Yves Engelborghs

Yves Engelborghs

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Yves Engelborghs

Publications by authors named "Yves Engelborghs"

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Inhibition of Receptor Dimerization as a Novel Negative Feedback Mechanism of EGFR Signaling.

PLoS One 2015 14;10(10):e0139971. Epub 2015 Oct 14.

Laboratory of Biomolecular Network Dynamics, Biochemistry, Molecular and Structural Biology Section, Department of Chemistry, KU Leuven, Celestijnenlaan 200G box 2403, 3001, Heverlee, Belgium.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0139971PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4605717PMC
May 2016

In vitro phosphorylation does not influence the aggregation kinetics of WT α-synuclein in contrast to its phosphorylation mutants.

Int J Mol Sci 2014 Jan 15;15(1):1040-67. Epub 2014 Jan 15.

Laboratory of Biomolecular Dynamics, KU Leuven, Celestijnenlaan 200G, Leuven B-3001, Belgium.

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http://dx.doi.org/10.3390/ijms15011040DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3907855PMC
January 2014

Mammalian ribosomal and chaperone protein RPS3A counteracts α-synuclein aggregation and toxicity in a yeast model system.

Biochem J 2013 Nov;455(3):295-306

‡Biochemistry, Molecular and Structural Biology section, KU Leuven, Celestijnenlaan 200G, B-3001 Leuven-Heverlee, Flanders, Belgium.

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http://dx.doi.org/10.1042/BJ20130417DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3796869PMC
November 2013

The characterization of the nuclear dynamics of syntenin-2, a PIP2 binding PDZ protein.

Cytometry A 2013 Sep 8;83(9):866-75. Epub 2013 Jan 8.

Department of Chemistry, Faculty of Science, University of Leuven, Leuven, Belgium; Department of Human Genetics, Faculty of Medicine, University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1002/cyto.a.22246DOI Listing
September 2013

An elegant way to quantitatively analyze oligomer formation in solution.

Authors:
Yves Engelborghs

Biophys J 2012 Nov;103(9):1811-2

University of Leuven, Biomolecular Dynamics, Celestijnenlaan, Belgium.

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http://dx.doi.org/10.1016/j.bpj.2012.08.064DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3491677PMC
November 2012

Fluorescence lifetime measurements of intrinsically unstructured proteins: application to α-synuclein.

Methods Mol Biol 2012 ;895:461-6

Laboratory of Biomolecular Dynamics, University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1007/978-1-61779-927-3_27DOI Listing
October 2012

Fluorescence correlation spectroscopy to determine the diffusion coefficient of α-synuclein and follow early oligomer formation.

Methods Mol Biol 2012 ;895:499-506

Laboratory of Biomolecular Dynamics, University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1007/978-1-61779-927-3_29DOI Listing
October 2012

Tryptophan side chain conformers monitored by NMR and time-resolved fluorescence spectroscopies.

Proteins 2012 Jan 9;80(1):239-45. Epub 2011 Nov 9.

Department of Biochemistry, University of Alberta, Edmonton, Alberta, Canada.

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http://doi.wiley.com/10.1002/prot.23198
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http://dx.doi.org/10.1002/prot.23198DOI Listing
January 2012

Rational design of photoconvertible and biphotochromic fluorescent proteins for advanced microscopy applications.

Chem Biol 2011 Oct;18(10):1241-51

Laboratory of Photochemistry and Spectroscopy, Department of Chemistry, Katholieke Universiteit Leuven, 3001 Heverlee, Belgium.

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http://dx.doi.org/10.1016/j.chembiol.2011.08.007DOI Listing
October 2011

SAP-like domain in nucleolar spindle associated protein mediates mitotic chromosome loading as well as interphase chromatin interaction.

Biochem Biophys Res Commun 2011 Aug 18;411(4):732-7. Epub 2011 Jul 18.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Heverlee, Belgium.

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http://dx.doi.org/10.1016/j.bbrc.2011.07.015DOI Listing
August 2011

Both substrate hydrolysis and secondary substrate binding determine xylanase mobility as assessed by FRAP.

J Phys Chem B 2011 Apr 5;115(16):4810-7. Epub 2011 Apr 5.

