Xiaotu Ma

Theranostics 2019 24;9(3):747-760. Epub 2019 Jan 24.

Medical Isotopes Research Center and Department of Radiation Medicine, School of Basic Medical Sciences, Peking University, Beijing 100191, P. R. China.

Blood 2020 Jan;135(1):41-55

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN.

Adv Healthc Mater 2019 Sep 7;8(17):e1900661. Epub 2019 Aug 7.

Key Laboratory of Protein and Peptide Pharmaceuticals, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, 100101, P. R. China.

Biomater Sci 2019 Jul 9;7(7):2873-2888. Epub 2019 May 9.

Medical Isotopes Research Center and Department of Radiation Medicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, China and Key Laboratory of Protein and Peptide Pharmaceuticals, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.

Sci Rep 2019 Jul 17;9(1):10357. Epub 2019 Jul 17.

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.

Nat Commun 2019 06 26;10(1):2789. Epub 2019 Jun 26.

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.

Mol Cancer Res 2019 04 16;17(4):895-906. Epub 2019 Jan 16.

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, Tennessee.

Nat Genet 2019 04 29;51(4):694-704. Epub 2019 Mar 29.

Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.

Nat Med 2019 Mar;25(3):530

Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.

Genome Biol 2019 03 14;20(1):50. Epub 2019 Mar 14.

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.

Sci Rep 2019 Feb 7;9(1):1654. Epub 2019 Feb 7.

Department of Mechanical Engineering, Worcester Polytechnic Institute, Worcester, MA, 01609, USA.

Nat Commun 2018 09 27;9(1):3962. Epub 2018 Sep 27.

Department of Computational Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN, 38105, USA.

J Clin Oncol 2018 07 30;36(20):2078-2087. Epub 2018 May 30.

Zhaoming Wang, Carmen L. Wilson, John Easton, Andrew Thrasher, Heather Mulder, Dale J. Hedges, Shuoguo Wang, Michael C. Rusch, Michael N. Edmonson, Jennifer Q. Lanctot, Eric Caron, Kyla Shelton, Kelsey Currie, Matthew Lear, Aman Patel, Celeste Rosencrance, Ying Shao, Bhavin Vadodaria, Donald Yergeau, Yadav Sapkota, Russell J. Brooke, Wonjong Moon, Evadnie Rampersaud, Xiaotu Ma, Ti-Cheng Chang, Stephen V. Rice, Cynthia Pepper, Xin Zhou, Xiang Chen, Wenan Chen, Matthew J. Ehrhardt, Matthew J. Krasin, Rebecca M. Howell, Nicholas S. Phillips, Courtney Lewis, Deokumar Srivastava, Ching-Hon Pui, Chimene A. Kesserwan, Gang Wu, Kim E. Nichols, James R. Downing, Melissa M. Hudson, Yutaka Yasui, Leslie L. Robison, and Jinghui Zhang, St Jude Children's Research Hospital, Memphis, TN; Qi Liu, University of Alberta, Edmonton, Alberta, Canada; Shawn Levy, Angela Jones, and Braden Boone, HudsonAlpha Institute for Biotechnology, Huntsville, AL; and Rebecca M. Howell, The University of Texas MD Anderson Cancer Center, Houston, TX.

Nat Med 2018 Apr;24(4):526

Nature 2018 03 28;555(7696):371-376. Epub 2018 Feb 28.

Computational Biology, St Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.

Nat Med 2018 01 11;24(1):103-112. Epub 2017 Dec 11.

Clinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA.

BMC Genomics 2017 Nov 25;18(1):906. Epub 2017 Nov 25.

Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, 38105, USA.

Nat Genet 2017 Aug 3;49(8):1211-1218. Epub 2017 Jul 3.

Department of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

Nat Genet 2016 12 24;48(12):1481-1489. Epub 2016 Oct 24.

Department of Pathology, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.

EBioMedicine 2016 Nov 28;13:80-89. Epub 2016 Oct 28.

The Hamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; The Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Pathology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address:

J Thorac Oncol 2016 09 24;11(9):1469-81. Epub 2016 May 24.

Hamon Center for Therapeutic Oncology Research, University of Texas Southwestern Medical Center, Dallas, Texas; Department of Pathology and Harold Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, Texas. Electronic address:

J Thorac Oncol 2016 Mar 25;11(3):346-360. Epub 2015 Dec 25.

