Publications by authors named "Zhenglong Gu"

65Publications

The Core and Distinction of the Gut Microbiota in Chinese Populations across Geography and Ethnicity.

Microorganisms 2020 Oct 14;8(10). Epub 2020 Oct 14.

Beijing Advanced Innovation Center for Food Nutrition and Human Health, Department of Nutrition and Health, China Agricultural University, Beijing 100083, China.

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http://dx.doi.org/10.3390/microorganisms8101579DOI Listing
October 2020

Assembly and Analysis of the Genome Sequence of the Yeast CBS 7540.

Microorganisms 2019 Oct 26;7(11). Epub 2019 Oct 26.

Department of Molecular Sciences, Swedish University of Agricultural Sciences, Box 7015, SE-75007 Uppsala, Sweden.

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http://dx.doi.org/10.3390/microorganisms7110489DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6921048PMC
October 2019

Evidence of Neutral Evolution of Mitochondrial DNA in Human Hepatocellular Carcinoma.

Genome Biol Evol 2019 10;11(10):2909-2916

Beijing Advanced Innovation Center for Food Nutrition and Human Health, College of Biological Sciences, China Agricultural University, Beijing 100193, China.

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http://dx.doi.org/10.1093/gbe/evz214DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6804334PMC
October 2019

Heteroplasmy concordance between mitochondrial DNA and RNA.

Sci Rep 2019 09 10;9(1):12942. Epub 2019 Sep 10.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, 14853, USA.

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http://dx.doi.org/10.1038/s41598-019-49279-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6737107PMC
September 2019

Mitochondrial DNA Mutation, Diseases, and Nutrient-Regulated Mitophagy.

Annu Rev Nutr 2019 08;39:201-226

Division of Nutritional Sciences, Cornell University, Ithaca, New York 14853, USA; email:

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http://dx.doi.org/10.1146/annurev-nutr-082018-124643DOI Listing
August 2019

Understand the genomic diversity and evolution of fungal pathogen Candida glabrata by genome-wide analysis of genetic variations.

Methods 2020 04 3;176:82-90. Epub 2019 May 3.

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14850, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ymeth.2019.05.002DOI Listing
April 2020

Acute psychological stress increases serum circulating cell-free mitochondrial DNA.

Psychoneuroendocrinology 2019 08 28;106:268-276. Epub 2019 Mar 28.

Department of Psychiatry, Division of Behavioral Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA; New York State Psychiatric Institute, New York, NY, 10032, USA; Department of Neurology, H. Houston Merritt Center, Columbia Translational Neuroscience Initiative, Columbia University Irving Medical Center, New York, NY, 10032, USA; Columbia Aging Center, Columbia University Mailman School of Public Health, New York, NY, 10032, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S03064530183121
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http://dx.doi.org/10.1016/j.psyneuen.2019.03.026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6589121PMC
August 2019

Associations of Mitochondrial and Nuclear Mitochondrial Variants and Genes with Seven Metabolic Traits.

