Yoshimasa Tsuruoka

Yoshimasa Tsuruoka

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Yoshimasa Tsuruoka

Yoshimasa Tsuruoka

Publications by authors named "Yoshimasa Tsuruoka"

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17Publications

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[Deep Learning and Natural Language Processing].

Brain Nerve 2019 Jan;71(1):45-55

Department of Information and Communication Engineering, Graduate School of Information Science and Technology, The University of Tokyo.

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http://dx.doi.org/10.11477/mf.1416201215DOI Listing
January 2019

Identifying synonymy between relational phrases using word embeddings.

J Biomed Inform 2015 Aug 22;56:94-102. Epub 2015 May 22.

Japan Advanced Institute of Science and Technology, 1-8 Asahidai, Nomi-shi, Ishikawa 923-1292, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.jbi.2015.05.010DOI Listing
August 2015

Wide-coverage relation extraction from MEDLINE using deep syntax.

BMC Bioinformatics 2015 Apr 1;16:107. Epub 2015 Apr 1.

School of Information Science, Japan Advanced Institute of Science and Technology, Ishikawa, Japan.

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http://dx.doi.org/10.1186/s12859-015-0538-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4396593PMC
April 2015

Discovering and visualizing indirect associations between biomedical concepts.

Bioinformatics 2011 Jul;27(13):i111-9

School of Information Science, Japan Advanced Institute of Science and Technology (JAIST), Nomi, Japan.

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http://dx.doi.org/10.1093/bioinformatics/btr214DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3117364PMC
July 2011

AGRA: analysis of gene ranking algorithms.

Bioinformatics 2011 Apr 23;27(8):1185-6. Epub 2011 Feb 23.

Faculty of Health Sciences, University of Maribor, Maribor, Slovenia.

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http://dx.doi.org/10.1093/bioinformatics/btr097DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3072556PMC
April 2011

FACTA: a text search engine for finding associated biomedical concepts.

Bioinformatics 2008 Nov 4;24(21):2559-60. Epub 2008 Sep 4.

School of Computer Science, The University of Manchester, Manchester, UK.

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http://dx.doi.org/10.1093/bioinformatics/btn469DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2572701PMC
November 2008

How to make the most of NE dictionaries in statistical NER.

BMC Bioinformatics 2008 Nov 19;9 Suppl 11:S5. Epub 2008 Nov 19.

School of Computer Science, University of Manchester, 131 Princess Street, Manchester M17DN, UK.

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http://dx.doi.org/10.1186/1471-2105-9-S11-S5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2586754PMC
November 2008

Accelerating the annotation of sparse named entities by dynamic sentence selection.

BMC Bioinformatics 2008 Nov 19;9 Suppl 11:S8. Epub 2008 Nov 19.

School of Computer Science, The University of Manchester, MIB, 131 Princess Street, Manchester M17DN, UK.

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http://dx.doi.org/10.1186/1471-2105-9-S11-S8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2586757PMC
November 2008

Normalizing biomedical terms by minimizing ambiguity and variability.

BMC Bioinformatics 2008 Apr 11;9 Suppl 3:S2. Epub 2008 Apr 11.

School of Computer Science, The University of Manchester, MIB, 131 Princess Street, Manchester, M1 7DN, UK.

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http://dx.doi.org/10.1186/1471-2105-9-S3-S2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2352870PMC
April 2008

Filling the gaps between tools and users: a tool comparator, using protein-protein interaction as an example.

Pac Symp Biocomput 2008 :616-27

Department of Computer Science, University of Tokyo Hongo 7-3-1, Bunkyo-ku, Tokyo 113-0033, Tokyo.

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March 2008

Learning string similarity measures for gene/protein name dictionary look-up using logistic regression.

Bioinformatics 2007 Oct 12;23(20):2768-74. Epub 2007 Aug 12.

School of Computer Science, The University of Manchester, Manchester, UK.

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http://dx.doi.org/10.1093/bioinformatics/btm393DOI Listing
October 2007

Extraction of gene-disease relations from Medline using domain dictionaries and machine learning.

Pac Symp Biocomput 2006 :4-15

Tsujii Laboratory, Room 615, 7th Building of Science, University of Tokyo, Hongo 7-3-1, Bunkyo-ku, Tokyo, 113-0033, Japan.

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January 2007

Automatic recognition of topic-classified relations between prostate cancer and genes using MEDLINE abstracts.

BMC Bioinformatics 2006 Nov 24;7 Suppl 3:S4. Epub 2006 Nov 24.

Department of Computer Science, Graduate School of Information Science and Technology, The University of Tokyo, Tokyo, Japan.

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http://dx.doi.org/10.1186/1471-2105-7-S3-S4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1764448PMC
November 2006

Indexing anatomical concepts to OMIM Clinical Synopsis using the UMLS Metathesaurus.

In Silico Biol 2004 28;4(1):31-54. Epub 2003 Dec 28.

Biological Information Research Center, National Institute of Advanced Industrial Science and Technology.

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December 2004

Improving the performance of dictionary-based approaches in protein name recognition.

J Biomed Inform 2004 Dec;37(6):461-70

CREST, Japan Science and Technology (JST) Agency, Honcho 4-1-8, Kawaguchi-shi, Saitama 332-0012, Japan.

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http://dx.doi.org/10.1016/j.jbi.2004.08.003DOI Listing
December 2004