Laboratory of Food Chemistry and Biochemistry & Leuven Food Science and Nutrition Research Centre (LFoRCe), Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1021/jp110963fDOI Listing
April 2011

The conformation and the aggregation kinetics of α-synuclein depend on the proline residues in its C-terminal region.

Biochemistry 2010 Nov;49(43):9345-52

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200G, Leuven, Belgium.

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http://dx.doi.org/10.1021/bi1010927DOI Listing
November 2010

Early aggregation steps in alpha-synuclein as measured by FCS and FRET: evidence for a contagious conformational change.

Biophys J 2010 Apr;98(7):1302-11

Laboratory of Biomolecular Dynamics, Department of Chemistry & BioSCENTer, University of Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1016/j.bpj.2009.12.4290DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2849099PMC
April 2010

Tryptophan conformations associated with partial unfolding in ribonuclease T1.

Biophys J 2009 Sep;97(6):1778-86

Laboratory of Quantum Chemistry and INPAC Institute for Nanoscale Physics and Chemistry, Katholieke Universiteit Leuven, Leuven, Belgium.

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https://linkinghub.elsevier.com/retrieve/pii/S00063495090123
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http://dx.doi.org/10.1016/j.bpj.2009.07.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2749795PMC
September 2009

Enzymatic investigation of the Staphylococcus aureus type I signal peptidase SpsB - implications for the search for novel antibiotics.

FEBS J 2009 Jun 29;276(12):3222-34. Epub 2009 Apr 29.

Laboratory of Bacteriology, Katholieke Universiteit Leuven, Belgium.

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http://dx.doi.org/10.1111/j.1742-4658.2009.07037.xDOI Listing
June 2009

The high-affinity peptidoglycan binding domain of Pseudomonas phage endolysin KZ144.

Biochem Biophys Res Commun 2009 May 5;383(2):187-91. Epub 2009 Apr 5.

Department of Biosystems, Division of Gene Technology, Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1016/j.bbrc.2009.03.161DOI Listing
May 2009

Exploration of the activation pathway of Deltaalpha-Chymotrypsin with molecular dynamics simulations and correlation with kinetic experiments.

Eur Biophys J 2008 Nov 27;38(1):13-23. Epub 2008 Aug 27.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200, Leuven, Belgium.

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http://dx.doi.org/10.1007/s00249-008-0348-2DOI Listing
November 2008

How do rotameric conformations influence the time-resolved fluorescence of tryptophan in proteins? A perspective based on molecular modeling and quantum chemistry.

Curr Protein Pept Sci 2008 Oct;9(5):427-46

Laboratory of Quantum Chemistry and INPAC Institute for Nanoscale Physics and Chemistry, Katholieke Universiteit Leuven, Celestijnenlaan 200F, Leuven, Belgium.

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http://dx.doi.org/10.2174/138920308785915236DOI Listing
October 2008

Diffusion of myelin oligodendrocyte glycoprotein in living OLN-93 cells investigated by raster-scanning image correlation spectroscopy (RICS).

J Fluoresc 2008 Sep 18;18(5):813-9. Epub 2008 Jan 18.

Laboratory for Biomolecular Dynamics, Catholic University Leuven, Celestijnenlaan 200G, 3001, Heverlee, Belgium.

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http://dx.doi.org/10.1007/s10895-007-0308-8DOI Listing
September 2008

Prolyl oligopeptidase stimulates the aggregation of alpha-synuclein.

Peptides 2008 Sep 15;29(9):1472-8. Epub 2008 May 15.

Laboratory for Medical Biochemistry, University of Antwerp, Universiteitsplein 1, 2610 Wilrijk, Belgium.

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http://dx.doi.org/10.1016/j.peptides.2008.05.005DOI Listing
September 2008

Dark states in monomeric red fluorescent proteins studied by fluorescence correlation and single molecule spectroscopy.

Biophys J 2008 May 30;94(10):4103-13. Epub 2008 Jan 30.

Laboratory of Biomolecular Dynamics, Department of Chemistry, Katholieke Universiteit Leuven, 3001 Heverlee, Belgium.

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http://dx.doi.org/10.1529/biophysj.107.123596DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2367191PMC
May 2008

A fast and sensitive method for measuring the integrity of siRNA-carrier complexes in full human serum.

