Yasushi Okazaki

Yasushi Okazaki

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Yasushi Okazaki

Publications by authors named "Yasushi Okazaki"

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Different phenotypes of gastric fundic gland polyposis and cancer in patients with familial adenomatous polyposis depending on Helicobacter pylori infection.

Gastric Cancer 2019 Nov 16;22(6):1294-1300. Epub 2019 Sep 16.

Department of Gastroenterology and Oncology, Tokushima University Graduate School of Biomedical Sciences, 3-18-15, Kuramoto-cho, Tokushima city, Tokushima, 770-8503, Japan.

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http://dx.doi.org/10.1007/s10120-019-01005-yDOI Listing
November 2019

Transition from Leigh syndrome to MELAS syndrome in a patient with heteroplasmic MT-ND3 m.10158T>C.

Brain Dev 2019 Oct 6;41(9):803-807. Epub 2019 Jun 6.

Department of Pediatrics and Neonatology, Nagoya City University Graduate School of Medical Sciences, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.braindev.2019.05.006DOI Listing
October 2019

Prevalence of Lynch syndrome among patients with upper urinary tract carcinoma in a Japanese hospital-based population.

Jpn J Clin Oncol 2019 Oct 30. Epub 2019 Oct 30.

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1093/jjco/hyz140DOI Listing
October 2019

A germline MBD4 mutation was identified in a patient with colorectal oligopolyposis and early‑onset cancer: A case report.

Oncol Rep 2019 Sep 17;42(3):1133-1140. Epub 2019 Jul 17.

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Kawagoe, Saitama 350‑8550, Japan.

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http://dx.doi.org/10.3892/or.2019.7239DOI Listing
September 2019

Evolutionary History of GLIS Genes Illuminates their Roles in Cell Reprogramming and Ciliogenesis.

Mol Biol Evol 2019 Sep 5. Epub 2019 Sep 5.

Laboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama JAPAN.

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http://dx.doi.org/10.1093/molbev/msz205DOI Listing
September 2019

Crohn's Disease Presenting as Granulomatous Appendicitis.

Case Rep Gastroenterol 2019 Sep-Dec;13(3):398-402. Epub 2019 Sep 25.

Department of Frontier Surgery, Graduate School of Medicine, Chiba University, Chiba, Japan.

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http://dx.doi.org/10.1159/000503170DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6792421PMC
September 2019

Noninvasive diagnosis of TRIT1-related mitochondrial disorder by measuring i A37 and ms i A37 modifications in tRNAs from blood and urine samples.

Am J Med Genet A 2019 Aug 29;179(8):1609-1614. Epub 2019 May 29.

Department of Molecular Physiology, Faculty of Life Sciences, Kumamoto University, Kumamoto, Japan.

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http://dx.doi.org/10.1002/ajmg.a.61211DOI Listing
August 2019

The single-base-pair deletion, MSH2 c.2635-3delC affecting intron 15 splicing can be a cause of Lynch syndrome.

Jpn J Clin Oncol 2019 May;49(5):477-480

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1093/jjco/hyz031DOI Listing
May 2019

Mitochondrial ribosomal protein PTCD3 mutations cause oxidative phosphorylation defects with Leigh syndrome.

Neurogenetics 2019 03 3;20(1):9-25. Epub 2019 Jan 3.

Diagnostics and Therapeutics of Intractable Diseases, Intractable Disease Research Center, Graduate School of Medicine, Juntendo University, Hongo 2-1-1, Bunkyo-ku, Tokyo, 113-8421, Japan.

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http://link.springer.com/10.1007/s10048-018-0561-9
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http://dx.doi.org/10.1007/s10048-018-0561-9DOI Listing
March 2019

Cardiomyopathy in children with mitochondrial disease: Prognosis and genetic background.

Int J Cardiol 2019 Mar 5;279:115-121. Epub 2019 Jan 5.

Intractable Disease Research Center, Graduate School of Medicine, Juntendo University, Tokyo, Japan; Laboratory for Comprehensive Genomic Analysis, RIKEN Center for Integrative Medical Sciences, Kanagawa, Japan. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01675273183431
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http://dx.doi.org/10.1016/j.ijcard.2019.01.017DOI Listing
March 2019

Reply to the "Letter to the Editor" from Dr. J Finsterer and colleagues.

