Zbynek Kozmik

Zbynek Kozmik

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Zbynek Kozmik

Publications by authors named "Zbynek Kozmik"

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Targeted deletion of Crb1/Crb2 in the optic vesicle models key features of leber congenital amaurosis 8.

Dev Biol 2019 Sep 28;453(2):141-154. Epub 2019 May 28.

Shriners Hospitals Pediatric Research Center, Department of Anatomy and Cell Biology, Lewis Katz School of Medicine, Temple University, Philadelphia, PA, 19140, USA.

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http://dx.doi.org/10.1016/j.ydbio.2019.05.008DOI Listing
September 2019

Liver-Specific, but Not Retina-Specific, Hepcidin Knockout Causes Retinal Iron Accumulation and Degeneration.

Am J Pathol 2019 Sep 6;189(9):1814-1830. Epub 2019 Jul 6.

F.M. Kirby Center for Molecular Ophthalmology, Scheie Eye Institute, Perelman School of Medicine at the University of Pennsylvania, 305 Stellar-Chance Laboratory, Philadelphia, Pennsylvania. Electronic address:

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http://dx.doi.org/10.1016/j.ajpath.2019.05.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6723216PMC
September 2019

An opsin 5-dopamine pathway mediates light-dependent vascular development in the eye.

Nat Cell Biol 2019 04 1;21(4):420-429. Epub 2019 Apr 1.

The Visual Systems Group, Abrahamson Pediatric Eye Institute, Division of Pediatric Ophthalmology, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.

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http://dx.doi.org/10.1038/s41556-019-0301-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6573021PMC
April 2019

The Amphioxus Model System.

Authors:
Zbynek Kozmik

Int J Dev Biol 2017 ;61(10-11-12):571-574

Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic.

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http://dx.doi.org/10.1387/ijdb.170332zkDOI Listing
January 2019

Amphioxus photoreceptors - insights into the evolution of vertebrate opsins, vision and circadian rhythmicity.

Int J Dev Biol 2017 ;61(10-11-12):665-681

Laboratory of Transcriptional Regulation, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic.

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http://dx.doi.org/10.1387/ijdb.170230zkDOI Listing
January 2019

The opsin repertoire of the European lancelet: a window into light detection in a basal chordate.

Int J Dev Biol 2017 ;61(10-11-12):763-772

Laboratory of Eye Biology, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic, Division BIOCEV, Vestec, Czech Republic.

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http://dx.doi.org/10.1387/ijdb.170139zkDOI Listing
January 2019

Novel polyclonal antibodies as a useful tool for expression studies in amphioxus embryos.

Int J Dev Biol 2017 ;61(10-11-12):793-800

Laboratory of Transcriptional Regulation, Institute of Molecular Genetics of the Czech Academy of Sciences, Prague, Czech Republic.

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http://dx.doi.org/10.1387/ijdb.170259ikDOI Listing
January 2019

Wnt/β-catenin signalling is necessary for gut differentiation in a marine annelid, .

Evodevo 2018 11;9:14. Epub 2018 Jun 11.

1Institute of Molecular Genetics, Czech Academy of Sciences, Vídeňská 1083, 142 20 Prague 4, Czech Republic.

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http://dx.doi.org/10.1186/s13227-018-0100-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5996498PMC
June 2018

Tcf7L2 is essential for neurogenesis in the developing mouse neocortex.

Neural Dev 2018 05 11;13(1). Epub 2018 May 11.

Institute of Molecular Genetics of the Czech Academy of Sciences, Vídeňská 1084, 14200, Prague, Czech Republic.

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http://dx.doi.org/10.1186/s13064-018-0107-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5946422PMC
May 2018

Asymmetric pitx2 expression in medaka epithalamus is regulated by nodal signaling through an intronic enhancer.

Dev Genes Evol 2018 03 16;228(2):131-139. Epub 2018 Apr 16.

Institute of Molecular Genetics of the Czech Academy of Sciences, Videnska 1083, 142 20, Prague, Czech Republic.

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http://dx.doi.org/10.1007/s00427-018-0611-1DOI Listing
March 2018

The Bmp signaling pathway regulates development of left-right asymmetry in amphioxus.