J Control Release 2008 Feb 7;126(1):67-76. Epub 2007 Nov 7.

Laboratory of General Biochemistry and Physical Pharmacy, Faculty of Pharmacy, Ghent University, Harelbekestraat 72, 9000 Ghent, Belgium.

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http://linkinghub.elsevier.com/retrieve/pii/S016836590700580
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http://dx.doi.org/10.1016/j.jconrel.2007.10.024DOI Listing
February 2008

An unusual red-edge excitation and time-dependent Stokes shift in the single tryptophan mutant protein DD-carboxypeptidase from Streptomyces: the role of dynamics and tryptophan rotamers.

Protein Sci 2008 Feb 20;17(2):352-61. Epub 2007 Dec 20.

Laboratory of Biomolecular Dynamics, Department of Chemistry, University of Leuven, Celestijnenlaan 200 G, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1110/ps.073147608DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2222716PMC
February 2008

Structural characterisation of the hepatitis C envelope glycoprotein E1 ectodomain derived from a mammalian and a yeast expression system.

Vaccine 2008 Jan 21;26(3):399-410. Epub 2007 Nov 21.

Laboratory of Biomolecular Dynamics, KULeuven, Celestijnenlaan 200G, 3001 Leuven, Belgium.

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http://dx.doi.org/10.1016/j.vaccine.2007.11.004DOI Listing
January 2008

Association with coregulators is the major determinant governing peroxisome proliferator-activated receptor mobility in living cells.

J Biol Chem 2007 Feb 12;282(7):4417-26. Epub 2006 Dec 12.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit, Leuven B-3001, Belgium.

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http://dx.doi.org/10.1074/jbc.M608172200DOI Listing
February 2007

Role of quorum sensing and antimicrobial component production by Serratia plymuthica in formation of biofilms, including mixed biofilms with Escherichia coli.

Appl Environ Microbiol 2006 Nov 22;72(11):7294-300. Epub 2006 Sep 22.

Centre for Food and Microbial Technology, Department of Microbial and Molecular Systems, Faculty of Bioscience Engineering, Katholieke Universiteit Leuven, Kasteelpark Arenberg 22, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1128/AEM.01708-06DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1636202PMC
November 2006

Fast and reversible photoswitching of the fluorescent protein dronpa as evidenced by fluorescence correlation spectroscopy.

Biophys J 2006 Sep 23;91(5):L45-7. Epub 2006 Jun 23.

Laboratory of Photochemistry and Spectroscopy, Department of Chemistry, Katholieke Universiteit Leuven, 3001 Heverlee, Belgium.

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http://dx.doi.org/10.1529/biophysj.106.089789DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1544297PMC
September 2006

Probing diffusion laws within cellular membranes by Z-scan fluorescence correlation spectroscopy.

Biophys J 2006 Aug 2;91(3):L23-5. Epub 2006 Jun 2.

J. Heyrovský Institute of Physical Chemistry, Academy of Sciences of the Czech Republic, Prague, Czech Republic.

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http://dx.doi.org/10.1529/biophysj.106.089474DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1563743PMC
August 2006

Integrating nuclear receptor mobility in models of gene regulation.

Nucl Recept Signal 2006 28;4:e010. Epub 2006 Apr 28.

Center for Integrative Genomics, University of Lausanne, Lausanne, Switzerland.

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http://dx.doi.org/10.1621/nrs.04010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1472671PMC
July 2006

The protein phosphatase 2A phosphatase activator is a novel peptidyl-prolyl cis/trans-isomerase.

J Biol Chem 2006 Mar 27;281(10):6349-57. Epub 2005 Dec 27.

Afdeling Biochemie, Faculteit Geneeskunde, Katholieke Universiteit Leuven, Campus Gasthuisberg, Herestraat 49, B-3000 Leuven, Belgium.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M507760200
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http://dx.doi.org/10.1074/jbc.M507760200DOI Listing
March 2006

The aggregation of alpha-synuclein is stimulated by FK506 binding proteins as shown by fluorescence correlation spectroscopy.

FASEB J 2006 Mar 12;20(3):524-6. Epub 2006 Jan 12.

