Professor Yi-Ping Phoebe Chen, PhD - La Trobe University - Professor

Professor Yi-Ping Phoebe Chen

PhD

La Trobe University

Professor

Melbourne, VIC | Australia

Main Specialties: Biology

Additional Specialties: Bioinformatics, Multimedia, Knowledge Discovery

Professor Yi-Ping Phoebe Chen, PhD - La Trobe University - Professor

Professor Yi-Ping Phoebe Chen

PhD

Introduction

Professor Yi-Ping Phoebe Chen is Professor of Computer Science at the Department of Computer Science and Information Technology, La Trobe University, Melbourne Australia. She was Head of Department of Department of Computer Science and Computer Engineering, La Trobe University from Sep 2010 to April 2012. Prof Chen is the Chief Investigator of ARC Centre of Excellence in Bioinformatics. Phoebe received her BInfTech degree with First Class Honours and PhD in Computer Science (Bioinformatics) from the University of Queensland.

Primary Affiliation: La Trobe University - Melbourne, VIC , Australia

Specialties:

Additional Specialties:

Research Interests:

Publications

88Publications

1595Reads

1Profile Views

Research on folding diversity in statistical learning methods for RNA secondary structure prediction.

Int J Biol Sci 2018 22;14(8):872-882. Epub 2018 May 22.

Department of Computer Science and Information Technology, La Trobe University, Australia.

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http://dx.doi.org/10.7150/ijbs.24595DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6036747PMC
July 2019
9 Reads
4.510 Impact Factor

A database of simulated tumor genomes towards accurate detection of somatic small variants in cancer.

PLoS One 2018 30;13(8):e0202982. Epub 2018 Aug 30.

College of Science, Health and Engineering, La Trobe University, Melbourne, Victoria, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0202982PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6116990PMC
February 2019
7 Reads
3.234 Impact Factor

Large-scale frequent stem pattern mining in RNA families.

J Theor Biol 2018 10 20;455:131-139. Epub 2018 Jul 20.

Department of Computer Science and Information, Technology, La Trobe University, Melbourne VIC 3086, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.jtbi.2018.07.015DOI Listing
October 2018
2.120 Impact Factor

Variance explained by whole genome sequence variants in coding and regulatory genome annotations for six dairy traits.

BMC Genomics 2018 Apr 5;19(1):237. Epub 2018 Apr 5.

Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, The University of Queensland, Building 80, 306 Carmody Road, Brisbane, St Lucia, QLD, 4072, Australia.

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http://dx.doi.org/10.1186/s12864-018-4617-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5885354PMC
April 2018
7 Reads
3.990 Impact Factor

Optimized Structure of the Traffic Flow Forecasting Model With a Deep Learning Approach.

IEEE Trans Neural Netw Learn Syst 2017 10 20;28(10):2371-2381. Epub 2016 Jul 20.

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http://dx.doi.org/10.1109/TNNLS.2016.2574840DOI Listing
October 2017
9 Reads
4.370 Impact Factor

Atmospheric deposition exposes Qinling pandas to toxic pollutants.

Ecol Appl 2017 03 2;27(2):343-348. Epub 2017 Mar 2.

Harvard Forest, Harvard University, 324 North Main Street, Petersham, Massachusetts, 01366, USA.

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http://dx.doi.org/10.1002/eap.1494DOI Listing
March 2017
35 Reads
4.093 Impact Factor

A comprehensive study of RNA secondary structure alignment algorithms.

Brief Bioinform 2017 03;18(2):291-305

Department of Computer Science and Information Technology, La Trobe University, Melbourne, Victoria, Australia.

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http://dx.doi.org/10.1093/bib/bbw009DOI Listing
March 2017
15 Reads
9.620 Impact Factor

Highway increases concentrations of toxic metals in giant panda habitat.

Environ Sci Pollut Res Int 2016 Nov 6;23(21):21262-21272. Epub 2016 Aug 6.

Shaanxi Rare Wildlife Conservation and Breeding Center, Zhouzhi, Xi'an, 710402, China.

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http://dx.doi.org/10.1007/s11356-016-7221-0DOI Listing
November 2016
21 Reads
2.830 Impact Factor

A hybrid expectation maximisation and MCMC sampling algorithm to implement Bayesian mixture model based genomic prediction and QTL mapping.

