Yuhua Yao

Yuhua Yao

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Yuhua Yao

Yuhua Yao

Publications by authors named "Yuhua Yao"

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Molecular Network-Based Drug Prediction in Thyroid Cancer.

Int J Mol Sci 2019 Jan 11;20(2). Epub 2019 Jan 11.

School of Mathematics and Statistics, Hainan Normal University, Haikou 570100, China.

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http://www.mdpi.com/1422-0067/20/2/263
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http://dx.doi.org/10.3390/ijms20020263DOI Listing
January 2019

Recent Advances on Prediction of Human Papillomaviruses Risk Types.

Curr Drug Metab 2019 Jan 17. Epub 2019 Jan 17.

School of Mathematics and Statistics, Hainan Normal University . China.

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http://dx.doi.org/10.2174/1389200220666190118110012DOI Listing
January 2019

A mitochondria-targeted near infrared ratiometric fluorescent probe for the detection of sulfite in aqueous and in living cells.

Talanta 2018 Nov 11;189:429-436. Epub 2018 Jul 11.

Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, East China University of Science & Technology, Shanghai 200237, China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00399140183071
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http://dx.doi.org/10.1016/j.talanta.2018.07.018DOI Listing
November 2018

Disease Sequences High-Accuracy Alignment Based on the Precision Medicine.

Biomed Res Int 2018 22;2018:1718046. Epub 2018 Feb 22.

School of Mathematics and Statistics, Hainan Normal University, Haikou, Hainan 571158, China.

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http://dx.doi.org/10.1155/2018/1718046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5842723PMC
September 2018

MTGIpick allows robust identification of genomic islands from a single genome.

Brief Bioinform 2018 05;19(3):361-373

Department of Biological Sciences, Center for Systems Biology, University of Texas at Dallas, Richardson, TX 75080, USA.

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http://dx.doi.org/10.1093/bib/bbw118DOI Listing
May 2018

Molecular Network-Based Identification of Competing Endogenous RNAs in Thyroid Carcinoma.

Genes (Basel) 2018 Jan 19;9(1). Epub 2018 Jan 19.

School of Mathematics and Statistics, Hainan Normal University, Haikou 570100, China.

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http://dx.doi.org/10.3390/genes9010044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5793195PMC
January 2018

Protein Sequence Comparison and DNA-binding Protein Identification with Generalized PseAAC and Graphical Representation.

Comb Chem High Throughput Screen 2018 ;21(2):100-110

School of Mathematics and Statistics, Hainan Normal University, Haikou 571158, China.

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http://www.eurekaselect.com/159478/article
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http://dx.doi.org/10.2174/1386207321666180130100838DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5930480PMC
January 2018

Matrix completion with side information and its applications in predicting the antigenicity of influenza viruses.

Bioinformatics 2017 Oct;33(20):3195-3201

School of Mathematics and Statistics, Hainan Normal University, Haikou 570100, China.

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http://dx.doi.org/10.1093/bioinformatics/btx390DOI Listing
October 2017

A Novel Protein Characterization Based on Pseudo Amino Acids Composition and Star-Like Graph Topological Indices.

Comb Chem High Throughput Screen 2017 ;20(4):328-337

College of Life Science, Zhejiang Sci-Tech University, Hangzhou 310018. China.

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http://dx.doi.org/10.2174/1386207320666170217152811DOI Listing
September 2017

A fluorescence turn-on probe for human (bovine) serum albumin based on the hydrolysis of a dioxaborine group promoted by proteins.

Chem Commun (Camb) 2017 Jun;53(48):6432-6435

Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China.

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http://dx.doi.org/10.1039/c7cc03587jDOI Listing
June 2017

Highly sensitive detection of cysteine over glutathione and homo-cysteine: New insight into the Michael addition of mercapto group to maleimide.

Biosens Bioelectron 2017 May 7;91:553-559. Epub 2017 Jan 7.

Shanghai Key Laboratory of Functional Materials Chemistry, School of Chemistry & Molecular Engineering, East China University of Science & Technology, Shanghai 200237, China. Electronic address:

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http://dx.doi.org/10.1016/j.bios.2017.01.013DOI Listing
May 2017

Predicting influenza antigenicity from Hemagglutintin sequence data based on a joint random forest method.

Sci Rep 2017 05 8;7(1):1545. Epub 2017 May 8.

School of Mathematics and Statistics, Hainan Normal University, Haikou, 570100, P. R. China.

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http://dx.doi.org/10.1038/s41598-017-01699-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5431489PMC
May 2017

Subcellular localization prediction of apoptosis proteins based on evolutionary information and support vector machine.

Artif Intell Med 2017 05 24;78:41-46. Epub 2017 May 24.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China; School of Mathematics and Statistics, Hainan Normal University, Haikou 571158, China. Electronic address:

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http://dx.doi.org/10.1016/j.artmed.2017.05.007DOI Listing
May 2017

A multiple information fusion method for predicting subcellular locations of two different types of bacterial protein simultaneously.

Biosystems 2016 Jan 24;139:37-45. Epub 2015 Dec 24.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China. Electronic address:

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http://dx.doi.org/10.1016/j.biosystems.2015.12.002DOI Listing
January 2016

Phylogenetic analysis of H7N9 avian influenza virus based on a novel mathematical descriptor.

Biomed Res Int 2014 16;2014:519787. Epub 2014 Jun 16.

School of Science, Zhejiang Sci-Tech University, Hangzhou 310018, China.

