Paul A Rejto Julio Fernandez Guan Wang Qinghui Zhang Bo Wang Ronghua Chen Jian Wang Nikki P Lee Wei Zhou Zhao Lin Zhiyu Peng Kang Yi Shengpei Chen Lin Li Xiaomei Fan Jie Yang Rui Ye Jia Ju Kai Wang Heather Estrella Shibing Deng Ping Wei Ming Qiu Isabella H Wulur Jiangang Liu Mariam E Ehsani Chunsheng Zhang Andrey Loboda Wing Kin Sung Amit Aggarwal Ronnie T Poon Sheung Tat Fan Jun Wang James Hardwick Christoph Reinhard Hongyue Dai Yingrui Li John M Luk Mao Mao

Genome Res 2013 Sep 20;23(9):1422-33. Epub 2013 Jun 20.

Pfizer Oncology, San Diego, California 92121, USA.

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http://dx.doi.org/10.1101/gr.154492.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3759719PMC
September 2013

Lack of evidence for existence of noncanonical RNA editing.

Authors:
Robert Piskol Zhiyu Peng Jun Wang Jin Billy Li

Nat Biotechnol 2013 Jan;31(1):19-20

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http://dx.doi.org/10.1038/nbt.2472DOI Listing
January 2013

Genome-wide association study dissects the genetic architecture of oil biosynthesis in maize kernels.

Authors:
Hui Li Zhiyu Peng Xiaohong Yang Weidong Wang Junjie Fu Jianhua Wang Yingjia Han Yuchao Chai Tingting Guo Ning Yang Jie Liu Marilyn L Warburton Yanbing Cheng Xiaomin Hao Pan Zhang Jinyang Zhao Yunjun Liu Guoying Wang Jiansheng Li Jianbing Yan

Nat Genet 2013 Jan 16;45(1):43-50. Epub 2012 Dec 16.

National Maize Improvement Center of China, Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China.

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http://dx.doi.org/10.1038/ng.2484DOI Listing
January 2013

Sequencing, annotation, and characterization of the influenza ferret infectome.

Authors:
Alberto J León David Banner Luoling Xu Longsi Ran Zhiyu Peng Kang Yi Chao Chen Fengping Xu Jinrong Huang Zhen Zhao Zhen Lin Stephen H S Huang Yuan Fang Alyson A Kelvin Ted M Ross Amber Farooqui David J Kelvin

J Virol 2013 Feb 12;87(4):1957-66. Epub 2012 Dec 12.

Division of Immunology, International Institute of Infection and Immunity, Shantou University Medical College, Shantou, Guangdong, China.

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http://dx.doi.org/10.1128/JVI.02476-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3571481PMC
February 2013

The difficult calls in RNA editing. Interviewed by H Craig Mak.

Authors:
Brenda Bass Heather Hundley Jin Billy Li Zhiyu Peng Joe Pickrell Xinshu Grace Xiao Li Yang

Nat Biotechnol 2012 Dec;30(12):1207-9

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http://dx.doi.org/10.1038/nbt.2452DOI Listing
December 2012

The oyster genome reveals stress adaptation and complexity of shell formation.

Authors:
Guofan Zhang Xiaodong Fang Ximing Guo Li Li Ruibang Luo Fei Xu Pengcheng Yang Linlin Zhang Xiaotong Wang Haigang Qi Zhiqiang Xiong Huayong Que Yinlong Xie Peter W H Holland Jordi Paps Yabing Zhu Fucun Wu Yuanxin Chen Jiafeng Wang Chunfang Peng Jie Meng Lan Yang Jun Liu Bo Wen Na Zhang Zhiyong Huang Qihui Zhu Yue Feng Andrew Mount Dennis Hedgecock Zhe Xu Yunjie Liu Tomislav Domazet-Lošo Yishuai Du Xiaoqing Sun Shoudu Zhang Binghang Liu Peizhou Cheng Xuanting Jiang Juan Li Dingding Fan Wei Wang Wenjing Fu Tong Wang Bo Wang Jibiao Zhang Zhiyu Peng Yingxiang Li Na Li Jinpeng Wang Maoshan Chen Yan He Fengji Tan Xiaorui Song Qiumei Zheng Ronglian Huang Hailong Yang Xuedi Du Li Chen Mei Yang Patrick M Gaffney Shan Wang Longhai Luo Zhicai She Yao Ming Wen Huang Shu Zhang Baoyu Huang Yong Zhang Tao Qu Peixiang Ni Guoying Miao Junyi Wang Qiang Wang Christian E W Steinberg Haiyan Wang Ning Li Lumin Qian Guojie Zhang Yingrui Li Huanming Yang Xiao Liu Jian Wang Ye Yin Jun Wang

Nature 2012 Oct 19;490(7418):49-54. Epub 2012 Sep 19.

Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China.

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October 2012

Genome-wide analysis of DNA methylation and gene expression changes in two Arabidopsis ecotypes and their reciprocal hybrids.

Authors:
Huaishun Shen Hang He Jigang Li Wei Chen Xuncheng Wang Lan Guo Zhiyu Peng Guangming He Shangwei Zhong Yijun Qi William Terzaghi Xing Wang Deng

Plant Cell 2012 Mar 20;24(3):875-92. Epub 2012 Mar 20.

Peking-Yale Joint Center for Plant Molecular Genetics and Agro-Biotechnology, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing 100871, China.

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http://dx.doi.org/10.1105/tpc.111.094870DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3336129PMC
March 2012

RNA-seq analysis of prostate cancer in the Chinese population identifies recurrent gene fusions, cancer-associated long noncoding RNAs and aberrant alternative splicings.

