Yoshinobu Igarashi

Yoshinobu Igarashi

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Yoshinobu Igarashi

Yoshinobu Igarashi

Publications by authors named "Yoshinobu Igarashi"

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22Publications

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Isoflurane is a suitable alternative to ether for anesthetizing rats prior to euthanasia for gene expression analysis.

J Toxicol Sci 2017 ;42(4):491-497

Toxicogenomics Informatics Project, National Institute of Biomedical Innovation, Health and Nutrition.

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http://dx.doi.org/10.2131/jts.42.491DOI Listing
October 2017

Quantifying the relative immune cell activation from whole tissue/organ-derived differentially expressed gene data.

Sci Rep 2017 10 9;7(1):12847. Epub 2017 Oct 9.

Vaccine Dynamics Project, BIKEN Innovative Vaccine Research Alliance Laboratories, Osaka University, Osaka, 565-0871, Japan.

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http://dx.doi.org/10.1038/s41598-017-12970-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5634445PMC
October 2017

Interactive Toxicogenomics: Gene set discovery, clustering and analysis in Toxygates.

Sci Rep 2017 05 3;7(1):1390. Epub 2017 May 3.

Bioinformatics Project, National Institutes of Biomedical Innovation, Health and Nutrition (NIBIOHN), 7-6-8, Asagi, Saito, Ibaraki-shi, Osaka, 567-0085, Japan.

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http://www.nature.com/articles/s41598-017-01500-1
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http://dx.doi.org/10.1038/s41598-017-01500-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5431224PMC
May 2017

Advax, a Delta Inulin Microparticle, Potentiates In-built Adjuvant Property of Co-administered Vaccines.

EBioMedicine 2017 Feb 1;15:127-136. Epub 2016 Dec 1.

Laboratory of Adjuvant Innovation, National Institutes of Biomedical Innovation, Health and Nutrition, Osaka 567-0085, Japan; Laboratory of Vaccine Science, WPI Immunology Frontier Research Centre, Osaka University, Osaka 565-0871, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2016.11.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5233800PMC
February 2017

Functional characterization of importin α8 as a classical nuclear localization signal receptor.

Biochim Biophys Acta 2015 Oct 26;1853(10 Pt A):2676-83. Epub 2015 Jul 26.

Biomolecular Dynamics Laboratory, Department of Frontier Bioscience, Graduate School of Frontier Bioscience, Osaka University, 1-3 Yamada-oka, Suita, Osaka 565-0871, Japan; Laboratory of Biomedical Innovation, Graduate School of Pharmaceutical Sciences, Osaka University, Suita, Osaka 565-0871, Japan; National Institutes of Biomedical Innovation, Health and Nutrition, 7-6-8 Saito-Asagi, Ibaraki, Osaka 567-0085, Japan. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01674889150025
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http://dx.doi.org/10.1016/j.bbamcr.2015.07.017DOI Listing
October 2015

Implementation of linked data in the life sciences at BioHackathon 2011.

J Biomed Semantics 2015 7;6. Epub 2015 Jan 7.

Department of Bioclinical informatics, Tohoku Medical Megabank Organization, Tohoku University, Seiryo-cho 4-1, Aoba-ku, Sendai-shi Miyagi, 980-8575 Japan.

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http://dx.doi.org/10.1186/2041-1480-6-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4429360PMC
May 2015

Open TG-GATEs: a large-scale toxicogenomics database.

Nucleic Acids Res 2015 Jan 13;43(Database issue):D921-7. Epub 2014 Oct 13.

Toxicogenomics Informatics Project, National Institute of Biomedical Innovation, Osaka 567-0085, Japan

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http://academic.oup.com/nar/article/43/D1/D921/2439524/Open-
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http://dx.doi.org/10.1093/nar/gku955DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4384023PMC
January 2015

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

J Biomed Semantics 2014 Feb 5;5(1). Epub 2014 Feb 5.

Database Center for Life Science, Research Organization of Information and Systems, 2-11-16, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1186/2041-1480-5-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978116PMC
February 2014

Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform.

Bioinformatics 2013 Dec 17;29(23):3080-6. Epub 2013 Sep 17.

National Institute of Biomedical Innovation, 7-6-8 Saito-Asagi, Ibaraki City, Osaka 567-0085, Japan and Centre for Knowledge Structuring, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

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http://dx.doi.org/10.1093/bioinformatics/btt531DOI Listing
December 2013

Evaluation of DNA microarray results in the Toxicogenomics Project (TGP) consortium in Japan.

J Toxicol Sci 2012 ;37(4):791-801

Toxicogenomics Project, National Institute of Biomedical Innovation, Osaka, Japan.

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http://dx.doi.org/10.2131/jts.37.791DOI Listing
December 2012

Sagace: a web-based search engine for biomedical databases in Japan.

BMC Res Notes 2012 Oct 31;5:604. Epub 2012 Oct 31.

Department of Fundamental Research, National Institute of Biomedical Innovation, 7-6-8 Saito Asagi, Ibaraki, Osaka, Japan.

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http://dx.doi.org/10.1186/1756-0500-5-604DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3532241PMC
October 2012

Effects of DMSO on gene expression in human and rat hepatocytes.

Hum Exp Toxicol 2011 Oct 21;30(10):1701-9. Epub 2011 Feb 21.

Environmental Health Science Laboratory, Sumitomo Chemical Co., Ltd., Konohana-ku, Osaka, Japan.

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http://journals.sagepub.com/doi/10.1177/0960327111399325
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http://dx.doi.org/10.1177/0960327111399325DOI Listing
October 2011

Prediction model of potential hepatocarcinogenicity of rat hepatocarcinogens using a large-scale toxicogenomics database.

Toxicol Appl Pharmacol 2011 Sep 19;255(3):297-306. Epub 2011 Jul 19.

Drug Developmental Research Laboratories, Shionogi & Co., Ltd., 3-1-1 Futaba-cho, Toyonaka, Osaka 561-0825, Japan.

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http://dx.doi.org/10.1016/j.taap.2011.07.001DOI Listing
September 2011

Structural determinants of limited proteolysis.

J Proteome Res 2011 Aug 8;10(8):3642-51. Epub 2011 Jul 8.

Sanford-Burnham Medical Research Institute, 10901 North Torrey Pines Road, La Jolla, California 92037, USA.

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http://dx.doi.org/10.1021/pr200271wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3164237PMC
August 2011

PMAP: databases for analyzing proteolytic events and pathways.

Nucleic Acids Res 2009 Jan 8;37(Database issue):D611-8. Epub 2008 Oct 8.

The Center on Proteolytic Pathways, The Cancer Research Center and The Inflammatory and Infectious Disease Center, The Burnham Institute for Medical Research, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1093/nar/gkn683DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686432PMC
January 2009

CutDB: a proteolytic event database.

Nucleic Acids Res 2007 Jan 16;35(Database issue):D546-9. Epub 2006 Nov 16.

Burnham Institute for Medical Research, 10901 North Torrey Pines Road, La Jolla, CA 92037, USA.

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http://dx.doi.org/10.1093/nar/gkl813DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1669773PMC
January 2007

The evolutionary repertoires of the eukaryotic-type ABC transporters in terms of the phylogeny of ATP-binding domains in eukaryotes and prokaryotes.

Mol Biol Evol 2004 Nov 5;21(11):2149-60. Epub 2004 Aug 5.

Bioinformatics Center, Institute for Chemical Research, Kyoto University Uji, Kyoto, Japan.

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http://dx.doi.org/10.1093/molbev/msh226DOI Listing
November 2004