Laboratory of Biomolecular Dynamics, K.U. Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1096/fj.05-5126fjeDOI Listing
March 2006

Diffusion of sphingomyelin and myelin oligodendrocyte glycoprotein in the membrane of OLN-93 oligodendroglial cells studied by fluorescence correlation spectroscopy.

C R Biol 2005 Dec 2;328(12):1057-64. Epub 2005 Nov 2.

Biomedical Research Institute, Hasselt University, transnationale Universiteit Limburg (tUL), Universitaire Campus Bldgs. D and A, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1016/j.crvi.2005.09.008DOI Listing
December 2005

Measuring protein-protein interactions inside living cells using single color fluorescence correlation spectroscopy. Application to human immunodeficiency virus type 1 integrase and LEDGF/p75.

FASEB J 2005 Jun 23;19(8):1039-41. Epub 2005 Mar 23.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1096/fj.04-3373fjeDOI Listing
June 2005

Solvent-controlled organization of self-assembled polymeric monolayers on gold: an easy approach for the construction of protein resistant surfaces.

Langmuir 2005 Jun;21(13):5988-96

Biosensors Group, Interuniversity Microelectronics Center (IMEC), Kapeldreef 75, 3001 Leuven, Belgium.

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http://dx.doi.org/10.1021/la0471590DOI Listing
June 2005

Fluorescence imaging reveals the nuclear behavior of peroxisome proliferator-activated receptor/retinoid X receptor heterodimers in the absence and presence of ligand.

J Biol Chem 2005 May 24;280(18):17880-90. Epub 2005 Feb 24.

Center for Integrative Genomics, NCCR Frontiers in Genetics, University of Lausanne, CH-1015 Lausanne, Switzerland.

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http://dx.doi.org/10.1074/jbc.M500786200DOI Listing
May 2005

The interaction of LEDGF/p75 with integrase is lentivirus-specific and promotes DNA binding.

J Biol Chem 2005 May 4;280(18):17841-7. Epub 2005 Mar 4.

Laboratory for Molecular Virology and Gene Therapy, Katholieke Universiteit Leuven and Interdisciplinary Research Center Katholieke Universiteit Leuven Campus Kortrijk, Kapucijnenvoer 33, B-3000 Leuven, Flanders, Belgium.

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http://dx.doi.org/10.1074/jbc.M411681200DOI Listing
May 2005

Solution structure and internal dynamics of NSCP, a compact calcium-binding protein.

FEBS J 2005 Apr;272(8):2022-36

INSERM & Institut Curie, Centre Universitaire, Orsay, France.

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http://dx.doi.org/10.1111/j.1742-4658.2005.04629.xDOI Listing
April 2005

Stretched exponential decay and correlations in the catalytic activity of fluctuating single lipase molecules.

Proc Natl Acad Sci U S A 2005 Feb 4;102(7):2368-72. Epub 2005 Feb 4.

School of Chemistry, Raymond and Beverly Sackler Faculty of Exact Sciences, Tel Aviv University, Ramat Aviv, Tel Aviv 69978, Israel.

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http://dx.doi.org/10.1073/pnas.0409039102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC548972PMC
February 2005

Single-enzyme kinetics of CALB-catalyzed hydrolysis.

Angew Chem Int Ed Engl 2005 Jan;44(4):560-4

Institute of Molecules and Materials, Department of Organic Chemistry, Raboud University of Nijmegen, 6525 ED Nijmegen, The Netherlands.

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http://dx.doi.org/10.1002/anie.200460625DOI Listing
January 2005

Simulation of the activation of alpha-chymotrypsin: analysis of the pathway and role of the propeptide.

Protein Sci 2004 Dec;13(12):3139-50

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1110/ps.04825004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2287318PMC
December 2004

Experimental indication for the existence of multiple Trp rotamers in von Willebrand Factor A3 domain.

Proteins 2004 Nov;57(3):596-601

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1002/prot.20227DOI Listing
November 2004

Correct diffusion coefficients of proteins in fluorescence correlation spectroscopy. Application to tubulin oligomers induced by Mg2+ and Paclitaxel.

Biophys J 2004 Oct;87(4):2635-46

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200D, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1529/biophysj.104.040717DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1304682PMC
October 2004

A fluorescence stopped-flow kinetic study of the conformational activation of alpha-chymotrypsin and several mutants.