Authors:
Aldi T Kraja Chunyu Liu Jessica L Fetterman Mariaelisa Graff Christian Theil Have Charles Gu Lisa R Yanek Mary F Feitosa Dan E Arking Daniel I Chasman Kristin Young Symen Ligthart W David Hill Stefan Weiss Jian'an Luan Franco Giulianini Ruifang Li-Gao Fernando P Hartwig Shiow J Lin Lihua Wang Tom G Richardson Jie Yao Eliana P Fernandez Mohsen Ghanbari Mary K Wojczynski Wen-Jane Lee Maria Argos Sebastian M Armasu Ruteja A Barve Kathleen A Ryan Ping An Thomas J Baranski Suzette J Bielinski Donald W Bowden Ulrich Broeckel Kaare Christensen Audrey Y Chu Janie Corley Simon R Cox Andre G Uitterlinden Fernando Rivadeneira Cheryl D Cropp E Warwick Daw Diana van Heemst Lisa de Las Fuentes He Gao Ioanna Tzoulaki Tarunveer S Ahluwalia Renée de Mutsert Leslie S Emery A Mesut Erzurumluoglu James A Perry Mao Fu Nita G Forouhi Zhenglong Gu Yang Hai Sarah E Harris Gibran Hemani Steven C Hunt Marguerite R Irvin Anna E Jonsson Anne E Justice Nicola D Kerrison Nicholas B Larson Keng-Hung Lin Latisha D Love-Gregory Rasika A Mathias Joseph H Lee Matthias Nauck Raymond Noordam Ken K Ong James Pankow Amit Patki Alison Pattie Astrid Petersmann Qibin Qi Rasmus Ribel-Madsen Rebecca Rohde Kevin Sandow Theresia M Schnurr Tamar Sofer John M Starr Adele M Taylor Alexander Teumer Nicholas J Timpson Hugoline G de Haan Yujie Wang Peter E Weeke Christine Williams Hongsheng Wu Wei Yang Donglin Zeng Daniel R Witte Bruce S Weir Nicholas J Wareham Henrik Vestergaard Stephen T Turner Christian Torp-Pedersen Evie Stergiakouli Wayne Huey-Herng Sheu Frits R Rosendaal M Arfan Ikram Oscar H Franco Paul M Ridker Thomas T Perls Oluf Pedersen Ellen A Nohr Anne B Newman Allan Linneberg Claudia Langenberg Tuomas O Kilpeläinen Sharon L R Kardia Marit E Jørgensen Torben Jørgensen Thorkild I A Sørensen Georg Homuth Torben Hansen Mark O Goodarzi Ian J Deary Cramer Christensen Yii-Der Ida Chen Aravinda Chakravarti Ivan Brandslund Klaus Bonnelykke Kent D Taylor James G Wilson Santiago Rodriguez Gail Davies Bernardo L Horta Bharat Thyagarajan D C Rao Niels Grarup Victor G Davila-Roman Gavin Hudson Xiuqing Guo Donna K Arnett Caroline Hayward Dhananjay Vaidya Dennis O Mook-Kanamori Hemant K Tiwari Daniel Levy Ruth J F Loos Abbas Dehghan Paul Elliott Afshan N Malik Robert A Scott Diane M Becker Mariza de Andrade Michael A Province James B Meigs Jerome I Rotter Kari E North

Am J Hum Genet 2019 01 27;104(1):112-138. Epub 2018 Dec 27.

Department of Epidemiology, University of North Carolina, Chapel Hill, NC 27516, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ajhg.2018.12.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323610PMC
January 2019

Glucomannan Hydrolysate Promotes Gut Proliferative Homeostasis and Extends Life Span in Drosophila melanogaster.

J Gerontol A Biol Sci Med Sci 2019 09;74(10):1549-1556

Division of Nutritional Sciences, Cornell University, Ithaca, New York.

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http://dx.doi.org/10.1093/gerona/gly189DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6748797PMC
September 2019

A novel FADS2 isoform identified in human milk fat globule suppresses FADS2 mediated Δ6-desaturation of omega-3 fatty acids.

Prostaglandins Leukot Essent Fatty Acids 2018 11 28;138:52-59. Epub 2018 Jun 28.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, United States; Dell Pediatric Research Institute, Dell Medical School, The University of Texas at Austin, Austin, TX, United States. Electronic address:

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http://dx.doi.org/10.1016/j.plefa.2018.06.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6218299PMC
November 2018

Novel insights into global translational regulation through Pumilio family RNA-binding protein Puf3p revealed by ribosomal profiling.

Curr Genet 2019 Feb 27;65(1):201-212. Epub 2018 Jun 27.

Division of Nutritional Sciences, Cornell University, 312 Savage Hall, Ithaca, NY, 14853, USA.

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http://link.springer.com/10.1007/s00294-018-0862-4
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http://dx.doi.org/10.1007/s00294-018-0862-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6666313PMC
February 2019

Independent impacts of aging on mitochondrial DNA quantity and quality in humans.

BMC Genomics 2017 Nov 21;18(1):890. Epub 2017 Nov 21.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, 14853, USA.

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http://dx.doi.org/10.1186/s12864-017-4287-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5697406PMC
November 2017

Parallel Evolution of Chromatin Structure Underlying Metabolic Adaptation.

Mol Biol Evol 2017 Nov;34(11):2870-2878

Division of Nutritional Sciences, Cornell University, Ithaca, NY.

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http://dx.doi.org/10.1093/molbev/msx220DOI Listing
November 2017

Convergent and divergent genetic changes in the genome of Chinese and European pigs.

Sci Rep 2017 08 17;7(1):8662. Epub 2017 Aug 17.

Beijing Advanced Innovation Center for Food Nutrition and Human Health, College of Biological Sciences, China Agricultural University, Beijing, P. R. China.

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http://dx.doi.org/10.1038/s41598-017-09061-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5561219PMC
August 2017

Association of mitochondrial DNA variants with myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS) symptoms.

J Transl Med 2016 12 20;14(1):342. Epub 2016 Dec 20.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, 14853, USA.