Neurogenetics 2019 03 21;20(1):55-56. Epub 2019 Feb 21.

Diagnostics and Therapeutics of Intractable Diseases, Intractable Disease Research Center, Graduate School of Medicine, Juntendo University, Hongo 2-1-1, Bunkyo-ku, Tokyo, 113-8421, Japan.

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http://dx.doi.org/10.1007/s10048-019-00567-4DOI Listing
March 2019

Recent topics: the diagnosis, molecular genesis, and treatment of mitochondrial diseases.

J Hum Genet 2019 Feb 21;64(2):113-125. Epub 2018 Nov 21.

Department of Pediatrics, Faculty of Medicine, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1038/s10038-018-0528-6DOI Listing
February 2019

[A Case of Cecal Cancer Associated with Preoperatively Diagnosed Lynch Syndrome Caused by EPCAM Deletion].

Gan To Kagaku Ryoho 2018 Dec;45(13):2202-2204

Dept. of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University.

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December 2018

First report of an Asian family with gastric adenocarcinoma and proximal polyposis of the stomach (GAPPS) revealed with the germline mutation of the APC exon 1B promoter region.

Gastric Cancer 2018 11 2;21(6):1058-1063. Epub 2018 Jul 2.

Department of Gastroenterology and Oncology, Tokushima University Graduate School of Biomedical Sciences, 3-18-15, Kuramoto-cho, Tokushima city, Tokushima, 770-8503, Japan.

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http://dx.doi.org/10.1007/s10120-018-0855-5DOI Listing
November 2018

Identification of the Coiled-Coil Domain as an Essential Methyl-CpG-Binding Domain Protein 3 Element for Preserving Lineage Commitment Potential of Embryonic Stem Cells.

Stem Cells 2018 09 15;36(9):1355-1367. Epub 2018 Jul 15.

Division of Developmental Biology, Research Center for Genomic Medicine, Saitama Medical University, Yamane Hidaka, Saitama, Japan.

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http://dx.doi.org/10.1002/stem.2849DOI Listing
September 2018

A Method for Identifying Mouse Pancreatic Ducts.

Tissue Eng Part C Methods 2018 08;24(8):480-485

1 Department of Nutritional Science and Food Safety, Faculty of Applied Bioscience, Tokyo University of Agriculture , Tokyo, Japan .

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http://dx.doi.org/10.1089/ten.TEC.2018.0127DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6088256PMC
August 2018

Characteristics of MUTYH variants in Japanese colorectal polyposis patients.

Int J Clin Oncol 2018 Jun 12;23(3):497-503. Epub 2018 Jan 12.

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1007/s10147-017-1234-7DOI Listing
June 2018

Barth Syndrome: Different Approaches to Diagnosis.

J Pediatr 2018 02 15;193:256-260. Epub 2017 Dec 15.

Division of Functional Genomics and Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University, Saitama, Japan; Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University, Saitama, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.jpeds.2017.09.075DOI Listing
February 2018

HDR-del: A tool based on Hamming distance for prioritizing pathogenic chromosomal deletions in exome sequencing.

Hum Mutat 2017 12 21;38(12):1796-1800. Epub 2017 Sep 21.

Laboratory of Statistical Genetics, Rockefeller University, New York.

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http://dx.doi.org/10.1002/humu.23298DOI Listing
December 2017

Prevalence and clinicopathologic/molecular characteristics of mismatch repair-deficient colorectal cancer in the under-50-year-old Japanese population.

Surg Today 2017 Sep 3;47(9):1135-1146. Epub 2017 Mar 3.

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, 1981 Kamoda, Kawagoe, Saitama, 350-8550, Japan.

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http://dx.doi.org/10.1007/s00595-017-1486-xDOI Listing
September 2017

FANTOM5 CAGE profiles of human and mouse samples.