BMC Genomics 2016 Sep 21;17(1):744. Epub 2016 Sep 21.

Biosciences Research, Department of Economic Development, Jobs, Transport and Resources, Bundoora, Melbourne, VIC, Australia.

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http://dx.doi.org/10.1186/s12864-016-3082-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031345PMC
September 2016
34 Reads
3.990 Impact Factor

Guest Editorial for the 13th Asia Pacific Bioinformatics Conference.

IEEE/ACM Trans Comput Biol Bioinform 2015 Nov-Dec;12(6):1217-8

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http://dx.doi.org/10.1109/tcbb.2015.2451231DOI Listing
September 2016
4 Reads
1.440 Impact Factor

Guest Editorial for the 14th Asia Pacific Bioinformatics Conference (APBC2016).

Comput Biol Chem 2016 08 13;63:1-2. Epub 2016 Apr 13.

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http://dx.doi.org/10.1016/j.compbiolchem.2016.03.007DOI Listing
August 2016
2 Reads
1.120 Impact Factor

A catalogue of novel bovine long noncoding RNA across 18 tissues.

PLoS One 2015 23;10(10):e0141225. Epub 2015 Oct 23.

College of Science, Health and Engineering, La Trobe University Bundoora, Melbourne, Victoria, Australia; Department of Environment and Primary Industries, AgriBio Bundoora, Melbourne, Victoria, Australia; Dairy Futures Co-operative Research Centre, Melbourne, Victoria, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0141225PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4619662PMC
June 2016
24 Reads
3.234 Impact Factor

Guest Editorial for the 12th Asia Pacific Bioinformatics Conference.

IEEE/ACM Trans Comput Biol Bioinform 2014 Jul-Aug;11(4):614-5

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http://dx.doi.org/10.1109/tcbb.2014.2327487DOI Listing
March 2016
8 Reads
1.440 Impact Factor

Changes in snoRNA and snRNA Abundance in the Human, Chimpanzee, Macaque, and Mouse Brain.

Genome Biol Evol 2016 Mar 23;8(3):840-50. Epub 2016 Mar 23.

CAS Key Laboratory of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai, China Skolkovo Institute for Science and Technology, Skolkovo, Russia Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany School of Life Science and Technology, ShanghaiTech University, Shanghai, China

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http://dx.doi.org/10.1093/gbe/evw038DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4824147PMC
March 2016
10 Reads
4.230 Impact Factor

Pairwise RNA secondary structure alignment with conserved stem pattern.

Bioinformatics 2015 Dec 13;31(24):3914-21. Epub 2015 Aug 13.

Department of Computer Science and Information Technology, La Trobe University, Melbourne, Victoria 3086, Australia.

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http://dx.doi.org/10.1093/bioinformatics/btv471DOI Listing
December 2015
4 Reads
4.981 Impact Factor

Potential therapeutic targets and the role of technology in developing novel antileishmanial drugs.

Drug Discov Today 2015 Aug 29;20(8):958-68. Epub 2015 Apr 29.

College of Science, Health and Engineering, La Trobe University, Melbourne, VIC, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.drudis.2015.04.006DOI Listing
August 2015
11 Reads
6.691 Impact Factor

Editorial.

Comput Biol Chem 2015 Aug 3;57:1-2. Epub 2015 Mar 3.

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http://dx.doi.org/10.1016/j.compbiolchem.2015.02.017DOI Listing
August 2015
7 Reads
1.120 Impact Factor

Efficient conversion of RNA pseudoknots to knot-free structures using a graphical model.

IEEE Trans Biomed Eng 2015 May 2;62(5):1265-71. Epub 2014 Dec 2.

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http://dx.doi.org/10.1109/TBME.2014.2375360DOI Listing
May 2015
7 Reads
2.350 Impact Factor

A computationally efficient algorithm for genomic prediction using a Bayesian model.

Genet Sel Evol 2015 Apr 30;47:34. Epub 2015 Apr 30.

Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, VIC, 3086, Australia.

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http://dx.doi.org/10.1186/s12711-014-0082-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4415253PMC
April 2015
30 Reads
3.821 Impact Factor

Bioinformatics in protein kinases regulatory network and drug discovery.

Math Biosci 2015 Apr 2;262:147-56. Epub 2015 Feb 2.

