Yohei Kirino

Yohei Kirino

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miR-1 is a novel biomarker for polymyositis/dermatomyositis-associated interstitial lung disease.

Mod Rheumatol 2019 Sep 18:1-6. Epub 2019 Sep 18.

Department of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine , Yokohama , Japan.

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http://dx.doi.org/10.1080/14397595.2019.1661584DOI Listing
September 2019

Exploration of CCA-added RNAs revealed the expression of mitochondrial non-coding RNAs regulated by CCA-adding enzyme.

RNA Biol 2019 Sep 12:1-9. Epub 2019 Sep 12.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University , Philadelphia , PA , USA.

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http://dx.doi.org/10.1080/15476286.2019.1664885DOI Listing
September 2019

Short RNA regulators: the past, the present, the future, and implications for precision medicine and health disparities.

Curr Opin Biotechnol 2019 Aug 16;58:202-210. Epub 2019 Jul 16.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, 1020 Locust Street, Philadelphia, PA 19107, United States. Electronic address:

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http://dx.doi.org/10.1016/j.copbio.2019.05.014DOI Listing
August 2019

tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities.

Cancer Res 2019 Jun 17;79(12):3034-3049. Epub 2019 Apr 17.

Computational Medicine Center, Thomas Jefferson University, Philadelphia, Pennsylvania.

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http://dx.doi.org/10.1158/0008-5472.CAN-19-0789DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6571059PMC
June 2019

Clinical and Genetic Aspects of Behçet's Disease in Japan.

Intern Med 2019 May 10;58(9):1199-1207. Epub 2019 Jan 10.

Department of Stem Cell and Immune Regulation, Yokohama City University, Graduate School of Medicine, Japan.

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http://dx.doi.org/10.2169/internalmedicine.2035-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6543215PMC
May 2019

Dysfunction of TRIM21 in interferon signature of systemic lupus erythematosus.

Mod Rheumatol 2018 Nov 23;28(6):993-1003. Epub 2018 Feb 23.

a Department of Stem Cell and Immune Regulation , Yokohama City University Graduate School of Medicine , Yokohama , Japan.

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http://dx.doi.org/10.1080/14397595.2018.1436028DOI Listing
November 2018

Generation of 2',3'-Cyclic Phosphate-Containing RNAs as a Hidden Layer of the Transcriptome.

Front Genet 2018 27;9:562. Epub 2018 Nov 27.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, United States.

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http://dx.doi.org/10.3389/fgene.2018.00562DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6277466PMC
November 2018

GWAS-identified CCR1 and IL10 loci contribute to M1 macrophage-predominant inflammation in Behçet's disease.

Arthritis Res Ther 2018 06 12;20(1):124. Epub 2018 Jun 12.

Yokohama City University Graduate School of Medicine, Department of Stem Cell and Immune Regulation, Yokohama, Japan.

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http://dx.doi.org/10.1186/s13075-018-1613-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5998575PMC
June 2018

Dumbbell-PCR for Discriminative Quantification of a Small RNA Variant.

Methods Mol Biol 2018 ;1680:65-73

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, 1020 Locust Street, JAH Suite #M77, Philadelphia, PA, 19107, USA.

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http://dx.doi.org/10.1007/978-1-4939-7339-2_4DOI Listing
May 2018

Dysregulated heme oxygenase-1 M2-like macrophages augment lupus nephritis via Bach1 induced by type I interferons.

Arthritis Res Ther 2018 04 10;20(1):64. Epub 2018 Apr 10.

Department of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-Ku, Yokohama, 236-0004, Japan.

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http://dx.doi.org/10.1186/s13075-018-1568-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5894134PMC
April 2018

Diagnostic test accuracy of ultrasound for synovitis in rheumatoid arthritis: systematic review and meta-analysis.

Rheumatology (Oxford) 2018 01;57(1):49-58

Leeds Institute of Rheumatic and Musculoskeletal Medicine, University of Leeds NIHR Leeds Musculoskeletal Biomedical Research Unit, Leeds Teaching Hospitals NHS Trust, Leeds, UK.