Dev Biol 2018 02 7;434(1):164-174. Epub 2017 Dec 7.

Institute of Molecular Genetics, The Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.

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http://dx.doi.org/10.1016/j.ydbio.2017.12.004DOI Listing
February 2018

The role of transposable elements in functional evolution of amphioxus genome: the case of opsin gene family.

Sci Rep 2018 02 6;8(1):2506. Epub 2018 Feb 6.

Laboratory of Eye Biology, Institute of Molecular Genetics of the ASCR, v.v.i., Division BIOCEV, Prumyslová 595, 252 50, Vestec, Czech Republic.

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http://www.nature.com/articles/s41598-018-20683-9
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http://dx.doi.org/10.1038/s41598-018-20683-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5802833PMC
February 2018

Polycomb repression complex 2 is required for the maintenance of retinal progenitor cells and balanced retinal differentiation.

Dev Biol 2018 01 12;433(1):47-60. Epub 2017 Nov 12.

Laboratory of Eye Biology, Division BIOCEV, Institute of Molecular Genetics of the Czech Academy of Sciences, Prumyslova 595, Vestec, Czech Republic; Laboratory of Transcriptional Regulation, Institute of Molecular Genetics of the Czech Academy of Sciences, Videnska 1083, Prague 4, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2017.11.004DOI Listing
January 2018

The Gene Regulatory Network of Lens Induction Is Wired through Meis-Dependent Shadow Enhancers of Pax6.

PLoS Genet 2016 Dec 5;12(12):e1006441. Epub 2016 Dec 5.

Laboratory of Transcriptional Regulation, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic v.v.i., Prague, Czech Republic.

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http://dx.doi.org/10.1371/journal.pgen.1006441DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137874PMC
December 2016

Manipulating Wnt signaling at different subcellular levels affects the fate of neonatal neural stem/progenitor cells.

Brain Res 2016 11 19;1651:73-87. Epub 2016 Sep 19.

Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Videnska 1083, 142 20 Prague 4, Czech Republic; 2(nd) Faculty of Medicine, Charles University in Prague, V Uvalu 84, 150 06 Prague 5, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.brainres.2016.09.026DOI Listing
November 2016

Conserved Noncoding Elements in the Most Distant Genera of Cephalochordates: The Goldilocks Principle.

Genome Biol Evol 2016 08 25;8(8):2387-405. Epub 2016 Aug 25.

Marine Biology Research Division, Scripps Institution of Oceanography, UC San Diego, La Jolla, California

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http://dx.doi.org/10.1093/gbe/evw158DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5010895PMC
August 2016

Tcf7l1 protects the anterior neural fold from adopting the neural crest fate.

Development 2016 06;143(12):2206-16

Institute of Molecular Genetics, Academy of Science of the Czech Republic, Prague 142 20, Czech Republic.

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http://dx.doi.org/10.1242/dev.132357DOI Listing
June 2016

Zoology: A New Mouth for Amphioxus.

Curr Biol 2016 05;26(9):R367-8

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1016/j.cub.2016.03.016DOI Listing
May 2016

vox homeobox gene: a novel regulator of midbrain-hindbrain boundary development in medaka fish?

Dev Genes Evol 2016 Mar 10;226(2):99-107. Epub 2016 Mar 10.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, Prague 4, Czech Republic.

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http://dx.doi.org/10.1007/s00427-016-0533-8DOI Listing
March 2016

Non-essential role for cilia in coordinating precise alignment of lens fibres.

Mech Dev 2016 Feb 26;139:10-7. Epub 2016 Jan 26.

Save Sight Institute, The University of Sydney, Sydney, NSW 2000, Australia.

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http://dx.doi.org/10.1016/j.mod.2016.01.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4789115PMC
February 2016

Gene regulation in amphioxus: An insight from transgenic studies in amphioxus and vertebrates.

Mar Genomics 2015 Dec 18;24 Pt 2:159-66. Epub 2015 Jun 18.

Institute of Molecular Genetics of the Academy of Sciences, Videnska 1083, 142 20 Prague 4, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.margen.2015.06.003DOI Listing
December 2015

Meis2 is essential for cranial and cardiac neural crest development.