Department of Computer Science and Computer Engineering, La Trobe University, Vic 3086, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.mbs.2015.01.010DOI Listing
April 2015
12 Reads
1.303 Impact Factor

Determining common insertion sites based on retroviral insertion distribution across tumors.

Comput Biol Chem 2014 Aug 12;51:83-92. Epub 2014 Mar 12.

Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Victoria 3086, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.compbiolchem.2014.03.001DOI Listing
August 2014
8 Reads
1.120 Impact Factor

Advances in bioinformatics: selected papers from APBC 2014.

Comput Biol Chem 2014 Jun;50:1-2

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http://dx.doi.org/10.1016/j.compbiolchem.2014.05.001DOI Listing
June 2014
20 Reads
1.120 Impact Factor

Regulatory and coding genome regions are enriched for trait associated variants in dairy and beef cattle.

BMC Genomics 2014 Jun 6;15:436. Epub 2014 Jun 6.

Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Victoria 3086, Australia.

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http://dx.doi.org/10.1186/1471-2164-15-436DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4070550PMC
June 2014
27 Reads
3.990 Impact Factor

Subdividing globally important zones based on data distribution across multiple genome fragments.

Comput Biol Med 2014 May 28;48:109-18. Epub 2014 Feb 28.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.compbiomed.2014.02.004DOI Listing
May 2014
2 Reads
1.240 Impact Factor

Elevation of human leukocyte antigen-G expression is associated with the severe encephalitis associated with neurogenic pulmonary edema caused by Enterovirus 71.

Clin Exp Med 2014 May 21;14(2):161-7. Epub 2013 Apr 21.

Department of the Laboratory Medicine, the Second Hospital, Wenzhou Medical College, Wenzhou, Zhejiang, China.

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http://dx.doi.org/10.1007/s10238-013-0237-6DOI Listing
May 2014
8 Reads
2.824 Impact Factor

Modelling and enhanced molecular dynamics to steer structure-based drug discovery.

Prog Biophys Mol Biol 2014 May 1;114(3):123-36. Epub 2013 Jul 1.

Department of Computer Science and Computer Engineering, Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, VIC 3086, Australia. Electronic address:

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http://dx.doi.org/10.1016/j.pbiomolbio.2013.06.004DOI Listing
May 2014
10 Reads
2.274 Impact Factor

National survey of doctor-reported secondary preventive treatment for patients with acute coronary syndrome in China.

Chin Med J (Engl) 2013 ;126(18):3451-5

State Key Laboratory of Cardiovascular Disease, China Oxford Centre for International Health Research, Fuwai Hospital, National Center for Cardiovascular Diseases, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100037, China.

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April 2014
19 Reads
1.020 Impact Factor

Responses of soil microbial activity to cadmium pollution and elevated CO2.

Sci Rep 2014 Mar 6;4:4287. Epub 2014 Mar 6.

Elizabeth Macarthur Agricultural Institute, Department of Primary Industries, Menangle, NSW 2568, Australia.

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http://dx.doi.org/10.1038/srep04287DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3944317PMC
March 2014
4 Reads
5.080 Impact Factor

Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways.

PLoS Biol 2014 Mar 4;12(3):e1001803. Epub 2014 Mar 4.

Institute of Molecular Biology, Academia Sinica, Taipei, Taiwan, Republic of China; Graduate Institute of Biochemistry and Molecular Biology, National Taiwan University, Taipei, Taiwan, Republic of China.

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http://dx.doi.org/10.1371/journal.pbio.1001803DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942315PMC
March 2014
6 Reads

Guest editorial: Advanced algorithms of bioinformatics.

IEEE/ACM Trans Comput Biol Bioinform 2013 Mar-Apr;10(2):273-

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http://dx.doi.org/10.1109/tcbb.2013.93DOI Listing
February 2014
5 Reads
1.440 Impact Factor

Shared care combined with telecare improves glycemic control of diabetic patients in a rural underserved community.

Telemed J E Health 2014 Feb 9;20(2):175-8. Epub 2013 Dec 9.

1 Division of Endocrinology and Metabolism, Department of Internal Medicine, Changhua Christian Hospital , Changhua, Taiwan .

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http://dx.doi.org/10.1089/tmj.2013.0037DOI Listing
February 2014
19 Reads
1.544 Impact Factor

A steered molecular dynamics mediated hit discovery for histone deacetylases.