Protein Sci 2004 Sep;13(9):2533-40

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200D, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1110/ps.04709604DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2280002PMC
September 2004

Identification and characterization of a functional nuclear localization signal in the HIV-1 integrase interactor LEDGF/p75.

J Biol Chem 2004 Aug 25;279(32):33421-9. Epub 2004 May 25.

Department of Cancer Immunology and AIDS, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA.

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http://dx.doi.org/10.1074/jbc.M404700200DOI Listing
August 2004

Protein simulations: the absorption spectrum of barnase point mutants.

Protein Sci 2004 Jul;13(7):1823-31

Department of Chemistry, University of Leuven, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1110/ps.04652804DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2279920PMC
July 2004

Synergistic antifungal activity of two chitin-binding proteins from spindle tree (Euonymus europaeus L.).

Planta 2004 Jun 27;219(2):221-32. Epub 2004 Mar 27.

Laboratory of Phytopathology and Plant Protection, Katholieke Universiteit Leuven, Willem de Croylaan 42, 3001 Leuven, Belgium.

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http://dx.doi.org/10.1007/s00425-004-1238-1DOI Listing
June 2004

The dead-end elimination method, tryptophan rotamers, and fluorescence lifetimes.

Biophys J 2003 Sep;85(3):1894-902

Laboratory of Biomolecular Dynamics, Catholic University of Leuven, Heverlee, Belgium.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1303361PMC
http://dx.doi.org/10.1016/s0006-3495(03)74617-7DOI Listing
September 2003

LEDGF/p75 is essential for nuclear and chromosomal targeting of HIV-1 integrase in human cells.

J Biol Chem 2003 Aug 9;278(35):33528-39. Epub 2003 Jun 9.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200D, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1074/jbc.M303594200DOI Listing
August 2003

Tryptophan properties in fluorescence and functional stability of plasminogen activator inhibitor 1.

Biophys J 2003 Jul;85(1):501-10

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, B3001 Leuven, Belgium.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1303106PMC
http://dx.doi.org/10.1016/S0006-3495(03)74495-6DOI Listing
July 2003

Fluorescence correlation spectroscopy analysis of the dynamics of tubulin interaction with RB3, a stathmin family protein.

FEBS Lett 2003 Jul;546(2-3):365-8

Laboratory of Biomolecular Dynamics, University of Leuven, Celestijnenlaan 200D, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1016/s0014-5793(03)00636-7DOI Listing
July 2003

Identification and functional analysis of two Ca2+-binding EF-hand motifs in the B"/PR72 subunit of protein phosphatase 2A.

J Biol Chem 2003 Mar 10;278(12):10697-706. Epub 2003 Jan 10.

Division of Biochemistry, Faculty of Medicine, Katholieke Universiteit Leuven, Herestraat 49, Belgium.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M211717200
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http://dx.doi.org/10.1074/jbc.M211717200DOI Listing
March 2003

HIV-1 integrase forms stable tetramers and associates with LEDGF/p75 protein in human cells.

J Biol Chem 2003 Jan 28;278(1):372-81. Epub 2002 Oct 28.

Rega Institute for Medical Research, Katholieke Universiteit Leuven, Minderbroedersstraat 10, B-3000, Leuven, Belgium.

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http://dx.doi.org/10.1074/jbc.M209278200DOI Listing
January 2003

DNA-induced polymerization of HIV-1 integrase analyzed with fluorescence fluctuation spectroscopy.

J Biol Chem 2002 Oct 29;277(41):38045-52. Epub 2002 Jul 29.

Laboratory of Biomolecular Dynamics, Katholieke Universiteit Leuven, Celestijnenlaan 200D, B-3001 Leuven, Belgium.

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http://dx.doi.org/10.1074/jbc.M205842200DOI Listing
October 2002

Physical requirements for in vitro processing of the Streptomyces lividans signal peptidases.

J Biotechnol 2002 Jun;96(1):79-91

Laboratory of Bacteriology, Rega Institute, Katholieke Universiteit Leuven, Minderbroedersstraat 10, 3000, Leuven, Belgium.

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http://dx.doi.org/10.1016/s0168-1656(02)00039-1DOI Listing
June 2002