Authors:
Shuhei Noguchi Takahiro Arakawa Shiro Fukuda Masaaki Furuno Akira Hasegawa Fumi Hori Sachi Ishikawa-Kato Kaoru Kaida Ai Kaiho Mutsumi Kanamori-Katayama Tsugumi Kawashima Miki Kojima Atsutaka Kubosaki Ri-Ichiroh Manabe Mitsuyoshi Murata Sayaka Nagao-Sato Kenichi Nakazato Noriko Ninomiya Hiromi Nishiyori-Sueki Shohei Noma Eri Saijyo Akiko Saka Mizuho Sakai Christophe Simon Naoko Suzuki Michihira Tagami Shoko Watanabe Shigehiro Yoshida Peter Arner Richard A Axton Magda Babina J Kenneth Baillie Timothy C Barnett Anthony G Beckhouse Antje Blumenthal Beatrice Bodega Alessandro Bonetti James Briggs Frank Brombacher Ailsa J Carlisle Hans C Clevers Carrie A Davis Michael Detmar Taeko Dohi Albert S B Edge Matthias Edinger Anna Ehrlund Karl Ekwall Mitsuhiro Endoh Hideki Enomoto Afsaneh Eslami Michela Fagiolini Lynsey Fairbairn Mary C Farach-Carson Geoffrey J Faulkner Carmelo Ferrai Malcolm E Fisher Lesley M Forrester Rie Fujita Jun-Ichi Furusawa Teunis B Geijtenbeek Thomas Gingeras Daniel Goldowitz Sven Guhl Reto Guler Stefano Gustincich Thomas J Ha Masahide Hamaguchi Mitsuko Hara Yuki Hasegawa Meenhard Herlyn Peter Heutink Kelly J Hitchens David A Hume Tomokatsu Ikawa Yuri Ishizu Chieko Kai Hiroshi Kawamoto Yuki I Kawamura Judith S Kempfle Tony J Kenna Juha Kere Levon M Khachigian Toshio Kitamura Sarah Klein S Peter Klinken Alan J Knox Soichi Kojima Haruhiko Koseki Shigeo Koyasu Weonju Lee Andreas Lennartsson Alan Mackay-Sim Niklas Mejhert Yosuke Mizuno Hiromasa Morikawa Mitsuru Morimoto Kazuyo Moro Kelly J Morris Hozumi Motohashi Christine L Mummery Yutaka Nakachi Fumio Nakahara Toshiyuki Nakamura Yukio Nakamura Tadasuke Nozaki Soichi Ogishima Naganari Ohkura Hiroshi Ohno Mitsuhiro Ohshima Mariko Okada-Hatakeyama Yasushi Okazaki Valerio Orlando Dmitry A Ovchinnikov Robert Passier Margaret Patrikakis Ana Pombo Swati Pradhan-Bhatt Xian-Yang Qin Michael Rehli Patrizia Rizzu Sugata Roy Antti Sajantila Shimon Sakaguchi Hiroki Sato Hironori Satoh Suzana Savvi Alka Saxena Christian Schmidl Claudio Schneider Gundula G Schulze-Tanzil Anita Schwegmann Guojun Sheng Jay W Shin Daisuke Sugiyama Takaaki Sugiyama Kim M Summers Naoko Takahashi Jun Takai Hiroshi Tanaka Hideki Tatsukawa Andru Tomoiu Hiroo Toyoda Marc van de Wetering Linda M van den Berg Roberto Verardo Dipti Vijayan Christine A Wells Louise N Winteringham Ernst Wolvetang Yoko Yamaguchi Masayuki Yamamoto Chiyo Yanagi-Mizuochi Misako Yoneda Yohei Yonekura Peter G Zhang Silvia Zucchelli Imad Abugessaisa Erik Arner Jayson Harshbarger Atsushi Kondo Timo Lassmann Marina Lizio Serkan Sahin Thierry Sengstag Jessica Severin Hisashi Shimoji Masanori Suzuki Harukazu Suzuki Jun Kawai Naoto Kondo Masayoshi Itoh Carsten O Daub Takeya Kasukawa Hideya Kawaji Piero Carninci Alistair R R Forrest Yoshihide Hayashizaki

Sci Data 2017 08 29;4:170112. Epub 2017 Aug 29.

RIKEN Omics Science Center, Yokohama, Kanagawa 230-0045, Japan.