Phys Chem Chem Phys 2014 Feb;16(8):3777-91

Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Victoria 3086, Australia.

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http://dx.doi.org/10.1039/c3cp53511hDOI Listing
February 2014
5 Reads
4.493 Impact Factor

Computational developments in microRNA-regulated protein-protein interactions.

BMC Syst Biol 2014 Feb 10;8:14. Epub 2014 Feb 10.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1186/1752-0509-8-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3922185PMC
February 2014
88 Reads
2.440 Impact Factor

k-Partite cliques of protein interactions: A novel subgraph topology for functional coherence analysis on PPI networks.

J Theor Biol 2014 Jan 19;340:146-54. Epub 2013 Sep 19.

Advanced Analytics Institute, University of Technology Sydney, Sydney, Australia.

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http://dx.doi.org/10.1016/j.jtbi.2013.09.013DOI Listing
January 2014
30 Reads
2.120 Impact Factor

[Glutaric aciduria type I: a report of 2 cases].

Authors:
Qi Liu Yi-Ping Chen

Zhongguo Dang Dai Er Ke Za Zhi 2014 Jan;16(1):87-90

Yuying Children's Hospital, Wenzhou Medical University, Wenzhou, Zhejiang 325000, China.

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January 2014
16 Reads

Simultaneous determination of ten steroid hormones in animal origin food by matrix solid-phase dispersion and liquid chromatography-electrospray tandem mass spectrometry.

Food Chem 2014 Jan 3;142:170-7. Epub 2013 Jul 3.

Analytical & Testing Center of Beijing Normal University, Beijing 100875, China.

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http://dx.doi.org/10.1016/j.foodchem.2013.06.104DOI Listing
January 2014
11 Reads
3.391 Impact Factor

Enhanced non-endocytotic uptake of mesoporous silica nanoparticles by shortening the peptide transporter arginine side chain.

ACS Appl Mater Interfaces 2013 Dec 21;5(23):12244-8. Epub 2013 Nov 21.

Department of Chemistry, National Taiwan University , Taipei 10617, Taiwan.

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http://dx.doi.org/10.1021/am4039882DOI Listing
December 2013
2 Reads
6.723 Impact Factor

[Study on the relationship between structure and spectroscopy of two compounds containing 2,2'-bipy and [MoO3] cluster skeletons].

Guang Pu Xue Yu Guang Pu Fen Xi 2013 Nov;33(11):2953-8

Department of Chemistry, Fuzhou University, Fuzhou 350108, China.

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November 2013
8 Reads
0.270 Impact Factor

Ligand release mechanisms and channels in histone deacetylases.

J Comput Chem 2013 Oct 27;34(26):2270-83. Epub 2013 Jul 27.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Australia; CSIRO Ecosystem Sciences, Canberra, Australia.

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http://dx.doi.org/10.1002/jcc.23390DOI Listing
October 2013
11 Reads
3.590 Impact Factor

Syntheses and evaluation of novel isoliquiritigenin derivatives as potential dual inhibitors for amyloid-beta aggregation and 5-lipoxygenase.

Eur J Med Chem 2013 Aug 21;66:22-31. Epub 2013 May 21.

School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510006, People's Republic of China.

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http://dx.doi.org/10.1016/j.ejmech.2013.05.015DOI Listing
August 2013
7 Reads
3.450 Impact Factor

A green luminescent 1-D helical tubular dipyrazol-bridged cadmium(II) complex: a coordination tube included in a supramolecular tube.

Dalton Trans 2013 Aug;42(29):10503-9

Department of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China.

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http://dx.doi.org/10.1039/c3dt50620gDOI Listing
August 2013
4 Reads
4.200 Impact Factor

Identification of well-differentiated gene expressions between Han Chinese and Japanese using genome-wide microarray data analysis.

J Med Genet 2013 Aug 4;50(8):534-42. Epub 2013 Jun 4.

Max Planck Independent Research Group on Population Genomics, Chinese Academy of Sciences and Max Planck Society (CAS-MPG) Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.

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http://dx.doi.org/10.1136/jmedgenet-2012-101501DOI Listing
August 2013
37 Reads
6.340 Impact Factor

Quantum polarized ligand docking investigation to understand the significance of protonation states in histone deacetylase inhibitors.