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http://dx.doi.org/10.1093/rheumatology/kex036DOI Listing
January 2018

MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects.

Nucleic Acids Res 2018 01;46(D1):D152-D159

Computational Medicine Center, Sidney Kimmel Medical College at Thomas Jefferson University, Jefferson Alumni Hall #M81, Thomas Jefferson University, 1020 Locust Street, Philadelphia, PA 19107, USA.

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http://academic.oup.com/nar/article/46/D1/D152/4653530
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http://dx.doi.org/10.1093/nar/gkx1075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5753276PMC
January 2018

The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells.

Nucleic Acids Res 2017 Sep;45(15):9108-9120

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, USA.

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http://dx.doi.org/10.1093/nar/gkx537DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5587776PMC
September 2017

Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells.

Sci Rep 2017 06 23;7(1):4110. Epub 2017 Jun 23.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/s41598-017-04429-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5482885PMC
June 2017

Musculoskeletal ultrasonography delineates ankle symptoms in rheumatoid arthritis.

Mod Rheumatol 2017 May 1;27(3):425-429. Epub 2016 Sep 1.

a Department of Stem Cell and Immune Regulation , Yokohama City University Graduate School of Medicine , Yokohama , Japan.

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http://dx.doi.org/10.1080/14397595.2016.1222650DOI Listing
May 2017

YAMAT-seq: an efficient method for high-throughput sequencing of mature transfer RNAs.

Nucleic Acids Res 2017 May;45(9):e70

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, USA.

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http://dx.doi.org/10.1093/nar/gkx005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5605243PMC
May 2017

Non-IgG4-related Multifocal Fibrosclerosis.

Intern Med 2016 1;55(17):2497-502. Epub 2016 Sep 1.

Department of Stem Cell and Immune Regulation, Yokohama City University Graduate School of Medicine, Japan.

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http://dx.doi.org/10.2169/internalmedicine.55.6297DOI Listing
March 2017

5'-Terminal nucleotide variations in human cytoplasmic tRNAHisGUG and its 5'-halves.

RNA 2017 02 22;23(2):161-168. Epub 2016 Nov 22.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania 19107, USA.

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http://dx.doi.org/10.1261/rna.058024.116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5238791PMC
February 2017

Predicting joint destruction in rheumatoid arthritis with power Doppler, anti-citrullinated peptide antibody, and joint swelling.

Mod Rheumatol 2015 30;25(6):842-8. Epub 2015 Apr 30.

a Department of Internal Medicine and Clinical Immunology , Yokohama City University Graduate School of Medicine , Yokohama, Kanagawa , Japan.

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http://dx.doi.org/10.3109/14397595.2015.1026025DOI Listing
September 2016

Morphological and histomorphological structures of testes and ovaries in early developmental stages of the silkworm, .

J Insect Biotechnol Sericology 2016 28;85(1):15-20. Epub 2016 Apr 28.

Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba 277-8562, Japan.

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http://dx.doi.org/10.11416/jibs.85.1_015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5609476PMC
April 2016

Selective amplification and sequencing of cyclic phosphate-containing RNAs by the cP-RNA-seq method.

Nat Protoc 2016 Mar 11;11(3):476-89. Epub 2016 Feb 11.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/nprot.2016.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4852555PMC
March 2016

Consequential considerations when mapping tRNA fragments.

BMC Bioinformatics 2016 Mar 10;17:123. Epub 2016 Mar 10.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, 1020 Locust Street, Philadelphia, PA, 19107, USA.

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http://dx.doi.org/10.1186/s12859-016-0921-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4785646PMC
March 2016

SHOT-RNAs: A novel class of tRNA-derived functional RNAs expressed in hormone-dependent cancers.

Mol Cell Oncol 2016 Mar 23;3(2):e1079672. Epub 2015 Nov 23.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University , Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1080/23723556.2015.1079672DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4905382PMC
March 2016

Four-leaf clover qRT-PCR: A convenient method for selective quantification of mature tRNA.