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http://dx.doi.org/10.1155/2014/519787DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4082857PMC
October 2015

Prediction of high-risk types of human papillomaviruses using statistical model of protein "sequence space".

Comput Math Methods Med 2015 20;2015:756345. Epub 2015 Apr 20.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China ; Center for Systems Biology, University of Texas at Dallas, Richardson, TX 75080, USA.

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http://dx.doi.org/10.1155/2015/756345DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4418008PMC
October 2015

Number of distinct sequence alignments with k-match and match sections.

Comput Biol Med 2015 Aug 6;63:287-92. Epub 2015 Mar 6.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China; Center for Systems Biology, University of Texas at Dallas, Richardson, TX 75080, USA. Electronic address:

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http://dx.doi.org/10.1016/j.compbiomed.2015.02.017DOI Listing
August 2015

Prediction of protein structural classes for low-similarity sequences using reduced PSSM and position-based secondary structural features.

Gene 2015 Jan 24;554(2):241-8. Epub 2014 Oct 24.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China; Department of Molecular and Cell Biology, University of Texas at Dallas, Richardson, TX 75080, USA. Electronic address:

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http://match.pmf.kg.ac.rs/electronic_versions/Match73/n3/mat
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http://downloads.hindawi.com/journals/cmmm/2015/370756.pdf
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http://linkinghub.elsevier.com/retrieve/pii/S037811191401197
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http://dx.doi.org/10.1016/j.gene.2014.10.037DOI Listing
January 2015

A protein structural classes prediction method based on PSI-BLAST profile.

J Theor Biol 2014 Jul 4;353:19-23. Epub 2014 Mar 4.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, Zhejiang 310018, PR China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00225193140010
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http://dx.doi.org/10.1016/j.jtbi.2014.02.034DOI Listing
July 2014

Similarity/Dissimilarity analysis of protein sequences based on a new spectrum-like graphical representation.

Evol Bioinform Online 2014 12;10:87-96. Epub 2014 Jun 12.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, China.

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http://dx.doi.org/10.4137/EBO.S14713DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4068907PMC
July 2014

High-accuracy prediction of protein structural classes using PseAA structural properties and secondary structural patterns.

Biochimie 2014 Jun 8;101:104-12. Epub 2014 Jan 8.

College of Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China.

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http://dx.doi.org/10.1016/j.biochi.2013.12.021DOI Listing
June 2014

A novel descriptor of protein sequences and its application.

J Theor Biol 2014 Apr 10;347:109-17. Epub 2014 Jan 10.

College of Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China.

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http://dx.doi.org/10.1016/j.jtbi.2014.01.001DOI Listing
April 2014

Differential gene expressions of the MAPK signaling pathway in enterovirus 71-infected rhabdomyosarcoma cells.

Braz J Infect Dis 2013 Jul-Aug;17(4):410-7. Epub 2013 Jun 21.

Department of Clinical Laboratory, Third Affiliated Hospital of Suzhou University, Changzhou, Jiangsu, China. :

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http://dx.doi.org/10.1016/j.bjid.2012.11.009DOI Listing
January 2014

Study of LZ-word distribution and its application for sequence comparison.

J Theor Biol 2013 Nov 19;336:52-60. Epub 2013 Jul 19.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China. Electronic address:

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http://dx.doi.org/10.1016/j.jtbi.2013.07.008DOI Listing
November 2013

Two Novel 30K Proteins Overexpressed in Baculovirus System and Their Antiapoptotic Effect in Insect and Mammalian Cells.

Int J Genomics 2013 3;2013:323592. Epub 2013 Jun 3.

Institute of Biochemistry, Zhejiang Sci-Tech University, Hangzhou 310018, China ; Zhejiang Provincial Key Laboratroy of Silkworm Bioreactor and Biomedicine, Hangzhou 310018, China.

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http://dx.doi.org/10.1155/2013/323592DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3686079PMC
July 2013

Comparison study on statistical features of predicted secondary structures for protein structural class prediction: From content to position.

BMC Bioinformatics 2013 May 4;14:152. Epub 2013 May 4.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, China.

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http://dx.doi.org/10.1186/1471-2105-14-152DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3652764PMC
May 2013

A 3D graphical representation of protein sequences based on the Gray code.

J Theor Biol 2012 Jul 1;304:81-7. Epub 2012 Apr 1.

College of Science, Zhejiang Sci-Tech University, Hangzhou 310018, PR China.

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http://dx.doi.org/10.1016/j.jtbi.2012.03.023DOI Listing
July 2012

Using Markov model to improve word normalization algorithm for biological sequence comparison.

Amino Acids 2012 May 20;42(5):1867-77. Epub 2011 Apr 20.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou, 310018, People's Republic of China.

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http://link.springer.com/10.1007/s00726-011-0906-2
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http://dx.doi.org/10.1007/s00726-011-0906-2DOI Listing
May 2012

Numerical characteristics of word frequencies and their application to dissimilarity measure for sequence comparison.

J Theor Biol 2011 May 18;276(1):174-80. Epub 2011 Feb 18.

College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, People's Republic of China.

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http://dx.doi.org/10.1016/j.jtbi.2011.02.005DOI Listing
May 2011

Using Gaussian model to improve biological sequence comparison.

J Comput Chem 2010 Jan;31(2):351-61

Institute for Biomedical Engineering and Instrumentation, Hangzhou Dianzi University, Hangzhou 310018, People's Republic of China.

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http://doi.wiley.com/10.1002/jcc.21322
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http://dx.doi.org/10.1002/jcc.21322DOI Listing
January 2010