J Mol Graph Model 2013 Jul 14;44:44-53. Epub 2013 May 14.

Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1016/j.jmgm.2013.05.002DOI Listing
July 2013
48 Reads
1.722 Impact Factor

Ultrasonic vibration seeds showed improved resistance to cadmium and lead in wheat seedling.

Environ Sci Pollut Res Int 2013 Jul 8;20(7):4807-16. Epub 2013 Jan 8.

SKLLQG, Institute of Earth Environment, Chinese Academy of Science, No. 10, Feng-Hui Road, Xi'an 710075, China.

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http://dx.doi.org/10.1007/s11356-012-1411-1DOI Listing
July 2013
24 Reads
2.830 Impact Factor

Prediction of pre-miRNA with multiple stem-loops using pruning algorithm.

Comput Biol Med 2013 Jun 15;43(5):409-16. Epub 2013 Mar 15.

Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing 210016, China.

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http://dx.doi.org/10.1016/j.compbiomed.2013.02.003DOI Listing
June 2013
6 Reads
1.240 Impact Factor

Semantically predicting protein functions based on protein functional connectivity.

Comput Biol Chem 2013 Jun 29;44:9-14. Epub 2013 Jan 29.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1016/j.compbiolchem.2013.01.002DOI Listing
June 2013
5 Reads
1.120 Impact Factor

An immunosensor based on magnetic relaxation switch and polystyrene microparticle-induced immune multivalency enrichment system for the detection of Pantoea stewartii subsp. Stewartii.

Biosens Bioelectron 2013 May 3;43:6-11. Epub 2012 Dec 3.

Analytical & Testing Center of Beijing Normal University, Beijing 100875, PR China.

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http://dx.doi.org/10.1016/j.bios.2012.11.022DOI Listing
May 2013
26 Reads
6.410 Impact Factor

Two novel 2D lanthanide-cadmium heterometal-organic frameworks based on nanosized heart-like Ln6Cd6O12 wheel-clusters exhibiting luminescence sensing to the polarization and concentration of cations.

Dalton Trans 2013 May;42(18):6314-7

Department of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China.

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http://dx.doi.org/10.1039/c3dt50368bDOI Listing
May 2013
6 Reads
4.200 Impact Factor

GI-POP: a combinational annotation and genomic island prediction pipeline for ongoing microbial genome projects.

Gene 2013 Apr 12;518(1):114-23. Epub 2013 Jan 12.

Institute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, Taiwan.

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https://ir.nctu.edu.tw/bitstream/11536/21325/1/0003164241000
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http://linkinghub.elsevier.com/retrieve/pii/S037811191201484
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http://dx.doi.org/10.1016/j.gene.2012.11.063DOI Listing
April 2013
31 Reads
2.140 Impact Factor

Conformational features of topologically classified RNA secondary structures.

PLoS One 2012 5;7(7):e39907. Epub 2012 Jul 5.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Victoria, Australia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0039907PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3390330PMC
March 2013
4 Reads
3.234 Impact Factor

Altering the Tat-derived peptide bioactivity landscape by changing the arginine side chain length.

Amino Acids 2013 Feb 21;44(2):473-80. Epub 2012 Jul 21.

Department of Chemistry, National Taiwan University, Taipei 10617, Taiwan.

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http://dx.doi.org/10.1007/s00726-012-1357-0DOI Listing
February 2013
19 Reads
3.293 Impact Factor

Energy based pharmacophore mapping of HDAC inhibitors against class I HDAC enzymes.

Biochim Biophys Acta 2013 Jan;1834(1):317-28

Department of Computer Science and Computer Engineering, Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1016/j.bbapap.2012.08.009DOI Listing
January 2013
5 Reads

[ACEI/ARB use among high risk patients with coronary heart disease in China: a cross-sectional study].

Zhonghua Xin Xue Guan Bing Za Zhi 2013 Jan;41(1):18-22

China Oxford Centre for International Health Research Cardiovascular Institute, Beijing, People's Republic of China.

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January 2013
10 Reads

[Chemical extraction of arsenic co-precipitated with amorphous Fe (OH)3 and Fe3O4].

Huan Jing Ke Xue 2013 Jan;34(1):308-14

Key Laboratory of Pollution Ecology and Environmental Engineering, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China.