BMC Dev Biol 2015 Nov 6;15:40. Epub 2015 Nov 6.

Institute of Molecular Genetics, The Czech Academy of Sciences, 14200, Praha, Czech Republic.

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http://dx.doi.org/10.1186/s12861-015-0093-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4636814PMC
November 2015

Cubozoan genome illuminates functional diversification of opsins and photoreceptor evolution.

Sci Rep 2015 Jul 8;5:11885. Epub 2015 Jul 8.

Department of Transcriptional Regulation, Institute of Molecular Genetics, Videnska 1083, Prague, CZ-14220, Czech Republic.

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http://www.nature.com/articles/srep11885
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http://dx.doi.org/10.1038/srep11885DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5155618PMC
July 2015

Pax2/5/8 and Pax6 alternative splicing events in basal chordates and vertebrates: a focus on paired box domain.

Front Genet 2015 2;6:228. Epub 2015 Jul 2.

Department of Transcriptional Regulation, Institute of Molecular Genetics Prague, Czech Republic.

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http://dx.doi.org/10.3389/fgene.2015.00228DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4488758PMC
July 2015

Onecut1 and Onecut2 transcription factors operate downstream of Pax6 to regulate horizontal cell development.

Dev Biol 2015 Jun 18;402(1):48-60. Epub 2015 Mar 18.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 14420 Prague 4, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2015.02.023DOI Listing
June 2015

The Nodal signaling pathway controls left-right asymmetric development in amphioxus.

Evodevo 2015 17;6. Epub 2015 Feb 17.

Institute of Cellular and Organismic Biology, Academia Sinica, 128 Academia Road, Section 2, Nankang, Taipei 11529 Taiwan ; Institute of Oceanography, National Taiwan University, 1 Roosevelt Road, Section 4, Taipei, 10617 Taiwan.

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http://dx.doi.org/10.1186/2041-9139-6-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423147PMC
May 2015

Genetic interaction between Pax6 and β-catenin in the developing retinal pigment epithelium.

Dev Genes Evol 2015 Apr 18;225(2):121-8. Epub 2015 Feb 18.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, Prague 4, Czech Republic.

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http://dx.doi.org/10.1007/s00427-015-0493-4DOI Listing
April 2015

Ectopic activation of Wnt/β-catenin signaling in lens fiber cells results in cataract formation and aberrant fiber cell differentiation.

PLoS One 2013 30;8(10):e78279. Epub 2013 Oct 30.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic ; Department of Genetics and Microbiology, Faculty of Science, Charles University in Prague, Prague, Czech Republic.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0078279PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3813504PMC
February 2015

Stage-dependent requirement of neuroretinal Pax6 for lens and retina development.

Development 2014 Mar 12;141(6):1292-302. Epub 2014 Feb 12.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 14420 Prague 4, Czech Republic.

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http://dx.doi.org/10.1242/dev.098822DOI Listing
March 2014

A novel N-terminal motif is responsible for the evolution of neural crest-specific gene-regulatory activity in vertebrate FoxD3.

Dev Biol 2014 Jan 16;385(2):396-404. Epub 2013 Nov 16.

Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2013.11.010DOI Listing
January 2014

Generation of mRx-Cre transgenic mouse line for efficient conditional gene deletion in early retinal progenitors.

PLoS One 2013 7;8(5):e63029. Epub 2013 May 7.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0063029PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3646923PMC
December 2013

Essential role of Bmp signaling and its positive feedback loop in the early cell fate evolution of chordates.

Dev Biol 2013 Oct 7;382(2):538-54. Epub 2013 Aug 7.

Institute of Molecular Genetics, Videnska 1083, 142 20 Prague 4, Czech Republic. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2013.07.021DOI Listing
October 2013

The function and developmental expression of alternatively spliced isoforms of amphioxus and Xenopus laevis Pax2/5/8 genes: revealing divergence at the invertebrate to vertebrate transition.

J Exp Zool B Mol Dev Evol 2012 Nov 12;318(7):555-71. Epub 2012 Jul 12.

Institute of Marine Sciences, School of Biological Sciences, University of Portsmouth, Portsmouth, Hampshire, United Kingdom.