Cancer Prev Res (Phila) 2016 Jan 28;9(1):43-52. Epub 2015 Oct 28.

Department of Biological Sciences, University of Texas at Dallas, Richardson, Texas. Center for Systems Biology, University of Texas at Dallas, Richardson, Texas. Department of Bioengineering, University of Texas at Dallas, Richardson, Texas.

Blood 2015 Dec 2;126(26):2896-9. Epub 2015 Nov 2.

Departments of Oncology and Pathology, St. Jude Children's Research Hospital, Memphis, TN.

N Engl J Med 2015 Dec 18;373(24):2336-2346. Epub 2015 Nov 18.

Departments of Computational Biology (J.Z., G.W., M.N.E., D.H., X.M., X.Z., M.R.W., X.C., M.R., A.P., J.B.B., S.W.), Oncology (M.F.W., T.A.G., R.B.M., S.H.-D., R.N., E.Q., A.G., A.S.P., C.-H.P., K.E.N.), and Pathology (T.A.G., M.R.W., S.A.S., D.W.E., C.-H.P., J.R.D.) and the Pediatric Cancer Genome Project (J.Z., M.F.W., G.W., M.N.E., T.A.G., J.E., X.M., D.A.Y., B.V., X.C., R.B.M., S.H.-D., R.N., E.Q., S.A.S., M.R., A.P., J.B.B., S.W., M.S.W., A.G., D.W.E., A.S.P., C.-H.P., K.E.N., J.R.D.), St. Jude Children's Research Hospital, Memphis, TN; and the Department of Genetics and McDonnell Genome Institute, Washington University School of Medicine in St. Louis, St. Louis (L.D., E.R.M., R.K.W.).

Tumour Biol 2015 Sep 20;36(10):8147-58. Epub 2015 May 20.

Department of Translational Molecular Pathology, UT MD Anderson Cancer Center, Unit 2951, Life Science Plaza Building, 2130 W. Holcombe Blvd., Houston, TX, 77030, USA.

Nat Med 2015 Jun 11;21(6):563-71. Epub 2015 May 11.

1] Key Laboratory of Pediatric Hematology and Oncology Ministry of Health, Department of Hematology and Oncology, Shanghai Children's Medical Center, Shanghai Jiao Tong University School of Medicine, Shanghai, China. [2] Pediatric Translational Medicine Institute, Shanghai Jiao Tong University School of Medicine, Shanghai, China. [3] Department of Pharmacology, School of Basic Medicine and Collaborative Innovation Center for Translational Medicine, Shanghai Jiao Tong University School of Medicine, Shanghai, China. [4] Collaborative Innovation Center of Systems Biomedicine, National Research Center for Translational Medicine, Shanghai, China.

Cancer Cell 2015 May;27(5):712-27

Department of Developmental Neurobiology, St Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA; Department of Oncology, St Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA. Electronic address:

Nat Commun 2015 Mar 19;6:6604. Epub 2015 Mar 19.

Computational Biology, St Jude Children's Research Hospital, Memphis, Tennessee 38105, USA.

Cancer Discov 2014 Nov 15;4(11):1342-53. Epub 2014 Sep 15.

INSERM U830, Laboratory of Genetics and Cancer Biology, Institut Curie, Paris, France. Centre de Recherche, Institut Curie, Paris, France.

Brief Bioinform 2014 Sep 19;15(5):685-98. Epub 2013 Jun 19.

Cancer Res 2014 Sep 26;74(17):4694-705. Epub 2014 Jun 26.

Department of Clinical Cancer Prevention, The University of Texas MD Anderson Cancer Center, Houston, Texas.

Nat Genet 2014 May 6;46(5):444-450. Epub 2014 Apr 6.

Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN 38105.

Epigenetics 2014 Apr 16;9(4):523-32. Epub 2014 Jan 16.

Department of Genetics; Geisel School of Medicine at Dartmouth; Hanover, NH USA; Institute for Quantitative Biomedical Sciences; Geisel School of Medicine at Dartmouth; Lebanon, NH USA; Norris Cotton Cancer Center; Geisel School of Medicine at Dartmouth; Lebanon, NH USA.