RNA Biol 2015 ;12(5):501-8

a Computational Medicine Center ; Sidney Kimmel Medical College ; Thomas Jefferson University ; Philadelphia , PA USA.

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http://dx.doi.org/10.1080/15476286.2015.1031951DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615770PMC
February 2016

Identification and Functional Analysis of the Pre-piRNA 3' Trimmer in Silkworms.

Cell 2016 Feb;164(5):962-73

Institute of Molecular and Cellular Biosciences, The University of Tokyo, Bunkyo-ku, Tokyo 113-0032, Japan; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Bunkyo-ku, Tokyo 113-0032, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.cell.2016.01.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4856147PMC
February 2016

Mitochondrial tRNA-lookalikes in nuclear chromosomes: could they be functional?

RNA Biol 2015 ;12(4):375-80

a Computational Medicine Center; Sidney Kimmel Medical College at Thomas Jefferson University ; Philadelphia , PA USA.

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http://dx.doi.org/10.1080/15476286.2015.1017239DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4615777PMC
January 2016

Dissecting tRNA-derived fragment complexities using personalized transcriptomes reveals novel fragment classes and unexpected dependencies.

Oncotarget 2015 Sep;6(28):24797-822

Computational Medicine Center, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA, USA.

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http://dx.doi.org/10.18632/oncotarget.4695DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4694795PMC
September 2015

tRNA-Derived Short Non-coding RNA as Interacting Partners of Argonaute Proteins.

Gene Regul Syst Bio 2015 10;9:27-33. Epub 2015 Sep 10.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA, USA.

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http://dx.doi.org/10.4137/GRSB.S29411DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4567038PMC
September 2015

Dumbbell-PCR: a method to quantify specific small RNA variants with a single nucleotide resolution at terminal sequences.

Nucleic Acids Res 2015 Jul 16;43(12):e77. Epub 2015 Mar 16.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, 1020 Locust Street, Philadelphia, PA 19107, USA

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http://dx.doi.org/10.1093/nar/gkv218DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4499115PMC
July 2015

Genetic architectures of seropositive and seronegative rheumatic diseases.

Nat Rev Rheumatol 2015 Jul 28;11(7):401-14. Epub 2015 Apr 28.

National Institutes of Health, National Human Genome Research Institute, Inflammatory Disease Section, 10 Center Drive, MSC 1849, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1038/nrrheum.2015.41DOI Listing
July 2015

Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers.

Proc Natl Acad Sci U S A 2015 Jul 29;112(29):E3816-25. Epub 2015 Jun 29.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107;

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http://dx.doi.org/10.1073/pnas.1510077112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4517238PMC
July 2015

A novel 8-joint ultrasound score is useful in daily practice for rheumatoid arthritis.

Mod Rheumatol 2015 May 17;25(3):379-85. Epub 2014 Nov 17.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine , Yokohama , Japan.

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http://www.tandfonline.com/doi/full/10.3109/14397595.2014.97
Publisher Site
http://dx.doi.org/10.3109/14397595.2014.974305DOI Listing
May 2015

Nuclear and mitochondrial tRNA-lookalikes in the human genome.

Front Genet 2014 8;5:344. Epub 2014 Oct 8.

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University Philadelphia, PA, USA.

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http://dx.doi.org/10.3389/fgene.2014.00344DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4189335PMC
October 2014

Ultrasonography predicts achievement of Boolean remission after DAS28-based clinical remission of rheumatoid arthritis.

Mod Rheumatol 2014 Jul 2;24(4):590-8. Epub 2013 Dec 2.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine , Yokohama , Japan.

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http://dx.doi.org/10.3109/14397595.2013.857800DOI Listing
July 2014

Analysis of sDMA modifications of PIWI proteins.

Methods Mol Biol 2014 ;1093:137-48

Department of Biomedical Sciences, Cedars-Sinai Medical Center, Samuel Oschin Comprehensive Cancer Institute, Los Angeles, CA, USA.