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http://doi.wiley.com/10.1002/jez.b.22460
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http://dx.doi.org/10.1002/jez.b.22460DOI Listing
November 2012

Molecular analysis of the amphioxus frontal eye unravels the evolutionary origin of the retina and pigment cells of the vertebrate eye.

Proc Natl Acad Sci U S A 2012 Sep 4;109(38):15383-8. Epub 2012 Sep 4.

Department of Transcriptional Regulation, Institute of Molecular Genetics, CZ-14220 Prague, Czech Republic.

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http://dx.doi.org/10.1073/pnas.1207580109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3458357PMC
September 2012

Shh expression in a rudimentary tooth offers new insights into development of the mouse incisor.

J Exp Zool B Mol Dev Evol 2011 Jul 31;316(5):347-58. Epub 2011 Mar 31.

Institute of Experimental Medicine, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1002/jez.b.21408DOI Listing
July 2011

A lens-specific co-injection marker for medaka transgenesis.

Biotechniques 2010 Mar;48(3):235-6

Department of Transcriptional Regulation, Institute of Molecular Genetics Prague, Czech Republic.

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http://dx.doi.org/10.2144/000113368DOI Listing
March 2010

Lens morphogenesis is dependent on Pax6-mediated inhibition of the canonical Wnt/beta-catenin signaling in the lens surface ectoderm.

Genesis 2010 Feb;48(2):86-95

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, 14420 Prague 4, Czech Republic.

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http://dx.doi.org/10.1002/dvg.20583DOI Listing
February 2010

Spatial and temporal regulation of Wnt/beta-catenin signaling is essential for development of the retinal pigment epithelium.

Dev Biol 2009 Oct 9;334(1):31-45. Epub 2009 Jul 9.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 142 20 Prague 4, Czech Republic.

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http://dx.doi.org/10.1016/j.ydbio.2009.07.002DOI Listing
October 2009

Eye evolution: common use and independent recruitment of genetic components.

Philos Trans R Soc Lond B Biol Sci 2009 Oct;364(1531):2819-32

Department of Transcriptional Regulation, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, Prague 4 CZ 14220, Czech Republic.

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http://dx.doi.org/10.1098/rstb.2009.0079DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2781861PMC
October 2009

Eye-specific expression of an ancestral jellyfish PaxB gene interferes with Pax6 function despite its conserved Pax6/Pax2 characteristics.

Int J Dev Biol 2009 ;53(4):469-82

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, 142 20 Prague 4, Czech Republic.

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http://dx.doi.org/10.1387/ijdb.082793jrDOI Listing
August 2009

Assembly of the cnidarian camera-type eye from vertebrate-like components.

Proc Natl Acad Sci U S A 2008 Jul 24;105(26):8989-93. Epub 2008 Jun 24.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 142 20 Prague 4, Czech Republic.

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http://dx.doi.org/10.1073/pnas.0800388105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2449352PMC
July 2008

Eye evolution: lens and cornea as an upgrade of animal visual system.

Semin Cell Dev Biol 2008 Apr 13;19(2):71-81. Epub 2007 Oct 13.

Department of Transcriptional Regulation, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague 4, Czech Republic.

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http://dx.doi.org/10.1016/j.semcdb.2007.10.005DOI Listing
April 2008

Cubozoan crystallins: evidence for convergent evolution of pax regulatory sequences.

Evol Dev 2008 Jan-Feb;10(1):52-61

Department of Transcriptional Regulation, Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 14220 Praha 4, Czech Republic.

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http://dx.doi.org/10.1111/j.1525-142X.2007.00213.xDOI Listing
April 2008

The role of Pax genes in eye evolution.

Authors:
Zbynek Kozmik

Brain Res Bull 2008 Mar 20;75(2-4):335-9. Epub 2007 Nov 20.

Institute of Molecular Genetics, Videnska 1083, Prague 4, Czech Republic.

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http://dx.doi.org/10.1016/j.brainresbull.2007.10.046DOI Listing
March 2008

A dynamic gradient of Wnt signaling controls initiation of neurogenesis in the mammalian cortex and cellular specification in the hippocampus.

Dev Biol 2007 Nov 28;311(1):223-37. Epub 2007 Aug 28.

