Xinghua Shi

Hum Mutat 2019 Sep;40(9):1519-1529

Human Genetics, BioMarin Pharmaceutical, San Rafael, California.

Nanoscale 2019 Sep 18. Epub 2019 Sep 18.

CAS Key Laboratory of Standardization and Measurement for Nanotechnology, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, China.

Genes (Basel) 2019 Aug 28;10(9). Epub 2019 Aug 28.

Department of Bioinformatics and Genomics, College of Computing and Informatics, University of North Carolina at Charlotte, 9201 University City Blvd, Charlotte, NC 28223, USA.

Biomater Sci 2019 Jul 28;7(7):3016-3024. Epub 2019 May 28.

CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, Laboratory of Theoretical and Computational Nanoscience, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P. R. China. and University of Chinese Academy of Sciences, Beijing 100049, P. R. China.

ACS Nano 2019 Jul 12;13(7):7676-7689. Epub 2019 Jun 12.

Shanghai Institute of Materia Medica , Chinese Academy of Sciences , Shanghai 201203 , China.

Chemistry 2019 Jul 17. Epub 2019 Jul 17.

CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, Laboratory of Theoretical and Computational Nanoscience, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 11 BeiYiTiao, ZhongGuanCun, Beijing, 100190, China.

IEEE/ACM Trans Comput Biol Bioinform 2019 May 28. Epub 2019 May 28.

Angew Chem Int Ed Engl 2019 Apr 5;58(15):4911-4916. Epub 2019 Mar 5.

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, State Key Laboratory of Organic-Inorganic Composites, Bionanomaterials & Translational Engineering Laboratory, Beijing Key Laboratory of Bioprocess, Beijing Laboratory of Biomedical Materials, Beijing University of Chemical Technology, Beijing, 100029, China.

Nat Commun 2019 04 16;10(1):1784. Epub 2019 Apr 16.

The Jackson Laboratory for Genomic Medicine, Farmington, CT, 06032, USA.

Nanoscale 2019 Mar;11(11):4911-4917

Laboratory of Theoretical and Computational Nanoscience, CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, China.

Proc Natl Acad Sci U S A 2019 03 5;116(12):5362-5369. Epub 2019 Mar 5.

School of Engineering, Brown University, Providence, RI 02912

Adv Mater 2019 Feb 14;31(6):e1804395. Epub 2018 Dec 14.

Chinese Academy of Sciences (CAS) Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology (NCNST), 11 Beiyitiao, Zhongguancun, Beijing, 100190, China.

Mol Med Rep 2019 Feb 12;19(2):1185-1193. Epub 2018 Dec 12.

Synopsis of Golden Chamber Department, Chinese Medicine College, Beijing University of Chinese Medicine, Chaoyang, Beijing 100029, P.R. China.

G3 (Bethesda) 2019 01 9;9(1):13-19. Epub 2019 Jan 9.

Department of Biochemistry and Molecular Biology, University of Calgary, Canada

ACS Nano 2019 01 31;13(1):176-186. Epub 2018 Dec 31.

CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, CAS Center for Excellence in Nanoscience , National Center for Nanoscience and Technology of China , No. 11, First North Road , Zhongguancun, Beijing 100190 , P. R. China.

Phys Chem Chem Phys 2019 Jan;21(4):1784-1790

Laboratory of Theoretical and Computational Nanoscience, CAS Key Laboratory of Nanosystem and Hierarchy Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Chinese Academy of Sciences, Beijing 100190, P. R. China.

Adv Mater 2018 Dec 27:e1805368. Epub 2018 Dec 27.

CAS Key Laboratory for Nanosystem and Hierarchy Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Chinese Academy of Sciences, Beijing, 100190, P. R. China.

Phys Rev Lett 2018 11;121(19):199902

Nat Chem 2018 09 23;10(9):961-967. Epub 2018 Jul 23.

CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Centre for Nanoscience and Technology, Beijing, China.

Adv Mater 2018 Sep 1;30(38):e1800074. Epub 2018 Aug 1.

CAS Key Laboratory of Standardization and Measurement for Nanotechnology, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China.

Nanoscale 2018 Sep;10(35):16425-16430

CAS Key Laboratory of Nanosystem and Hierachical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing 100190, P.R. China.

Nat Commun 2018 09 18;9(1):3808. Epub 2018 Sep 18.

CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, 100190, Beijing, China.

Angew Chem Int Ed Engl 2018 07 19;57(29):9059-9063. Epub 2018 Jun 19.

CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Beijing, 100190, P. R. China.

Nat Commun 2018 07 3;9(1):2599. Epub 2018 Jul 3.

University of Chinese Academy of Sciences, 100049, Beijing, China.

Nat Commun 2018 07 4;9(1):2607. Epub 2018 Jul 4.

School of Engineering, Brown University, Providence, RI, 02912, USA.

Adv Mater 2018 Jun 19;30(23):e1800180. Epub 2018 Apr 19.

Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Bionanomaterials & Translational Engineering Laboratory, State Key Laboratory of Organic-Inorganic Composites, Beijing Laboratory of Biomedical Materials, Beijing University of Chemical Technology, Beijing, 100029, China.

Small 2018 Jun 8:e1801586. Epub 2018 Jun 8.

Laboratory for Catalysis Engineering, School of Chemical and Biomolecular Engineering, The University of Sydney, NSW, 2006, Australia.

iScience 2018 Jun 14;4:302-311. Epub 2018 Jun 14.

Beijing Engineering Research Center for BioNanotechnology and CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, CAS Center for Excellence in Nanoscience, National Center for NanoScience and Technology, No. 11 Zhongguancun Beiyitiao, Beijing 100190, P. R. China; University of Chinese Academy of Sciences, 19 A Yuquan Road, Shijingshan District, Beijing 100049, P. R. China. Electronic address:

IEEE/ACM Trans Comput Biol Bioinform 2017 Sep-Oct;14(5):1013-1027

Adv Mater 2018 May 18;30(22):e1706924. Epub 2018 Apr 18.

National Center for Nanoscience and Technology, No. 11 ZhongGuanCun BeiYiTiao, Beijing, 100190, P. R. China.

Bioinformatics 2018 03;34(6):901-910

Department of Biostatistics, University of Alabama at Birmingham, Birmingham, AL 35294, USA.

Nanoscale 2018 Feb;10(8):3990-3996

CAS Key Laboratory for Biomedical Effects of Nanomaterials and Nanosafety, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology, Chinese Academy of Sciences, Beijing 100190, China.

IEEE/ACM Trans Comput Biol Bioinform 2019 Mar-Apr;16(2):475-489. Epub 2017 Dec 4.

Nano Lett 2017 11 11;17(11):7125-7130. Epub 2017 Oct 11.

CAS Key Laboratory of Nanosystem and Hierarchical Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology , 11 BeiYiTiao, ZhongGuanCun, Beijing 100190, China.

BMC Genomics 2017 Nov 17;18(Suppl 9):845. Epub 2017 Nov 17.

Department of Bioinformatics and Genomics, College of Computing and Informatics, University of North Carolina at Charlotte, University City Blvd, Charlotte, NC, USA.

J Am Chem Soc 2017 10 21;139(39):13804-13810. Epub 2017 Sep 21.

Beijing National Laboratory for Molecular Sciences, State Key Lab of Rare Earth Materials Chemistry and Applications, PKU-HKU Joint Lab in Rare Earth Materials and Bioinorganic Chemistry, Peking University , Beijing 100871, China.

BMC Genomics 2017 10 16;18(Suppl 7):756. Epub 2017 Oct 16.

Department of Bioinformatics and Genomics, College of Computing and Informatics, University of North Carolina at Charlotte, Charlotte, NC, 28223, USA.

Anal Chem 2017 09 11;89(17):9299-9306. Epub 2017 Aug 11.

School of Chemistry and Molecular Engineering, East China Normal University , Shanghai 200241, China.

Sci Rep 2017 08 24;7(1):9313. Epub 2017 Aug 24.

Department of Bioinformatics and Genomics, The University of North Carolina at Charlotte, Charlotte, NC, 28223, USA.

ACS Nano 2017 07 3;11(7):7251-7258. Epub 2017 Jul 3.

CAS Key Laboratory of Nanosystem and Hierarchial Fabrication, CAS Center for Excellence in Nanoscience, National Center for Nanoscience and Technology , Beijing 100190, P.R. China.

Soft Matter 2017 Jun;13(23):4294-4304

State Key Laboratory of Nonlinear Mechanics (LNM) and Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing, 100190, China.

Small 2017 03 12;13(9). Epub 2016 Dec 12.

Beijing Engineering Research Center for BioNanotechnology and CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, CAS Center for Excellence in Nanoscience, National Center for NanoScience and Technology, No. 11 Beiyitiao, Zhongguancun, Beijing, 100190, P. R. China.