Cancer Epidemiol Biomarkers Prev 2013 Dec 2;22(12):2212-21. Epub 2013 Oct 2.

Authors' Affiliations: Departments of Surgery, Pathology, Clinical Sciences, and Pathology, Hamon Center for Therapeutic Oncology Research, UT Southwestern Medical Center; and Department of Molecular and Cell Biology, Center for Systems Biology, The University of Texas, Dallas, Texas.

J Thorac Oncol 2013 Nov;8(11):1378-88

*Hamon Center for Therapeutic Oncology Research and †Division of Biostatistics, University of Texas Southwestern Medical Center, Dallas, Texas; ‡Department of Integrative Oncology, British Columbia Cancer Agency Research Centre, Vancouver, B.C., Canada; §Texas Scottish Rite Hospital for Children, Dallas, Texas; ‖Department of Surgery, Biochemistry, and Molecular Biology, Keck School of Medicine, USC/Norris Comprehensive Cancer Center, Los Angeles, California; ¶Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington; #Oncology Biomarker Development, Genentech Inc., South San Francisco, California; **Department of Molecular and Cell Biology, Center for Systems Biology, University of Texas at Dallas, Dallas, Texas; and ††Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas.

Epigenomics 2013 Jun;5(3):301-16

Department of Molecular & Cell Biology, Center for Systems Biology, The University of Texas at Dallas, Richardson, TX 75080, USA.

PLoS One 2012 29;7(6):e38112. Epub 2012 Jun 29.

Department of Molecular Cell Biology, Center for Systems Biology, University of Texas at Dallas, Richardson, Texas, United States of America.

Environ Toxicol Pharmacol 2012 Sep 19;34(2):381-387. Epub 2012 May 19.

Key Laboratory of Pathobiology, Ministry of Education, Norman Bethune College of Medicine, Jilin University, Changchun 130021, China. Electronic address:

Nucleic Acids Res 2012 Apr 6;40(7):e50. Epub 2012 Jan 6.

Department of Molecular and Cell Biology, Center for Systems Biology, University of Texas at Dallas, 800 W. Campbell Road, Richardson, TX 75080, USA.

BMC Evol Biol 2011 Jun 13;11:161. Epub 2011 Jun 13.

Key Laboratory of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.

BMC Syst Biol 2010 Dec 30;4:179. Epub 2010 Dec 30.

Department of Computer Science and Engineering, Shanghai Jiao Tong University, China.

Biochem Biophys Res Commun 2010 Oct 15;401(1):112-6. Epub 2010 Sep 15.

Department of Computer Science and Engineering, Shanghai Jiao Tong University, Shanghai 200240, China.

PLoS One 2009 Nov 30;4(11):e8086. Epub 2009 Nov 30.

Department of Biological Sciences, University of Southern California, Los Angeles, California, United States of America.

Gene 2009 Mar 7;432(1-2):54-9. Epub 2008 Nov 7.

Shanghai Center for Systems Biomedicine, Key Laboratory of Systems Biomedicine (Ministry of Education), Shanghai Jiao Tong University, Shanghai 200240, China.

BMC Syst Biol 2008 Jun 26;2:54. Epub 2008 Jun 26.

Molecular and Computational Biology Program, Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089-2913, USA.

PLoS One 2008 Apr 9;3(4):e1922. Epub 2008 Apr 9.

Molecular and Computational Biology Program, Department of Biological Sciences, University of Southern California, Los Angeles, California, United States of America.

Bioinformatics 2007 Jan 10;23(2):215-21. Epub 2006 Nov 10.

Molecular and Computational Biology Program, Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089-2910, USA.

Bioinformatics 2006 Nov 23;22(21):2650-7. Epub 2006 Aug 23.

Molecular and Computational Biology Program, Department of Biological Sciences, Computational Biology, University of Southern California Los Angeles, CA, USA.

J Biomed Inform 2006 Aug 22. Epub 2006 Aug 22.

Program in Molecular and Computational Biology, University of Southern California, Los Angeles, CA 90089, USA.

Biochem Biophys Res Commun 2004 Jan;313(1):135-41

Laboratory of Medical Immunology, School of Basic Medical Science, Peking University, 38 Xueyuan Road, Beijing 100083, PR China.