Authors:
Shancheng Ren Zhiyu Peng Jian-Hua Mao Yongwei Yu Changjun Yin Xin Gao Zilian Cui Jibin Zhang Kang Yi Weidong Xu Chao Chen Fubo Wang Xinwu Guo Ji Lu Jun Yang Min Wei Zhijian Tian Yinghui Guan Liang Tang Chuanliang Xu Linhui Wang Xu Gao Wei Tian Jian Wang Huanming Yang Jun Wang Yinghao Sun

Cell Res 2012 May 21;22(5):806-21. Epub 2012 Feb 21.

Department of Urology, Shanghai Changhai Hospital, Second Military Medical University, Shanghai 200433, China.

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http://dx.doi.org/10.1038/cr.2012.30DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3343650PMC
May 2012

Comprehensive analysis of RNA-Seq data reveals extensive RNA editing in a human transcriptome.

Authors:
Zhiyu Peng Yanbing Cheng Bertrand Chin-Ming Tan Lin Kang Zhijian Tian Yuankun Zhu Wenwei Zhang Yu Liang Xueda Hu Xuemei Tan Jing Guo Zirui Dong Yan Liang Li Bao Jun Wang

Nat Biotechnol 2012 Feb 12;30(3):253-60. Epub 2012 Feb 12.

BGI-Shenzhen, Shenzhen, China.

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http://dx.doi.org/10.1038/nbt.2122DOI Listing
February 2012

SOAPsplice: Genome-Wide ab initio Detection of Splice Junctions from RNA-Seq Data.

Authors:
Songbo Huang Jinbo Zhang Ruiqiang Li Wenqian Zhang Zengquan He Tak-Wah Lam Zhiyu Peng Siu-Ming Yiu

Front Genet 2011 7;2:46. Epub 2011 Jul 7.

Bioinformatics Center, Beijing Genomics Institute at Shenzhen Shenzhen, China.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3268599PMC
October 2012

Comparative mRNA and microRNA expression profiling of three genitourinary cancers reveals common hallmarks and cancer-specific molecular events.

Authors:
Xianxin Li Jiahao Chen Xueda Hu Yi Huang Zhizhong Li Liang Zhou Zhijian Tian Hongyu Ma Zhiyun Wu Maoshan Chen Zujing Han Zhiyu Peng Xiaokun Zhao Chaozhao Liang Yong Wang Liang Sun Jing Chen Jun Zhao Binghua Jiang Huanming Yang Yaoting Gui Zhiming Cai Xiuqing Zhang

PLoS One 2011 25;6(7):e22570. Epub 2011 Jul 25.

Department of Urology, Peking University Shenzhen Hospital, Shenzhen, China.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3143156PMC
December 2011

Integrated profiling of microRNAs and mRNAs: microRNAs located on Xq27.3 associate with clear cell renal cell carcinoma.

Authors:
Liang Zhou Jiahao Chen Zhizhong Li Xianxin Li Xueda Hu Yi Huang Xiaokun Zhao Chaozhao Liang Yong Wang Liang Sun Min Shi Xiaohong Xu Feng Shen Maoshan Chen Zujing Han Zhiyu Peng Qingna Zhai Jing Chen Zhongfu Zhang Ruilin Yang Jiongxian Ye Zhichen Guan Huanming Yang Yaoting Gui Jun Wang Zhiming Cai Xiuqing Zhang

PLoS One 2010 Dec 30;5(12):e15224. Epub 2010 Dec 30.

The Key Laboratory of Stem Cell Biology, Guangdong and Shenzhen Key Laboratory of Male Reproductive Medicine and Genetics, Institute of Urology, Peking University Shenzhen Hospital, Shenzhen PKU-HKUST Medical Center, Shenzhen, China.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013074PMC
December 2010

AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies.

Authors:
Zhiqiang Jiang Xiaochuan Liu Zhiyu Peng Yinan Wan Yusi Ji Wenrong He Wen Wan Jingchu Luo Hongwei Guo

Nucleic Acids Res 2011 Jan 2;39(Database issue):D1123-9. Epub 2010 Nov 2.

National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University, Beijing 100871, PR China.

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http://dx.doi.org/10.1093/nar/gkq1066DOI Listing
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January 2011

A platform of high-density INDEL/CAPS markers for map-based cloning in Arabidopsis.

Authors:
Xianhui Hou Linchuan Li Zhiyu Peng Baoye Wei Saijun Tang Maoyu Ding Jingjing Liu Fangxian Zhang Yunde Zhao Hongya Gu Li-Jia Qu

Plant J 2010 Sep;63(5):880-8

National Laboratory for Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University, Beijing, China.

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http://dx.doi.org/10.1111/j.1365-313X.2010.04277.xDOI Listing
September 2010

Genome-wide and organ-specific landscapes of epigenetic modifications and their relationships to mRNA and small RNA transcriptomes in maize.

Authors:
Xiangfeng Wang Axel A Elling Xueyong Li Ning Li Zhiyu Peng Guangming He Hui Sun Yijun Qi X Shirley Liu Xing Wang Deng

Plant Cell 2009 Apr 17;21(4):1053-69. Epub 2009 Apr 17.

Peking-Yale Joint Center of Plant Molecular Genetics and Agrobiotechnology, College of Life Sciences, Peking University, Beijing 100871, China.

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http://www.plantcell.org/cgi/doi/10.1105/tpc.109.065714
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2685623PMC
April 2009

Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture.

Authors:
Lei Li Xiangfeng Wang Mian Xia Viktor Stolc Ning Su Zhiyu Peng Songgang Li Jun Wang Xiping Wang Xing Wang Deng

Genome Biol 2005 27;6(6):R52. Epub 2005 May 27.

Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT 06520, USA.

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http://dx.doi.org/10.1186/gb-2005-6-6-r52DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1175972PMC
August 2006