Oncotarget 2017 Mar;8(12):19980-19996

Clinical College, Yancheng Institute of Health Sciences, Yancheng, Jiangsu 224000, China.

Ann N Y Acad Sci 2017 01 14;1387(1):61-72. Epub 2016 Sep 14.

Department of Computer Science and Computer Engineering, University of Arkansas, Fayetteville, Arkansas.

Nano Lett 2016 11 7;16(11):7176-7182. Epub 2016 Oct 7.

School of Engineering, Brown University , Providence, Rhode Island 02912, United States.

Anal Chem 2016 07 29;88(14):7344-51. Epub 2016 Jun 29.

State Key Laboratory of Nonlinear Mechanics, Institute of Mechanics, Chinese Academy of Sciences , Beijing 100190, China.

Sci Rep 2016 Mar 22;6:23509. Epub 2016 Mar 22.

Department of Mechanical Engineering, the Hong Kong Polytechnic University, Hung Hom, Kowloon, Hong Kong SAR, China.

Gastroenterol Res Pract 2016 10;2016:6195426. Epub 2016 Jan 10.

School of Clinical Medicine, Yancheng Institute of Health Sciences, Yancheng 224005, China.

Nanoscale 2015 Nov;7(43):18025-9

State Key Laboratory of Nonlinear Mechanics, Beijing Key Laboratory of Engineered Construction and Mechanobiology, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China.

Nature 2015 Oct;526(7571):75-81

European Molecular Biology Laboratory (EMBL), Genome Biology Unit, Meyerhofstr. 1, 69117 Heidelberg, Germany.

ACS Nano 2015 Oct 14;9(10):9912-21. Epub 2015 Oct 14.

Beijing Engineering Research Center for BioNanotechnology & CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, National Center for Nanoscience and Technology , Beijing 100190, China.

Proc Natl Acad Sci U S A 2015 Sep 31;112(38):11870-5. Epub 2015 Aug 31.

Transcription Imaging Consortium, Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147; Department of Anatomy and Structural Biology, Albert Einstein College of Medicine, Bronx, NY 10461; Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine, Bronx, NY 10461

Soft Matter 2015 Aug;11(31):6305-17

The George W. Woodruff School of Mechanical Engineering, Georgia Institute of Technology, Atlanta, GA 30332, USA.

Sci Rep 2015 Aug 3;5:12808. Epub 2015 Aug 3.

1] Bioinspired Engineering and Biomechanics Center (BEBC), Xi'an Jiaotong University, Xi'an 710049, P.R. China [2] The Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an 710049, P.R. China.

BMC Bioinformatics 2015 18;16 Suppl 5:S5. Epub 2015 Mar 18.

Sci Rep 2015 Jul 16;5:12177. Epub 2015 Jul 16.

LNM, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190.

Sci Rep 2015 May 29;5:10537. Epub 2015 May 29.

LNM, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, P.R. China.

Angew Chem Int Ed Engl 2015 Mar 20;54(13):3952-6. Epub 2015 Feb 20.

Beijing Engineering Research Center for BioNanotechnology & CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, National Center for NanoScience and Technology, No.11 ZhongGuanCun BeiYiTiao, Beijing, 100190 (P. R. China).

Adv Mater 2015 Feb 22;27(8):1402-7. Epub 2014 Dec 22.

Beijing Engineering Research Center for BioNanotechnology & CAS Key Laboratory for Biological Effects of Nanomaterials and Nanosafety, National Center for NanoScience and Technology, Beijing, 100190, P. R. China.

Nat Methods 2014 Dec 12;11(12):1233-6. Epub 2014 Oct 12.

1] Center for Biophysics and Computational Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA. [2] Department of Physics, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA. [3] Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA. [4] Howard Hughes Medical Institute, Urbana, Illinois, USA. [5] Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA.

PLoS One 2014 31;9(1):e87797. Epub 2014 Jan 31.

School of Computer Science and Technology, Xidian University, Xi'an, Shaanxi, China.

Lab Chip 2014 May 27;14(10):1673-7. Epub 2014 Mar 27.

Beijing Engineering Research Center for BioNanotechnology & Key Lab for Biological Effects of Nanomaterials and Nanosafety, National Center for NanoScience and Technology, Beijing, 100190, China.

J Comput Biol 2014 May 1;21(5):385-93. Epub 2014 Apr 1.

1 Toyota Technological Institute at Chicago , Chicago, Illinois.

Nano Lett 2014 Feb 24;14(2):1049-55. Epub 2014 Jan 24.

School of Engineering, Brown University , Providence, Rhode Island 02912, United States.

