Publications by authors named "Yushen Du"

28 Publications

  • Page 1 of 1

Tracking HIV Rebound following Latency Reversal Using Barcoded HIV.

Cell Rep Med 2020 Dec 22;1(9):100162. Epub 2020 Dec 22.

Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, Los Angeles, CA 90095, USA.

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December 2020

Emerging roles of N6-methyladenosine (mA) modification in breast cancer.

Cell Biosci 2020 Nov 25;10(1):136. Epub 2020 Nov 25.

Department of Breast Surgery, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, 310009, Zhejiang, China.

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November 2020

Predominance of positive epistasis among drug resistance-associated mutations in HIV-1 protease.

PLoS Genet 2020 10 21;16(10):e1009009. Epub 2020 Oct 21.

Molecular and Medical Pharmacology, University of California, Los Angeles, CA 90095, USA.

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October 2020

Immunotherapy for EBV-Associated Nasopharyngeal Carcinoma.

Crit Rev Oncog 2018 ;23(3-4):219-234

Cancer Institute (Key Laboratory of Cancer Prevention and Intervention, China National Ministry of Education, Key Laboratory of Molecular Biology in Medical Sciences, Zhejiang Province, China), The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310009, China; ZJU-UCLA Joint Center for Medical Education and Research, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, Zhejiang University School of Medicine, Hangzhou 310058, Zhejiang Province, China; Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California at Los Angeles, Los Angeles, California 90095, USA.

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July 2019

Inhibition of murine herpesvirus-68 replication by IFN-gamma in macrophages is counteracted by the induction of SOCS1 expression.

PLoS Pathog 2018 08 3;14(8):e1007202. Epub 2018 Aug 3.

Cancer Institute (Key Laboratory of Cancer Prevention and Intervention, China National Ministry of Education, Key Laboratory of Molecular Biology in Medical Sciences, Zhejiang Province, China), The Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou, P. R. China.

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August 2018

Emergence of Integrase Resistance Mutations During Initial Therapy Containing Dolutegravir.

Clin Infect Dis 2018 08;67(5):791-794

Division of Infectious Diseases, Department of Medicine, David Geffen School of Medicine at University of California, Los Angeles (UCLA).

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August 2018

HIV-1 epitopes presented by MHC class I types associated with superior immune containment of viremia have highly constrained fitness landscapes.

PLoS Pathog 2017 Aug 7;13(8):e1006541. Epub 2017 Aug 7.

Department of Microbiology, Immunology & Molecular Genetics, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, United States of America.

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August 2017

In situ structures of the genome and genome-delivery apparatus in a single-stranded RNA virus.

Nature 2017 01 19;541(7635):112-116. Epub 2016 Dec 19.

Department of Molecular and Medical Pharmacology, University of California, Los Angeles (UCLA), Los Angeles, California 90095, USA.

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January 2017

Proteomic and phylogenetic coevolution analyses of pM79 and pM92 identify interactions with RNA polymerase II and delineate the murine cytomegalovirus late transcription complex.

J Gen Virol 2017 02 12;98(2):242-250. Epub 2017 Feb 12.

Division of Pediatric Rheumatology, Department of Pediatrics, Washington University School of Medicine, Saint Louis, MO 63110, USA.

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February 2017

A Herpesvirus Protein Selectively Inhibits Cellular mRNA Nuclear Export.

Cell Host Microbe 2016 Nov;20(5):642-653

Department of Molecular and Medical Pharmacology, University of California, Los Angeles, Los Angeles, CA 90095, USA. Electronic address:

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November 2016

Annotating Protein Functional Residues by Coupling High-Throughput Fitness Profile and Homologous-Structure Analysis.

mBio 2016 11 1;7(6). Epub 2016 Nov 1.

Department of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, California, USA

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November 2016

Coupling high-throughput genetics with phylogenetic information reveals an epistatic interaction on the influenza A virus M segment.

BMC Genomics 2016 Jan 12;17:46. Epub 2016 Jan 12.

Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California, Los Angeles, 90095, CA, USA.

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January 2016

MYC-induced reprogramming of glutamine catabolism supports optimal virus replication.

Nat Commun 2015 Nov 12;6:8873. Epub 2015 Nov 12.

Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California, Los Angeles, 90095 California, USA.

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November 2015

High-resolution genetic profile of viral genomes: why it matters.

Curr Opin Virol 2015 Oct 10;14:62-70. Epub 2015 Sep 10.

Department of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, CA 90095, United States; The Molecular Biology Institute, University of California Los Angeles, Los Angeles, CA 90095, United States. Electronic address:

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October 2015

Functional Constraint Profiling of a Viral Protein Reveals Discordance of Evolutionary Conservation and Functionality.

PLoS Genet 2015 Jul 1;11(7):e1005310. Epub 2015 Jul 1.

Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, United States of America,; Molecular Biology Institute, University of California, Los Angeles, Los Angeles, California, United States of America,; AIDS Institute, University of California, Los Angeles, Los Angeles, California, United States of America.

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July 2015

HIV-1 quasispecies delineation by tag linkage deep sequencing.

PLoS One 2014 19;9(5):e97505. Epub 2014 May 19.

Department of Molecular and Medical Pharmacology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, California, United States of America; Molecular Biology Institute, University of California Los Angeles, Los Angeles, California, United States of America; AIDS Institute, University of California Los Angeles, Los Angeles, California, United States of America.

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December 2014

A quantitative high-resolution genetic profile rapidly identifies sequence determinants of hepatitis C viral fitness and drug sensitivity.

PLoS Pathog 2014 Apr 10;10(4):e1004064. Epub 2014 Apr 10.

Department of Molecular and Medical Pharmacology, University of California Los Angeles, Los Angeles, California, United States of America; The Molecular Biology Institute, University of California Los Angeles, Los Angeles, California, United States of America; School of Medicine, Zhejiang University, Hangzhou, Zhejiang, China.

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April 2014

Culture, social class, and independence-interdependence: the case of Chinese adolescents.

Int J Psychol 2013 1;48(3):344-51. Epub 2012 Mar 1.

Department of Psychology, Chinese University of Hong Kong, Hong Kong.

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September 2013