Yasunobu Okamura

Yasunobu Okamura

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Yasunobu Okamura

Yasunobu Okamura

Publications by authors named "Yasunobu Okamura"

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13Publications

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Genomic testing for pancreatic cancer in clinical practice as real-world evidence.

Pancreatology 2018 Sep 25;18(6):647-654. Epub 2018 Jul 25.

Division of Clinical Cancer Genomics, Hokkaido University Hospital, Sapporo, Japan.

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http://dx.doi.org/10.1016/j.pan.2018.07.006DOI Listing
September 2018

Matataki: an ultrafast mRNA quantification method for large-scale reanalysis of RNA-Seq data.

BMC Bioinformatics 2018 07 16;19(1):266. Epub 2018 Jul 16.

Graduate School of Information Sciences, Tohoku University, Sendai, Miyagi, Japan.

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http://dx.doi.org/10.1186/s12859-018-2279-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6048772PMC
July 2018

Comparison of Gene Coexpression Profiles and Construction of Conserved Gene Networks to Find Functional Modules.

PLoS One 2015 6;10(7):e0132039. Epub 2015 Jul 6.

Graduate School of Information Sciences, Tohoku University, Sendai, Miyagi, Japan; Institute of Development, Aging and Cancer, Tohoku University, Sendai, Miyagi, Japan; Tohoku Medical Megabank Organization, Sendai, Miyagi, Japan.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0132039PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4493118PMC
April 2016

ATTED-II in 2016: A Plant Coexpression Database Towards Lineage-Specific Coexpression.

Plant Cell Physiol 2016 Jan 6;57(1):e5. Epub 2015 Nov 6.

Graduate School of Information Sciences, Tohoku University, 6-3-09, Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8679 Japan Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency, Kawaguchi, Saitama, Japan

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http://dx.doi.org/10.1093/pcp/pcv165DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4722172PMC
January 2016

ALCOdb: Gene Coexpression Database for Microalgae.

Plant Cell Physiol 2016 Jan 7;57(1):e3. Epub 2015 Dec 7.

Graduate School of Information Sciences, Tohoku University, 6-3-09, Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8579 Japan Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Kawaguchi, Saitama, Japan

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http://dx.doi.org/10.1093/pcp/pcv190DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4722175PMC
January 2016

COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems.

Nucleic Acids Res 2015 Jan 11;43(Database issue):D82-6. Epub 2014 Nov 11.

Graduate School of Information Sciences, Tohoku University, 6-3-09, Aramaki-Aza-Aoba, Aoba-ku, Sendai 980-8679, Japan Institute of Development, Aging, and Cancer, Tohoku University, Sendai 980-8575, Japan Tohoku Medical Megabank Organization, Tohoku University, Sendai 980-8573, Japan

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http://dx.doi.org/10.1093/nar/gku1163DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383961PMC
January 2015

BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.

J Biomed Semantics 2014 Feb 5;5(1). Epub 2014 Feb 5.

Database Center for Life Science, Research Organization of Information and Systems, 2-11-16, Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1186/2041-1480-5-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3978116PMC
February 2014

ATTED-II in 2014: evaluation of gene coexpression in agriculturally important plants.

Plant Cell Physiol 2014 Jan 10;55(1):e6. Epub 2013 Dec 10.

Graduate School of Information Sciences, Tohoku University, 6-3-09, Aramaki-Aza-Aoba, Aoba-ku, Sendai, 980-8679 Japan.

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http://dx.doi.org/10.1093/pcp/pct178DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3894708PMC
January 2014

COXPRESdb: a database of comparative gene coexpression networks of eleven species for mammals.

Nucleic Acids Res 2013 Jan 29;41(Database issue):D1014-20. Epub 2012 Nov 29.

Graduate School of Information Sciences, Tohoku University, Sendai 980-8679, Japan.

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http://dx.doi.org/10.1093/nar/gks1014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531062PMC
January 2013