Soft Matter 2014 Jan;10(1):139-48

Key Laboratory of Thermo-Fluid Science and Engineering of Ministry of Education, School of Energy and Power Engineering, Xi'an Jiaotong University, Xi'an 710049, P.R. China.

ACS Nano 2013 Dec 26;7(12):10525-33. Epub 2013 Nov 26.

The State Key Laboratory of Nonlinear Mechanics (LNM), Institute of Mechanics, Chinese Academy of Sciences , Beijing, 100190, China.

Nat Chem 2013 Aug 30;5(8):692-7. Epub 2013 Jun 30.

Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

Nanoscale 2013 Jun;5(12):5450-5

LNM, Institute of Mechanics, Chinese Academy of Sciences, Beijing, 100190, PR China.

Nat Mater 2012 Sep 1;11(9):759-63. Epub 2012 Jul 1.

LNM, Institute of Mechanics, Chinese Academy of Sciences, Beijing 100190, China.

Nat Methods 2012 Apr 1;9(5):499-503. Epub 2012 Apr 1.

Howard Hughes Medical Institute, Urbana, Illinois, USA.

Genome Biol 2011 31;12(5):R52. Epub 2011 May 31.

Department of Pathology, Brigham and Women's Hospital, 75 Francis Street, Boston, MA 02115, USA.

Proc Natl Acad Sci U S A 2012 Jan 27;109(2):529-34. Epub 2011 Dec 27.

Department of Pathology, Brigham and Women's Hospital, Boston, MA 02115, USA.

Nat Nanotechnol 2011 Sep 18;6(11):714-9. Epub 2011 Sep 18.

School of Engineering, Brown University, Providence, Rhode Island 02912, USA.

Phys Rev Lett 2011 Aug 22;107(9):098101. Epub 2011 Aug 22.

School of Engineering, Brown University, Providence, Rhode Island 02912, USA.

J Am Chem Soc 2011 Jul 14;133(26):9964-7. Epub 2011 Jun 14.

Department of Chemistry, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

Nat Biotechnol 2011 May 8;29(6):512-20. Epub 2011 May 8.

The Centre for Applied Genomics, The Hospital for Sick Children, Toronto, Ontario, Canada.

Proc Natl Acad Sci U S A 2011 Mar 16;108(9):3459-60. Epub 2011 Feb 16.

Howard Hughes Medical Institute, Department of Physics, and Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, USA.

Biophys J 2011 Mar;100(5):1344-52

Department of Physics and the Center for the Physics of Living Cells, University of Illinois at Urbana-Champaign, Champaign, Illinois, USA.

Nature 2011 Feb;470(7332):59-65

Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, USA.

J Mol Graph Model 2010 Sep 27;29(2):171-7. Epub 2010 May 27.

Institute of High Performance Computing, 1 Fusionopolis Way, #16-16 Connexis, Singapore 138632, Singapore.

Anal Chem 2010 Jul;82(14):6132-8

Howard Hughes Medical Institute, Department of Physics, and Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

Small 2010 Mar;6(6):739-44

Division of Engineering, Brown University 610 Barus & Holley, 182 Hope Street Providence, RI 02912, USA.

Biochemistry 2007 Dec 21;46(50):14403-17. Epub 2007 Nov 21.

Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.

Proc Natl Acad Sci U S A 2007 Dec 11;104(51):20189-94. Epub 2007 Dec 11.

Department of Chemistry, Stanford University, Stanford, CA 94305-5080, USA.

Biochemistry 2007 Oct 6;46(43):12005-13. Epub 2007 Oct 6.

Institute of Molecular Biology and Department of Physics, University of Oregon, Eugene, Oregon 97403-1229, USA.

Biochemistry 2007 Oct 6;46(43):12014-25. Epub 2007 Oct 6.

Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.

J Phys Chem B 2007 Jul 26;111(28):8269-76. Epub 2007 Jun 26.

Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.

Nucleic Acids Res 2007 Jan 1;35(Database issue):D347-53. Epub 2006 Dec 1.

National Center for Supercomputing Applications, Urbana, IL 61801, USA.

Proc Natl Acad Sci U S A 2006 Sep 5;103(37):13722-7. Epub 2006 Sep 5.

Department of Chemistry, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.

Biochemistry 2005 Jun;44(24):8701-11

Department of Chemistry, Stanford University, Stanford, California 94305-5080, USA.

Biochemistry 2005 Apr;44(14):5510-24

Department of Chemistry, Stanford University, CA 94305, USA.