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http://dx.doi.org/10.1186/s12967-016-1104-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5175376PMC
December 2016

Very Short Mitochondrial DNA Fragments and Heteroplasmy in Human Plasma.

Sci Rep 2016 11 4;6:36097. Epub 2016 Nov 4.

Division of Nutritional Sciences, Cornell University, Ithaca, New York 14853, USA.

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http://dx.doi.org/10.1038/srep36097DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5095883PMC
November 2016

Genetic Evidence for Elevated Pathogenicity of Mitochondrial DNA Heteroplasmy in Autism Spectrum Disorder.

PLoS Genet 2016 Oct 28;12(10):e1006391. Epub 2016 Oct 28.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, United States of America.

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https://dx.plos.org/10.1371/journal.pgen.1006391
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http://dx.doi.org/10.1371/journal.pgen.1006391DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5085253PMC
October 2016

Coordinated Evolution of Transcriptional and Post-Transcriptional Regulation for Mitochondrial Functions in Yeast Strains.

PLoS One 2016 14;11(4):e0153523. Epub 2016 Apr 14.

Division of Nutritional Sciences, Cornell University, Ithaca, New York 14853, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0153523PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4831757PMC
August 2016

Mitochondrial DNA variants correlate with symptoms in myalgic encephalomyelitis/chronic fatigue syndrome.

J Transl Med 2016 Jan 20;14:19. Epub 2016 Jan 20.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY, 14853, USA.

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http://dx.doi.org/10.1186/s12967-016-0771-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4719218PMC
January 2016

A robust and efficient method for estimating enzyme complex abundance and metabolic flux from expression data.

Comput Biol Chem 2015 Dec 1;59 Pt B:98-112. Epub 2015 Sep 1.

Tri-Institutional Training Program in Computational Biology and Medicine, 1300 York Avenue, Box 194, New York, NY, USA.

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http://dx.doi.org/10.1016/j.compbiolchem.2015.08.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4684447PMC
December 2015

Natural selection on HFE in Asian populations contributes to enhanced non-heme iron absorption.

BMC Genet 2015 Jun 10;16:61. Epub 2015 Jun 10.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, USA.

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http://dx.doi.org/10.1186/s12863-015-0223-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4460683PMC
June 2015

Evolution of gene regulation during transcription and translation.

Genome Biol Evol 2015 Apr 14;7(4):1155-67. Epub 2015 Apr 14.

Division of Nutritional Sciences, Cornell University, Ithaca

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http://dx.doi.org/10.1093/gbe/evv059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4419805PMC
April 2015

Dynamic epistasis under varying environmental perturbations.

PLoS One 2015 27;10(1):e0114911. Epub 2015 Jan 27.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, United States of America; Tri-Institutional Training Program in Computational Biology and Medicine, New York, New York, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0114911PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4308068PMC
January 2016

Diminishing returns in next-generation sequencing (NGS) transcriptome data.

Gene 2015 Feb 10;557(1):82-7. Epub 2014 Dec 10.

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, PR China. Electronic address:

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http://dx.doi.org/10.1016/j.gene.2014.12.013DOI Listing
February 2015

Coordinating expression of RNA binding proteins with their mRNA targets.

Sci Rep 2014 Nov 24;4:7175. Epub 2014 Nov 24.

Division of Nutritional Sciences, Cornell University, Ithaca, New York 14853, USA.

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http://dx.doi.org/10.1038/srep07175DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4241525PMC
November 2014

Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals.

Proc Natl Acad Sci U S A 2014 Jul 7;111(29):10654-9. Epub 2014 Jul 7.

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14853;

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http://dx.doi.org/10.1073/pnas.1403521111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4115537PMC
July 2014

Genome structure and dynamics of the yeast pathogen Candida glabrata.

FEMS Yeast Res 2014 Jun 10;14(4):529-35. Epub 2014 Mar 10.

Department of Biology, Lund University, Lund, Sweden.

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http://dx.doi.org/10.1111/1567-1364.12145DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4320752PMC
June 2014

Human expression QTLs are enriched in signals of environmental adaptation.

Genome Biol Evol 2013 ;5(9):1689-701

Division of Nutritional Sciences, Cornell University.

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http://dx.doi.org/10.1093/gbe/evt124DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3787676PMC
April 2014

Computational approaches for understanding energy metabolism.

Wiley Interdiscip Rev Syst Biol Med 2013 Nov-Dec;5(6):733-50. Epub 2013 Jul 29.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, USA.