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http://dx.doi.org/10.1038/sdata.2017.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5574368PMC
August 2017

A novel mutation in TAZ causes mitochondrial respiratory chain disorder without cardiomyopathy.

J Hum Genet 2017 Apr 26;62(5):539-547. Epub 2017 Jan 26.

Division of Functional Genomics & Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1038/jhg.2016.165DOI Listing
April 2017

Demeanor of rivaroxaban in activated/inactivated FXa.

J Pharmacol Sci 2017 Mar 24;133(3):156-161. Epub 2017 Feb 24.

Department of Cardiology, Saitama Medical University, International Medical Center, Saitama, Japan; Research Administration Center, Saitama Medical University, Saitama, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.jphs.2017.02.010DOI Listing
March 2017

Prevalence of Lynch syndrome and Lynch-like syndrome among patients with colorectal cancer in a Japanese hospital-based population.

Jpn J Clin Oncol 2017 Feb;47(2):108-117

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Japan.

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http://dx.doi.org/10.1093/jjco/hyw178DOI Listing
February 2017

Loss of miR-542-3p enhances IGFBP-1 expression in decidualizing human endometrial stromal cells.

Sci Rep 2017 01 4;7:40001. Epub 2017 Jan 4.

Department of Obstetrics and Gynecology, Saitama Medical University, 38 Morohongo, Moroyama, Iruma-gun, Saitama, Japan.

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http://dx.doi.org/10.1038/srep40001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5209665PMC
January 2017

HDR: a statistical two-step approach successfully identifies disease genes in autosomal recessive families.

J Hum Genet 2016 Nov 30;61(11):959-963. Epub 2016 Jun 30.

Laboratory of Statistical Genetics, Rockefeller University, New York, NY, USA.

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http://dx.doi.org/10.1038/jhg.2016.85DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5411490PMC
November 2016

Rapid detection of germline mutations for hereditary gastrointestinal polyposis/cancers using HaloPlex target enrichment and high-throughput sequencing technologies.

Fam Cancer 2016 10;15(4):553-62

Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University, 1397-1 Yamane, Hidaka, Saitama, 350-1241, Japan.

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http://dx.doi.org/10.1007/s10689-016-9872-xDOI Listing
October 2016

Dried blood spots for newborn screening allows easy determination of a high heteroplasmy rate in severe infantile cardiomyopathy.

Int J Cardiol 2016 Oct 29;221:446-9. Epub 2016 Jun 29.

Division of Functional Genomics & Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University, 350-1241, Japan; Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University, 350-1241, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.ijcard.2016.06.287DOI Listing
October 2016

An inhibitor of fibroblast growth factor receptor-1 (FGFR1) promotes late-stage terminal differentiation from NGN3+ pancreatic endocrine progenitors.

Sci Rep 2016 10 27;6:35908. Epub 2016 Oct 27.

Division of Functional Genomics and Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University, Saitama, Japan.

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http://dx.doi.org/10.1038/srep35908DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5081516PMC
October 2016

Rapidly progressive infantile cardiomyopathy with mitochondrial respiratory chain complex V deficiency due to loss of ATPase 6 and 8 protein.

Int J Cardiol 2016 Mar 7;207:203-5. Epub 2016 Jan 7.

Division of Functional Genomics & Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University, Japan; Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.ijcard.2016.01.026DOI Listing
March 2016

Loss of MAX results in meiotic entry in mouse embryonic and germline stem cells.

Nat Commun 2016 Mar 30;7:11056. Epub 2016 Mar 30.

Division of Developmental Biology, Research Center for Genomic Medicine, Saitama Medical University, Yamane Hidaka, Saitama 350-1241, Japan.

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http://dx.doi.org/10.1038/ncomms11056DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4820925PMC
March 2016

Identification of a Japanese Lynch syndrome patient with large deletion in the 3' region of the EPCAM gene.

Jpn J Clin Oncol 2016 Feb 27;46(2):178-84. Epub 2015 Nov 27.

Department of Digestive Tract and General Surgery, Saitama Medical Center, Saitama Medical University, Kawagoe.