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January 2013
3 Reads

Guest Editorial: Application and development of bioinformatics.

IEEE/ACM Trans Comput Biol Bioinform 2012 Sep-Oct;9(5):1265

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http://dx.doi.org/10.1109/tcbb.2012.96DOI Listing
January 2013
2 Reads
1.440 Impact Factor

A new strategy for intracellular delivery of enzyme using mesoporous silica nanoparticles: superoxide dismutase.

J Am Chem Soc 2013 Jan 16;135(4):1516-23. Epub 2013 Jan 16.

Department of Chemistry, National Taiwan University, Taipei 106, Taiwan.

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http://dx.doi.org/10.1021/ja3105208DOI Listing
January 2013
27 Reads
12.113 Impact Factor

Immunosensor based on magnetic relaxation switch and biotin-streptavidin system for the detection of Kanamycin in milk.

Biosens Bioelectron 2013 Jan 11;39(1):112-7. Epub 2012 Jul 11.

Chinese Academy of Inspection and Quarantine, Beijing 100123, China.

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http://dx.doi.org/10.1016/j.bios.2012.06.056DOI Listing
January 2013
20 Reads
6.410 Impact Factor

Computational methods for protein interaction and structural prediction.

Biochim Biophys Acta 2012 Dec;1824(12):1416-7

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http://dx.doi.org/10.1016/j.bbapap.2012.09.011DOI Listing
December 2012
4 Reads

Quantum dots capped with dummy molecularly imprinted film as luminescent sensor for the determination of tetrabromobisphenol A in water and soils.

J Agric Food Chem 2012 Oct 16;60(42):10472-9. Epub 2012 Oct 16.

Analytical & Testing Center of Beijing Normal University, Beijing 100875, China.

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http://dx.doi.org/10.1021/jf3026138DOI Listing
October 2012
6 Reads
2.912 Impact Factor

Accelerated aging-related transcriptome changes in the female prefrontal cortex.

Aging Cell 2012 Oct 2;11(5):894-901. Epub 2012 Aug 2.

Key Laboratory for Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yue Yang Road, Shanghai 200031, China.

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http://dx.doi.org/10.1111/j.1474-9726.2012.00859.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3470704PMC
October 2012
11 Reads
6.340 Impact Factor

Probing the structure of Leishmania major DHFR TS and structure based virtual screening of peptide library for the identification of anti-leishmanial leads.

J Mol Model 2012 Sep 15;18(9):4089-100. Epub 2012 Apr 15.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Victoria, 3086, Australia.

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http://dx.doi.org/10.1007/s00894-012-1411-6DOI Listing
September 2012
8 Reads

Synthesis, crystal structure of α-Keggin heteropolymolybdates with pyridine-2,6-dicarboxylate based frameworks, and associated RhB photocatalytic degradation and 2D-IR COS tests.

Dalton Trans 2012 Sep 23;41(33):10035-42. Epub 2012 May 23.

Department of Chemistry, Fuzhou University, Fuzhou, Fujian, PR China.

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http://dx.doi.org/10.1039/c2dt00001fDOI Listing
September 2012
5 Reads
4.200 Impact Factor

How an exonuclease decides where to stop in trimming of nucleic acids: crystal structures of RNase T-product complexes.

Nucleic Acids Res 2012 Sep 19;40(16):8144-54. Epub 2012 Jun 19.

Institute of Molecular Biology, Academia Sinica, Taipei, 11529, Taiwan, ROC.

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http://dx.doi.org/10.1093/nar/gks548DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3439924PMC
September 2012
14 Reads
9.112 Impact Factor

Apocynum venetum leaf extract attenuates disruption of the blood-brain barrier and upregulation of matrix metalloproteinase-9/-2 in a rat model of cerebral ischemia-reperfusion injury.

Neurochem Res 2012 Aug 17;37(8):1820-8. Epub 2012 May 17.

Department of Integrative Medicine, Zhongshan Hospital, Fudan University, Shanghai 200032, China.

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http://dx.doi.org/10.1007/s11064-012-0796-zDOI Listing
August 2012
38 Reads
2.593 Impact Factor

[Neurologic complications in children with enterovirus 71-infected hand-foot-mouth disease : clinical features, MRI findings and follow-up study].