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http://doi.wiley.com/10.1002/wsbm.1238
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http://dx.doi.org/10.1002/wsbm.1238DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3906216PMC
October 2014

High-resolution view of bacteriophage lambda gene expression by ribosome profiling.

Proc Natl Acad Sci U S A 2013 Jul 28;110(29):11928-33. Epub 2013 Jun 28.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1073/pnas.1309739110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3718152PMC
July 2013

Dynamic epistasis for different alleles of the same gene.

Proc Natl Acad Sci U S A 2012 Jun 11;109(26):10420-5. Epub 2012 Jun 11.

Division of Nutritional Sciences, Department of Molecular Biology and Genetics, and Tri-Institutional Training Program in Computational Biology and Medicine, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1073/pnas.1121507109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387062PMC
June 2012

Rewiring of posttranscriptional RNA regulons: Puf4p in fungi as an example.

Mol Biol Evol 2012 Sep 21;29(9):2169-76. Epub 2012 Mar 21.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, USA.

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http://dx.doi.org/10.1093/molbev/mss085DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3424410PMC
September 2012

Recent advances in understanding the role of nutrition in human genome evolution.

Adv Nutr 2011 Nov 3;2(6):486-96. Epub 2011 Nov 3.

Division of Nutritional Sciences, Cornell University, Ithaca, NY, USA.

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http://dx.doi.org/10.3945/an.111.001024DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3226386PMC
November 2011

A conserved structural determinant located at the interdomain region of mammalian inositol-requiring enzyme 1alpha.

J Biol Chem 2011 Sep 13;286(35):30859-66. Epub 2011 Jul 13.

Graduate Program in Nutrition, Cornell University, Ithaca, New York 14853, USA.

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http://dx.doi.org/10.1074/jbc.M111.273714DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3162446PMC
September 2011

Predominant gain of promoter TATA box after gene duplication associated with stress responses.

Mol Biol Evol 2011 Oct 22;28(10):2893-904. Epub 2011 Apr 22.

MOE Key Laboratory of Contemporary Anthropology and Center for Evolutionary Biology, School of Life Sciences and Institutes of Biomedical Sciences, Fudan University, Shanghai 200433, China.

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http://dx.doi.org/10.1093/molbev/msr116DOI Listing
October 2011

Growth of novel epistatic interactions by gene duplication.

Genome Biol Evol 2011 14;3:295-301. Epub 2011 Mar 14.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, USA.

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http://dx.doi.org/10.1093/gbe/evr016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3274824PMC
August 2011

The baker's yeast diploid genome is remarkably stable in vegetative growth and meiosis.

PLoS Genet 2010 Sep 9;6(9):e1001109. Epub 2010 Sep 9.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1001109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2936533PMC
September 2010

Tinkering evolution of post-transcriptional RNA regulons: puf3p in fungi as an example.

PLoS Genet 2010 Jul 22;6(7):e1001030. Epub 2010 Jul 22.

Division of Nutritional Sciences, Cornell University, Ithaca, New York, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1001030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2908677PMC
July 2010

Yeasts as models in evolutionary biology.

Genome Biol 2009 2;10(3):304. Epub 2009 Mar 2.

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1186/gb-2009-10-3-304DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2690994PMC
July 2009

Differential selection on gene translation efficiency between the filamentous fungus Ashbya gossypii and yeasts.

BMC Evol Biol 2008 Dec 29;8:343. Epub 2008 Dec 29.

Division of Nutritional Sciences, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1186/1471-2148-8-343DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2632675PMC
December 2008

Evolution of RNases in leaf monkeys: being parallel gene duplications or parallel gene conversions is a problem of molecular phylogeny.

Mol Phylogenet Evol 2009 Feb 13;50(2):397-400. Epub 2008 Nov 13.

Department of Molecular Biology and Genetics, Cornell University, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1016/j.ympev.2008.11.003DOI Listing
February 2009

Regulation dynamics of WGD genes during yeast metabolic oscillation.

Mol Biol Evol 2008 Dec 23;25(12):2513-6. Epub 2008 Sep 23.

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http://dx.doi.org/10.1093/molbev/msn212DOI Listing
December 2008

Relaxation of yeast mitochondrial functions after whole-genome duplication.

Genome Res 2008 Sep 30;18(9):1466-71. Epub 2008 Jul 30.

Division of Nutritional Sciences, Cornell University, Ithaca, New York 14853, USA.

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http://dx.doi.org/10.1101/gr.074674.107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2527710PMC
September 2008

Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.

Proc Natl Acad Sci U S A 2007 Jul 25;104(31):12825-30. Epub 2007 Jul 25.