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http://dx.doi.org/10.1093/jjco/hyv172DOI Listing
February 2016

Intra-mitochondrial Methylation Deficiency Due to Mutations in SLC25A26.

Am J Hum Genet 2015 Nov 29;97(5):761-8. Epub 2015 Oct 29.

Max Planck Institute Biology of Ageing - Karolinska Institutet Laboratory, Division of Metabolic Diseases, Department of Laboratory Medicine, Karolinska Institutet, 171 77 Stockholm, Sweden; Centre for Inherited Metabolic Diseases, Karolinska University Hospital, 171 76 Stockholm, Sweden; Science for Life Laboratory and Department of Molecular Medicine and Surgery, Karolinska Institutet, 171 76 Stockholm, Sweden.

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http://dx.doi.org/10.1016/j.ajhg.2015.09.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4667130PMC
November 2015

MicroRNA-135b suppresses extravillous trophoblast-derived HTR-8/SVneo cell invasion by directly down regulating CXCL12 under low oxygen conditions.

Biochem Biophys Res Commun 2015 May 17;461(2):421-6. Epub 2015 Apr 17.

Department of Obstetrics and Gynecology, Saitama Medical University, 38 Morohongo, Moroyama-machi, Iruma-gun, Saitama 350-0495, Japan; Department of Obstetrics and Gynecology, Juntendo University Graduate School of Medicine, 2-1-1 Hongo, Bunkyo-ku, Tokyo 113-8421, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.bbrc.2015.04.055DOI Listing
May 2015

Gene expression profile of the neonatal female mouse brain after administration of testosterone propionate.

J Sex Med 2015 Apr 28;12(4):887-96. Epub 2015 Jan 28.

Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University, Hidaka, Saitama, Japan.

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http://dx.doi.org/10.1111/jsm.12802DOI Listing
April 2015

Functional compensation between Myc and PI3K signaling supports self-renewal of embryonic stem cells.

Stem Cells 2015 Mar;33(3):713-25

Division of Developmental Biology, Research Center for Genomic Medicine, Saitama Medical University, Yamane, Hidaka, Saitama, Japan; Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Kawaguchi, Saitama, Japan; Gene Expression Laboratory, Salk Institute for Biological Studies, La Jolla, California, USA.

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http://dx.doi.org/10.1002/stem.1893DOI Listing
March 2015

Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells.

Authors:
Erik Arner Carsten O Daub Kristoffer Vitting-Seerup Robin Andersson Berit Lilje Finn Drabløs Andreas Lennartsson Michelle Rönnerblad Olga Hrydziuszko Morana Vitezic Tom C Freeman Ahmad M N Alhendi Peter Arner Richard Axton J Kenneth Baillie Anthony Beckhouse Beatrice Bodega James Briggs Frank Brombacher Margaret Davis Michael Detmar Anna Ehrlund Mitsuhiro Endoh Afsaneh Eslami Michela Fagiolini Lynsey Fairbairn Geoffrey J Faulkner Carmelo Ferrai Malcolm E Fisher Lesley Forrester Daniel Goldowitz Reto Guler Thomas Ha Mitsuko Hara Meenhard Herlyn Tomokatsu Ikawa Chieko Kai Hiroshi Kawamoto Levon M Khachigian S Peter Klinken Soichi Kojima Haruhiko Koseki Sarah Klein Niklas Mejhert Ken Miyaguchi Yosuke Mizuno Mitsuru Morimoto Kelly J Morris Christine Mummery Yutaka Nakachi Soichi Ogishima Mariko Okada-Hatakeyama Yasushi Okazaki Valerio Orlando Dmitry Ovchinnikov Robert Passier Margaret Patrikakis Ana Pombo Xian-Yang Qin Sugata Roy Hiroki Sato Suzana Savvi Alka Saxena Anita Schwegmann Daisuke Sugiyama Rolf Swoboda Hiroshi Tanaka Andru Tomoiu Louise N Winteringham Ernst Wolvetang Chiyo Yanagi-Mizuochi Misako Yoneda Susan Zabierowski Peter Zhang Imad Abugessaisa Nicolas Bertin Alexander D Diehl Shiro Fukuda Masaaki Furuno Jayson Harshbarger Akira Hasegawa Fumi Hori Sachi Ishikawa-Kato Yuri Ishizu Masayoshi Itoh Tsugumi Kawashima Miki Kojima Naoto Kondo Marina Lizio Terrence F Meehan Christopher J Mungall Mitsuyoshi Murata Hiromi Nishiyori-Sueki Serkan Sahin Sayaka Nagao-Sato Jessica Severin Michiel J L de Hoon Jun Kawai Takeya Kasukawa Timo Lassmann Harukazu Suzuki Hideya Kawaji Kim M Summers Christine Wells David A Hume Alistair R R Forrest Albin Sandelin Piero Carninci Yoshihide Hayashizaki