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http://dx.doi.org/10.1007/978-1-62703-694-8_11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4376280PMC
June 2014

Behçet disease-associated MHC class I residues implicate antigen binding and regulation of cell-mediated cytotoxicity.

Proc Natl Acad Sci U S A 2014 Jun 12;111(24):8867-72. Epub 2014 May 12.

Inflammatory Disease Section, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892;

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http://dx.doi.org/10.1073/pnas.1406575111DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4066484PMC
June 2014

PIWI Expression and Function in Cancer.

Front Genet 2012 16;3:204. Epub 2012 Oct 16.

Department of Biomedical Sciences, Samuel Oschin Comprehensive Cancer Institute, Cedars-Sinai Medical Center Los Angeles, CA, USA.

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http://journal.frontiersin.org/article/10.3389/fgene.2012.00
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http://dx.doi.org/10.3389/fgene.2012.00204DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3472457PMC
October 2012

Mili and Miwi target RNA repertoire reveals piRNA biogenesis and function of Miwi in spermiogenesis.

Nat Struct Mol Biol 2012 Aug 29;19(8):773-81. Epub 2012 Jul 29.

Department of Pathology and Laboratory Medicine, Division of Neuropathology, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.

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http://dx.doi.org/10.1038/nsmb.2347DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3414646PMC
August 2012

Immunoprecipitation of piRNPs and directional, next generation sequencing of piRNAs.

Methods Mol Biol 2011 ;725:281-93

Division of Neuropathology, Department of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine, Philadelphia, PA, USA.

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http://dx.doi.org/10.1007/978-1-61779-046-1_18DOI Listing
August 2011

[Role of arginine methylation in the Piwi-interacting RNA pathway].

Authors:
Yohei Kirino

Seikagaku 2011 Apr;83(4):312-6

Department of Biomedical Sciences, Cedars-Sinai Medical Center, 5017 Davis Research Building, 8700 Beverly Blvd., Los Angeles, CA 90048, USA.

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April 2011

Reversible infantile respiratory chain deficiency: a clinical and molecular study.

Ann Neurol 2010 Dec;68(6):845-54

Department of Mental Retardation and Birth Defect Research, National Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo, Japan.

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http://dx.doi.org/10.1002/ana.22111DOI Listing
December 2010

Elective affinities: a Tudor-Aubergine tale of germline partnership.

Genes Dev 2010 Sep;24(18):1963-6

Department of Pathology and Laboratory Medicine, Division of Neuropathology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1101/gad.1977010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2939360PMC
September 2010

Neurological manifestations of Behçet's disease in Japan: a study of 54 patients.

J Neurol 2010 Jun 3;257(6):1012-20. Epub 2010 Feb 3.

Center for Rheumatic Diseases, Yokohama City University Medical Center, Yokohama, Japan.

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http://dx.doi.org/10.1007/s00415-010-5454-2DOI Listing
June 2010

Therapeutic angiogenesis in patients with systemic sclerosis by autologous transplantation of bone-marrow-derived cells.

Mod Rheumatol 2010 Jun 19;20(3):263-72. Epub 2010 Feb 19.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, Kanagawa 236-0004, Japan.

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http://dx.doi.org/10.1007/s10165-010-0274-xDOI Listing
June 2010

Expression of heme oxygenase-1 in human leukemic cells and its regulation by transcriptional repressor Bach1.

Cancer Sci 2010 Jun 2;101(6):1409-16. Epub 2010 Mar 2.

Department of Internal Medicine, Yokohama City University Graduate School of Medicine, Yokohama, Japan.

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http://dx.doi.org/10.1111/j.1349-7006.2010.01550.xDOI Listing
June 2010

Arginine methylation of vasa protein is conserved across phyla.

J Biol Chem 2010 Mar 15;285(11):8148-54. Epub 2010 Jan 15.