Bioinformatics Center, Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Graduate School of the Chinese Academy of Sciences, Shanghai 200031, People's Republic of China.

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http://dx.doi.org/10.1073/pnas.0701291104DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1933262PMC
July 2007

Rapid evolution in a pair of recent duplicate segments of rice.

J Exp Zool B Mol Dev Evol 2007 Jan;308(1):50-7

CAS-Max Planck Junior Research Group, Key Laboratory of Cellular and Molecular Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China.

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http://dx.doi.org/10.1002/jez.b.21122DOI Listing
January 2007

Molecular mechanisms involved in robustness of yeast central metabolism against null mutations.

J Biochem 2005 Feb;137(2):177-87

Argonne National Laboratory, Mathematics and Computer Science Division, Argonne, IL 60439, USA.

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http://dx.doi.org/10.1093/jb/mvi017DOI Listing
February 2005

Elevated evolutionary rates in the laboratory strain of Saccharomyces cerevisiae.

Proc Natl Acad Sci U S A 2005 Jan 12;102(4):1092-7. Epub 2005 Jan 12.

Stanford Genome Technology Center, 855 California Avenue, Palo Alto, CA 94304, USA.

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http://dx.doi.org/10.1073/pnas.0409159102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC545845PMC
January 2005

Higher gene duplicabilities for metabolic proteins than for nonmetabolic proteins in yeast and E. coli.

J Mol Evol 2004 Dec;59(6):806-14

Mathematics & Computer Science Division, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, IL 60439, USA.

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http://dx.doi.org/10.1007/s00239-004-0068-xDOI Listing
December 2004

Comparative methods for the analysis of gene-expression evolution: an example using yeast functional genomic data.

Mol Biol Evol 2005 Jan 8;22(1):40-50. Epub 2004 Sep 8.

Ecology and Evolution, University of Chicago, USA.

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http://dx.doi.org/10.1093/molbev/msh257DOI Listing
January 2005

Duplicate genes increase gene expression diversity within and between species.

Nat Genet 2004 Jun 2;36(6):577-9. Epub 2004 May 2.

Department of Ecology & Evolution, University of Chicago, 1101 East 57th Street, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1038/ng1355DOI Listing
June 2004

Different evolutionary patterns between young duplicate genes in the human genome.

Genome Biol 2003 1;4(9):R56. Epub 2003 Sep 1.

Department of Ecology and Evolution, University of Chicago, East 57th Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1186/gb-2003-4-9-r56DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC193656PMC
December 2003

Detection of gene duplications and block duplications in eukaryotic genomes.

J Struct Funct Genomics 2003 ;3(1-4):27-34

Department of Ecology and Evolution, University of Chicago, 1101 East 57th Street, Chicago, IL 60637, USA.

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July 2003

Rate of protein evolution versus fitness effect of gene deletion.

Mol Biol Evol 2003 May 2;20(5):772-4. Epub 2003 Apr 2.

Department of Ecology and Evolution, The University of Chicago, USA.

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http://dx.doi.org/10.1093/molbev/msg078DOI Listing
May 2003

Patterns of gene duplication in Saccharomyces cerevisiae and Caenorhabditis elegans.

J Mol Evol 2003 Jan;56(1):28-37

Department of Ecology and Evolution, University of Chicago, 1101 East 57th Street, Chicago, IL 60637, USA.

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http://dx.doi.org/10.1007/s00239-002-2377-2DOI Listing
January 2003

Role of duplicate genes in genetic robustness against null mutations.

Nature 2003 Jan;421(6918):63-6

Department of Ecology & Evolution, University of Chicago, 1101 East 57th Street, Chicago, Illinois 60637, USA.

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http://dx.doi.org/10.1038/nature01198DOI Listing
January 2003

Rapid divergence in expression between duplicate genes inferred from microarray data.

Trends Genet 2002 Dec;18(12):609-13

Dept of Ecology and Evolution, University of Chicago, 1101 East 57th Street, 60637, Chicago, IL, USA.

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http://dx.doi.org/10.1016/s0168-9525(02)02837-8DOI Listing
December 2002

Extent of gene duplication in the genomes of Drosophila, nematode, and yeast.

Mol Biol Evol 2002 Mar;19(3):256-62

Department of Ecology and Evolution, University of Chicago, Chicago, IL 60637, USA.

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http://academic.oup.com/mbe/article/19/3/256/981014
Publisher Site
http://dx.doi.org/10.1093/oxfordjournals.molbev.a004079DOI Listing
March 2002