Science 2015 Feb 12;347(6225):1010-4. Epub 2015 Feb 12.

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http://dx.doi.org/10.1126/science.1259418DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4681433PMC
February 2015

Genomic aspects of common diseases.

Biochem Biophys Res Commun 2014 Sep;452(2):211-2

Research Center for Genomic Medicine, Saitama Medical University, 1397-1 Yamane Hidaka, Saitama 350-1241, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.bbrc.2014.09.036DOI Listing
September 2014

New MT-ND6 and NDUFA1 mutations in mitochondrial respiratory chain disorders.

Ann Clin Transl Neurol 2014 May 28;1(5):361-9. Epub 2014 Apr 28.

Division of Functional Genomics & Systems Medicine, Research Center for Genomic Medicine, Saitama Medical University Hidaka, Japan ; Division of Translational Research, Research Center for Genomic Medicine, Saitama Medical University Hidaka, Japan.

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http://dx.doi.org/10.1002/acn3.59DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4184687PMC
May 2014

Molecular diagnosis of mitochondrial respiratory chain disorders in Japan: focusing on mitochondrial DNA depletion syndrome.

Pediatr Int 2014 Apr 6;56(2):180-7. Epub 2014 Mar 6.

Department of Pediatrics, Faculty of Medicine, Saitama Medical University, Saitama, Japan; Murdoch Childrens Research Institute, Royal Children's Hospital and Department of Paediatrics, University of Melbourne, Melbourne, Australia.

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http://dx.doi.org/10.1111/ped.12249DOI Listing
April 2014

A promoter-level mammalian expression atlas.