Department of Pathology and Laboratory Medicine, Division of Neuropathology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1074/jbc.M109.089821DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2832966PMC
March 2010

Serum HO-1 is useful to make differential diagnosis of secondary hemophagocytic syndrome from other similar hematological conditions.

Int J Hematol 2010 Mar 22;91(2):229-37. Epub 2010 Jan 22.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, Kanagawa 236-0004, Japan.

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http://dx.doi.org/10.1007/s12185-010-0495-yDOI Listing
March 2010

Multiple extra-articular synovial cysts complicated with rheumatoid arthritis.

Mod Rheumatol 2009 13;19(5):563-6. Epub 2009 Jun 13.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, Kanagawa, 236-0004, Japan.

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http://dx.doi.org/10.1007/s10165-009-0188-7DOI Listing
January 2010

Arginine methylation of Aubergine mediates Tudor binding and germ plasm localization.

RNA 2010 Jan 19;16(1):70-8. Epub 2009 Nov 19.

Division of Neuropathology, Department of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine,Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1261/rna.1869710DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2802038PMC
January 2010

Arginine methylation of Piwi proteins catalysed by dPRMT5 is required for Ago3 and Aub stability.

Nat Cell Biol 2009 May 19;11(5):652-8. Epub 2009 Apr 19.

Department of Pathology and Laboratory Medicine, Division of Neuropathology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/ncb1872DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746449PMC
May 2009

Screening of tuberculosis by interferon-gamma assay before biologic therapy for rheumatoid arthritis.

Tuberculosis (Edinb) 2009 Mar 10;89(2):136-41. Epub 2009 Feb 10.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Kanagawa, Japan.

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http://dx.doi.org/10.1016/j.tube.2008.12.004DOI Listing
March 2009

Circulating carbon monoxide level is elevated after sleep in patients with obstructive sleep apnea.

Chest 2008 Nov;134(5):904-910

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Japan. Electronic address:

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http://dx.doi.org/10.1378/chest.07-2904DOI Listing
November 2008

Site-specific crosslinking of human microRNPs to RNA targets.

RNA 2008 Oct 21;14(10):2254-9. Epub 2008 Aug 21.

Division of Neuropathology, Department of Pathology and Laboratory Medicine, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://www.rnajournal.org/cgi/doi/10.1261/rna.1133808
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http://dx.doi.org/10.1261/rna.1133808DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2553735PMC
October 2008

Heme oxygenase 1 attenuates the development of atopic dermatitis-like lesions in mice: implications for human disease.

J Allergy Clin Immunol 2008 Aug 25;122(2):290-7, 297.e1-8. Epub 2008 Jun 25.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Japan.

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http://dx.doi.org/10.1016/j.jaci.2008.05.031DOI Listing
August 2008

Association of reduced heme oxygenase-1 with excessive Toll-like receptor 4 expression in peripheral blood mononuclear cells in Behçet's disease.

Arthritis Res Ther 2008 31;10(1):R16. Epub 2008 Jan 31.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, 236-0004, 3-9 Fukuura, Kanazawa-ku, Yokohama, Japan.

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http://dx.doi.org/10.1186/ar2367DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374472PMC
July 2008

Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding.

J Biol Chem 2008 Jul 2;283(27):18801-11. Epub 2008 May 2.

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

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http://dx.doi.org/10.1074/jbc.M800233200DOI Listing
July 2008

2'-O-methyl modification in mouse piRNAs and its methylase.

Nucleic Acids Symp Ser (Oxf) 2007 (51):417-8

Department of Pathology and Laboratory Medicine, Division of Neuropathology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1093/nass/nrm209DOI Listing
April 2008

Mouse Piwi-interacting RNAs are 2'-O-methylated at their 3' termini.

Nat Struct Mol Biol 2007 Apr 25;14(4):347-8. Epub 2007 Mar 25.

Department of Pathology and Laboratory Medicine, Division of Neuropathology, University of Pennsylvania School of Medicine, Philadelphia, Pennsylvania 19104, USA.