Section for Cellular and Genetic Therapy, Institute of Microbiology, Center of Molecular Biology and Neuroscience, The National Hospital, N-1349 Oslo, Norway.

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http://linkinghub.elsevier.com/retrieve/pii/S001216060701299
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http://dx.doi.org/10.1016/j.ydbio.2007.08.038DOI Listing
November 2007

Abnormal lens morphogenesis and ectopic lens formation in the absence of beta-catenin function.

Genesis 2007 Apr;45(4):157-68

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1002/dvg.20277DOI Listing
April 2007

Wnt-mediated down-regulation of Sp1 target genes by a transcriptional repressor Sp5.

J Biol Chem 2007 Jan 6;282(2):1225-37. Epub 2006 Nov 6.

Institute of Molecular Genetics, Academy of Sciences of the Czech Republic, Videnska 1083, 142 20 Prague 4, Czech Republic.

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http://dx.doi.org/10.1074/jbc.M605851200DOI Listing
January 2007

The cellular fate of cortical progenitors is not maintained in neurosphere cultures.

Mol Cell Neurosci 2005 Nov 8;30(3):388-97. Epub 2005 Sep 8.

Institute of Molecular Genetics, Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.

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http://dx.doi.org/10.1016/j.mcn.2005.08.003DOI Listing
November 2005

The Optimedin gene is a downstream target of Pax6.

J Biol Chem 2005 Oct 22;280(42):35228-37. Epub 2005 Aug 22.

Section of Molecular Mechanisms of Glaucoma, Laboratory of Molecular and Developmental Biology, NEI, National Institutes of Health, Bethesda, Maryland 20892-0704, USA.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M506195200
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http://dx.doi.org/10.1074/jbc.M506195200DOI Listing
October 2005

Pax genes in eye development and evolution.

Authors:
Zbynek Kozmik

Curr Opin Genet Dev 2005 Aug;15(4):430-8

Institute of Molecular Genetics, Videnska 1083, 142 20 Praha 4, Czech Republic.

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http://dx.doi.org/10.1016/j.gde.2005.05.001DOI Listing
August 2005

Cubozoan jellyfish: an Evo/Devo model for eyes and other sensory systems.

Int J Dev Biol 2004 ;48(8-9):719-29

National Eye Institute, National Institutes of Health, Bethesda, Maryland 20892-0704, USA.

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http://dx.doi.org/10.1387/ijdb.041851jpDOI Listing
June 2005

DACH1 inhibits transforming growth factor-beta signaling through binding Smad4.

J Biol Chem 2003 Dec 2;278(51):51673-84. Epub 2003 Oct 2.

Lombardi Cancer Center, Department of Oncology, Georgetown University, Washington, D. C. 20057, USA.

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http://dx.doi.org/10.1074/jbc.M310021200DOI Listing
December 2003

Role of Pax genes in eye evolution: a cnidarian PaxB gene uniting Pax2 and Pax6 functions.

Dev Cell 2003 Nov;5(5):773-85

Laboratory of Molecular and Developmental Biology, National Eye Institute, National Institutes of Health, Bethesda, MD 20892, USA.

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November 2003

Cloning and developmental expression of amphioxus Dachschund.

Gene Expr Patterns 2003 Mar;3(1):65-9

Dipartimento di Biologia Sperimentale, Ambientale e Applicata, Università di Genova, viale Benedetto XV 5, 16132 Genova, Italy.

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March 2003

Gelsolin is a dorsalizing factor in zebrafish.

Proc Natl Acad Sci U S A 2003 Mar 10;100(6):3287-92. Epub 2003 Mar 10.

Laboratory of Molecular and Developmental Biology, National Eye Institute, National Institutes of Health, 6 Center Drive, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1073/pnas.0634473100DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC152284PMC
March 2003

Structure and expression of the scallop Omega-crystallin gene. Evidence for convergent evolution of promoter sequences.

J Biol Chem 2002 Jan 26;277(1):656-64. Epub 2001 Oct 26.

Laboratory of Molecular and Developmental Biology, National Eye Institute, National Institutes of Health, Bethesda, Maryland 20892-2730, USA.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M107004200
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http://dx.doi.org/10.1074/jbc.M107004200DOI Listing
January 2002