Zhonghua Yi Xue Za Zhi 2012 Jul;92(25):1742-6

Department of Radiology, Second Affiliated Hospital, Wenzhou Medical College, Wenzhou 325027, China.

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July 2012
7 Reads

Selective protection of nigral dopaminergic neurons by echinacoside in a rat model of Parkinson disease induced by rotenone.

Zhong Xi Yi Jie He Xue Bao 2012 Jul;10(7):777-83

Department of Integrative Medicine, Fudan University, Shanghai, China.

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http://dx.doi.org/10.3736/jcim20120708DOI Listing
July 2012
52 Reads

[Clinical analysis of 10 cases of childhood acute leukemia complicated by varicella].

Zhongguo Dang Dai Er Ke Za Zhi 2012 Jun;14(6):462-3

Yuying Children's Hospital, Wenzhou Medical College, Wenzhou, Zhejiang 325027, China.

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June 2012
1 Read

The Tenth Asia Pacific Bioinformatics Conference (APBC 2012). Introduction.

BMC Genomics 2012 17;13 Suppl 1:I1. Epub 2012 Jan 17.

La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1186/1471-2164-13-S1-I1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3304854PMC
June 2012
3.990 Impact Factor

Underuse of statins in patients with atherosclerotic ischemic stroke in China.

Chin Med J (Engl) 2012 May;125(10):1703-7

Department of Epidemiology & Biostatistics, School of Public Health, Peking University Health Science Center, Beijing 100191, China.

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May 2012
29 Reads
1.020 Impact Factor

A novel polyoxovanadium borate incorporating an organic amine ligand: synthesis and structure of [V12B16O50(OH)7(en)]7-.

Dalton Trans 2012 May 10;41(19):5774-7. Epub 2012 Apr 10.

College of Chemistry and Chemical Engineering, Department of Chemistry, Fuzhou University, Fuzhou, Fujian 350108, People's Republic of China.

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http://dx.doi.org/10.1039/c2dt00018kDOI Listing
May 2012
2 Reads
4.200 Impact Factor

Exploiting multi-layered information to iteratively predict protein functions.

Math Biosci 2012 Apr 3;236(2):108-16. Epub 2012 Mar 3.

Department of Computer Science and Computer Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1016/j.mbs.2012.02.004DOI Listing
April 2012
5 Reads
1.303 Impact Factor

Metabolic classification of microbial genomes using functional probes.

BMC Genomics 2012 Apr 27;13:157. Epub 2012 Apr 27.

Institute of Bioinformatics and Structural Biology, National Tsing Hua University, Hsinchu, Taiwan.

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http://dx.doi.org/10.1186/1471-2164-13-157DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3355368PMC
April 2012
9 Reads
3.990 Impact Factor

Exploring inhibitor release pathways in histone deacetylases using random acceleration molecular dynamics simulations.

J Chem Inf Model 2012 Feb 7;52(2):589-603. Epub 2012 Feb 7.

Department of Computer Science and Computer Engineering, Faculty of Science, Technology and Engineering, La Trobe University, Melbourne, Australia.

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http://dx.doi.org/10.1021/ci200584fDOI Listing
February 2012
4 Reads
3.740 Impact Factor

Predicting miRNA-mediated gene silencing mode based on miRNA-target duplex features.

Comput Biol Med 2012 Jan 29;42(1):1-7. Epub 2011 Oct 29.

Department of Biomedical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China.

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http://dx.doi.org/10.1016/j.compbiomed.2011.10.001DOI Listing
January 2012
11 Reads
1.240 Impact Factor

[Structural and spectral study of a novel lanthanide 2-hydroxynicotinic acid coordination polymer].

Guang Pu Xue Yu Guang Pu Fen Xi 2012 Jan;32(1):166-70

Department of Chemistry, Fuzhou University, Fuzhou 350108, China.

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January 2012
5 Reads
0.270 Impact Factor

Dummy molecularly imprinted polymers on silica particles for selective solid-phase extraction of tetrabromobisphenol A from water samples.

J Chromatogr A 2012 Jan 8;1220:7-13. Epub 2011 Dec 8.

Analytical & Testing Center of Beijing Normal University, Beijing Key Laboratory, Beijing 100875, China.