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http://dx.doi.org/10.1038/nsmb1218DOI Listing
April 2007

Systemic sclerosis and pseudomesotheliomatous adenocarcinoma of the lung.

Mod Rheumatol 2006 ;16(3):165-8

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.

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http://dx.doi.org/10.1007/s10165-006-0472-8DOI Listing
October 2006

Biosynthesis of wybutosine, a hyper-modified nucleoside in eukaryotic phenylalanine tRNA.

EMBO J 2006 May 27;25(10):2142-54. Epub 2006 Apr 27.

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Bunkyo-ku, Tokyo, Japan.

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http://dx.doi.org/10.1038/sj.emboj.7601105DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1462984PMC
May 2006

Regulatory role of heme oxygenase 1 in inflammation of rheumatoid arthritis.

Arthritis Rheum 2006 Apr;54(4):1132-42

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Japan.

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http://dx.doi.org/10.1002/art.21754DOI Listing
April 2006

Acquisition of the wobble modification in mitochondrial tRNALeu(CUN) bearing the G12300A mutation suppresses the MELAS molecular defect.

Hum Mol Genet 2006 Mar 30;15(6):897-904. Epub 2006 Jan 30.

Department of Chemistry and Biotechnology, Graduate School of Engineering, Graduate School of Frontier Sciences, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

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http://dx.doi.org/10.1093/hmg/ddl007DOI Listing
March 2006

Increased serum HO-1 in hemophagocytic syndrome and adult-onset Still's disease: use in the differential diagnosis of hyperferritinemia.

Arthritis Res Ther 2005 21;7(3):R616-24. Epub 2005 Mar 21.

Department of Internal Medicine and Clinical Immunology, Yokohama City University Graduate School of Medicine, Yokohama, Japan.

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http://dx.doi.org/10.1186/ar1721DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1174958PMC
January 2006

Specific correlation between the wobble modification deficiency in mutant tRNAs and the clinical features of a human mitochondrial disease.

Proc Natl Acad Sci U S A 2005 May 3;102(20):7127-32. Epub 2005 May 3.

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0500563102
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http://dx.doi.org/10.1073/pnas.0500563102DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1129107PMC
May 2005

Wobble modification deficiency in mutant tRNAs in patients with mitochondrial diseases.

FEBS Lett 2005 May;579(13):2948-52

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, Japan.

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http://dx.doi.org/10.1016/j.febslet.2005.04.038DOI Listing
May 2005

Human mitochondrial diseases associated with tRNA wobble modification deficiency.

RNA Biol 2005 Apr 14;2(2):41-4. Epub 2005 Apr 14.

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8565, Japan.

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http://dx.doi.org/10.4161/rna.2.2.1610DOI Listing
April 2005

[Liver involvement in primary Sjogren's syndrome].

Nihon Rinsho Meneki Gakkai Kaishi 2004 Dec;27(6):397-401

National Hospital Organization Yokohama Medical Center.

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December 2004

Codon-specific translational defect caused by a wobble modification deficiency in mutant tRNA from a human mitochondrial disease.

Proc Natl Acad Sci U S A 2004 Oct 11;101(42):15070-5. Epub 2004 Oct 11.

Department of Chemistry and Biotechnology, Graduate School of Engineering, University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0405173101
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http://dx.doi.org/10.1073/pnas.0405173101DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC524061PMC
October 2004

Decoding property of C5 uridine modification at the wobble position of tRNA anticodon.

Nucleic Acids Res Suppl 2003 (3):245-6

Department of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Bldg. FSB-301, 5-1-5 Kashiwanoha, Kashiwa, Chiba Prefecture, 277-8562, Japan.

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October 2003

[A solitary lung lesion in Wegener's granulomatosis, which was difficult to differentiate from lung neoplasm].

Ryumachi 2003 Feb;43(1):39-43

First Department of Internal Medicine, Yokohama City University School of Medicine, Fukuura, Kanazawa-ku, Yokohama-city.

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February 2003