Authors:
Alistair R R Forrest Hideya Kawaji Michael Rehli J Kenneth Baillie Michiel J L de Hoon Vanja Haberle Timo Lassmann Ivan V Kulakovskiy Marina Lizio Masayoshi Itoh Robin Andersson Christopher J Mungall Terrence F Meehan Sebastian Schmeier Nicolas Bertin Mette Jørgensen Emmanuel Dimont Erik Arner Christian Schmidl Ulf Schaefer Yulia A Medvedeva Charles Plessy Morana Vitezic Jessica Severin Colin A Semple Yuri Ishizu Robert S Young Margherita Francescatto Intikhab Alam Davide Albanese Gabriel M Altschuler Takahiro Arakawa John A C Archer Peter Arner Magda Babina Sarah Rennie Piotr J Balwierz Anthony G Beckhouse Swati Pradhan-Bhatt Judith A Blake Antje Blumenthal Beatrice Bodega Alessandro Bonetti James Briggs Frank Brombacher A Maxwell Burroughs Andrea Califano Carlo V Cannistraci Daniel Carbajo Yun Chen Marco Chierici Yari Ciani Hans C Clevers Emiliano Dalla Carrie A Davis Michael Detmar Alexander D Diehl Taeko Dohi Finn Drabløs Albert S B Edge Matthias Edinger Karl Ekwall Mitsuhiro Endoh Hideki Enomoto Michela Fagiolini Lynsey Fairbairn Hai Fang Mary C Farach-Carson Geoffrey J Faulkner Alexander V Favorov Malcolm E Fisher Martin C Frith Rie Fujita Shiro Fukuda Cesare Furlanello Masaaki Furino Jun-ichi Furusawa Teunis B Geijtenbeek Andrew P Gibson Thomas Gingeras Daniel Goldowitz Julian Gough Sven Guhl Reto Guler Stefano Gustincich Thomas J Ha Masahide Hamaguchi Mitsuko Hara Matthias Harbers Jayson Harshbarger Akira Hasegawa Yuki Hasegawa Takehiro Hashimoto Meenhard Herlyn Kelly J Hitchens Shannan J Ho Sui Oliver M Hofmann Ilka Hoof Furni Hori Lukasz Huminiecki Kei Iida Tomokatsu Ikawa Boris R Jankovic Hui Jia Anagha Joshi Giuseppe Jurman Bogumil Kaczkowski Chieko Kai Kaoru Kaida Ai Kaiho Kazuhiro Kajiyama Mutsumi Kanamori-Katayama Artem S Kasianov Takeya Kasukawa Shintaro Katayama Sachi Kato Shuji Kawaguchi Hiroshi Kawamoto Yuki I Kawamura Tsugumi Kawashima Judith S Kempfle Tony J Kenna Juha Kere Levon M Khachigian Toshio Kitamura S Peter Klinken Alan J Knox Miki Kojima Soichi Kojima Naoto Kondo Haruhiko Koseki Shigeo Koyasu Sarah Krampitz Atsutaka Kubosaki Andrew T Kwon Jeroen F J Laros Weonju Lee Andreas Lennartsson Kang Li Berit Lilje Leonard Lipovich Alan Mackay-Sim Ri-ichiroh Manabe Jessica C Mar Benoit Marchand Anthony Mathelier Niklas Mejhert Alison Meynert Yosuke Mizuno David A de Lima Morais Hiromasa Morikawa Mitsuru Morimoto Kazuyo Moro Efthymios Motakis Hozumi Motohashi Christine L Mummery Mitsuyoshi Murata Sayaka Nagao-Sato Yutaka Nakachi Fumio Nakahara Toshiyuki Nakamura Yukio Nakamura Kenichi Nakazato Erik van Nimwegen Noriko Ninomiya Hiromi Nishiyori Shohei Noma Shohei Noma Tadasuke Noazaki Soichi Ogishima Naganari Ohkura Hiroko Ohimiya Hiroshi Ohno Mitsuhiro Ohshima Mariko Okada-Hatakeyama Yasushi Okazaki Valerio Orlando Dmitry A Ovchinnikov Arnab Pain Robert Passier Margaret Patrikakis Helena Persson Silvano Piazza James G D Prendergast Owen J L Rackham Jordan A Ramilowski Mamoon Rashid Timothy Ravasi Patrizia Rizzu Marco Roncador Sugata Roy Morten B Rye Eri Saijyo Antti Sajantila Akiko Saka Shimon Sakaguchi Mizuho Sakai Hiroki Sato Suzana Savvi Alka Saxena Claudio Schneider Erik A Schultes Gundula G Schulze-Tanzil Anita Schwegmann Thierry Sengstag Guojun Sheng Hisashi Shimoji Yishai Shimoni Jay W Shin Christophe Simon Daisuke Sugiyama Takaai Sugiyama Masanori Suzuki Naoko Suzuki Rolf K Swoboda Peter A C 't Hoen Michihira Tagami Naoko Takahashi Jun Takai Hiroshi Tanaka Hideki Tatsukawa Zuotian Tatum Mark Thompson Hiroo Toyodo Tetsuro Toyoda Elvind Valen Marc van de Wetering Linda M van den Berg Roberto Verado Dipti Vijayan Ilya E Vorontsov Wyeth W Wasserman Shoko Watanabe Christine A Wells Louise N Winteringham Ernst Wolvetang Emily J Wood Yoko Yamaguchi Masayuki Yamamoto Misako Yoneda Yohei Yonekura Shigehiro Yoshida Susan E Zabierowski Peter G Zhang Xiaobei Zhao Silvia Zucchelli Kim M Summers Harukazu Suzuki Carsten O Daub Jun Kawai Peter Heutink Winston Hide Tom C Freeman Boris Lenhard Vladimir B Bajic Martin S Taylor Vsevolod J Makeev Albin Sandelin David A Hume Piero Carninci Yoshihide Hayashizaki

Nature 2014 Mar;507(7493):462-70

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