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http://dx.doi.org/10.1016/j.chroma.2011.11.065DOI Listing
January 2012
7 Reads
4.170 Impact Factor

Cordyceps cicadae extracts ameliorate renal malfunction in a remnant kidney model.

J Zhejiang Univ Sci B 2011 Dec;12(12):1024-33

Department of Nephrology, Longhua Hospital, Shanghai University of Traditional Chinese Medicine.

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http://dx.doi.org/10.1631/jzus.B1100034DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3232436PMC
December 2011
190 Reads
1.280 Impact Factor

[Clinical observation of Shen No. 9 Recipe with Qingre Moshen Granule on the treatment of idiopathic membranous nephropathy after treated by multiple Western drugs with no efficacy].

Zhongguo Zhong Xi Yi Jie He Za Zhi 2011 Nov;31(11):1496-501

Department of Nephrology, Lianyungang Hospital of Traditional Chinese Medicine, Jiangsu (222004).

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November 2011
3 Reads

[Event-related potentials P₃₀₀ with memory function and psychopathology in first-episode paranoid schizophrenia].

Zhejiang Da Xue Xue Bao Yi Xue Ban 2011 Nov;40(6):647-52

The Second Affiliated Hospital, College of Medicine, Zhejing University, Hangzhou 310009, China.

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November 2011
3 Reads

[The structure and spectral research on Mn2 [V12 B16 O52 (OH)6 ] (en) 2 (H3O)6 (H2O)5 (en = ethylenediamine)].

Guang Pu Xue Yu Guang Pu Fen Xi 2011 Nov;31(11):3026-30

Department of Chemistry, Fuzhou University, Fuzhou 350108, China.

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November 2011
95 Reads
0.270 Impact Factor

Effects of the tip shape on the localized field enhancement and far field radiation pattern of the plasmonic inverted pyramidal nanostructures with the tips for surface-enhanced Raman scattering.

Opt Express 2011 Oct;19(22):22125-41

Department of Engineering Science and Ocean Engineering, National Taiwan University, No. 1, Sec. 4, Roosevelt Road, Taipei 10617, Taiwan.

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http://dx.doi.org/10.1364/OE.19.022125DOI Listing
October 2011
3 Reads
3.490 Impact Factor

Structure-based drug design to augment hit discovery.

Drug Discov Today 2011 Sep 22;16(17-18):831-9. Epub 2011 Jul 22.

Faculty of Science, Technology and Engineering, La Trobe University, Australia.

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http://dx.doi.org/10.1016/j.drudis.2011.07.006DOI Listing
September 2011
74 Reads
6.691 Impact Factor

Development and application of a modified dynamic time warping algorithm (DTW-S) to analyses of primate brain expression time series.

BMC Bioinformatics 2011 Aug 18;12:347. Epub 2011 Aug 18.

Key Laboratory for Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yue Yang Road, Shanghai 200031, China.

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http://dx.doi.org/10.1186/1471-2105-12-347DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3180390PMC
August 2011
105 Reads
2.580 Impact Factor

[Current statin use for patients with atherosclerotic cardiovascular disease in 39 large Chinese hospitals].

Zhonghua Xin Xue Guan Bing Za Zhi 2011 May;39(5):397-401

China Oxford Centre for International Health Research Cardiovascular Institute, Fu Wai Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100037, China.

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May 2011
10 Reads

Genetic variation of the hemagglutinin of avian influenza virus H9N2.

J Med Virol 2011 May;83(5):838-46

Department of Biomedical Engineering, Nanjing University of Aeronautics & Astronautics, Nanjing, China.

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http://dx.doi.org/10.1002/jmv.22021DOI Listing
May 2011
9 Reads
2.350 Impact Factor

Top co-authors

Subha Kalyaanamoorthy
Subha Kalyaanamoorthy

La Trobe University

7
Yan Gao
Yan Gao

University of Mississippi Medical Center

5
Jing Li
Jing Li

National Clinical Research Center of Cardiovascular Diseases

5
Fang Feng
Fang Feng

China Pharmaceutical University

5
Xi Li
Xi Li

National Clinical Research Center of Cardiovascular Diseases

5
Ben J Hayes
Ben J Hayes

Biosciences Research Division

5
Qi Liu
Qi Liu

Shanghai Tenth People's Hospital

4
Song Deng
Song Deng

Tongji Hospital

4