Publications by authors named "Wietse de Boer"

78 Publications

Comparative Studies on the Disease Prevalence and Population Dynamics of Ginger Blotch and Brown Blotch Pathogens of Button Mushrooms.

Authors:
Tanvi Taparia Ed Hendrix Marc Hendriks Marjon Krijger Wietse de Boer Jan van der Wolf

Plant Dis 2021 Jan 15:PDIS06201260RE. Epub 2021 Jan 15.

Biointeractions and Plant Health, Wageningen University and Research, Wageningen 6708PB, The Netherlands.

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January 2021

Atypical Spirotetronate Polyketides Identified in the Underexplored Genus .

Authors:
Somayah S Elsayed Grégory Genta-Jouve Víctor J Carrión Peter H Nibbering Maxime A Siegler Wietse de Boer Thomas Hankemeier Gilles P van Wezel

J Org Chem 2020 08 31;85(16):10648-10657. Epub 2020 Jul 31.

Department of Molecular Biotechnology, Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE Leiden, The Netherlands.

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August 2020

DiSCount: computer vision for automated quantification of seed germination.

Authors:
Raul Masteling Lodewijk Voorhoeve Joris IJsselmuiden Francisco Dini-Andreote Wietse de Boer Jos M Raaijmakers

Plant Methods 2020 1;16:60. Epub 2020 May 1.

1Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO BOX 50, 6708 PB Wageningen, The Netherlands.

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May 2020

Editorial: special issue on the ecology of soil microorganisms.

Authors:
Taina Pennanen Hannu Fritze Wietse de Boer Petr Baldrian

FEMS Microbiol Ecol 2019 12;95(12)

The Czech Academy of Sciences, Prague.

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December 2019

Harnessing the microbiome to control plant parasitic weeds.

Authors:
Raul Masteling Lorenzo Lombard Wietse de Boer Jos M Raaijmakers Francisco Dini-Andreote

Curr Opin Microbiol 2019 06 23;49:26-33. Epub 2019 Oct 23.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands; Department of Plant Science, The Pennsylvania State University, University Park, PA, USA; Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, USA.

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June 2019

Volatile-mediated antagonism of soil bacterial communities against fungi.

Authors:
Xiaogang Li Paolina Garbeva Xiaojiao Liu Paulien J A Klein Gunnewiek Anna Clocchiatti Maria P J Hundscheid Xingxiang Wang Wietse de Boer

Environ Microbiol 2020 03 4;22(3):1025-1035. Epub 2019 Nov 4.

Department of Microbial Ecology, Netherlands Institute of Ecology, NIOO-KNAW, Wageningen, 6708 PB, The Netherlands.

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March 2020

Pathogen suppression by microbial volatile organic compounds in soils.

Authors:
Wietse de Boer Xiaogang Li Annelein Meisner Paolina Garbeva

FEMS Microbiol Ecol 2019 08;95(8)

Department of Microbial Ecology, Netherlands Institute of Ecology, NIOO-KNAW, Droevendaalsesteeg 10, 6708PB Wageningen, The Netherlands.

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August 2019

Effect of the amount of organic trigger compounds, nitrogen and soil microbial biomass on the magnitude of priming of soil organic matter.

Authors:
Domenico Paolo Di Lonardo Wietse de Boer Hans Zweers Annemieke van der Wal

PLoS One 2019 16;14(5):e0216730. Epub 2019 May 16.

National Institute for Public Health and the Environment, Bilthoven, The Netherlands.

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January 2020

Biological activities associated with the volatile compound 2,5-bis(1-methylethyl)-pyrazine.

Authors:
Thierry K S Janssens Olaf Tyc Harrie Besselink Wietse de Boer Paolina Garbeva

FEMS Microbiol Lett 2019 02;366(3)

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO BOX 50, 6700 AB Wageningen, the Netherlands.

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February 2019

Strategies to Maintain Natural Biocontrol of Soil-Borne Crop Diseases During Severe Drought and Rainfall Events.

Authors:
Annelein Meisner Wietse de Boer

Front Microbiol 2018 2;9:2279. Epub 2018 Nov 2.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands.

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November 2018

Legacy of land use history determines reprogramming of plant physiology by soil microbiome.

Authors:
Xiaogang Li Alexandre Jousset Wietse de Boer Víctor J Carrión Taolin Zhang Xingxiang Wang Eiko E Kuramae

ISME J 2019 03 27;13(3):738-751. Epub 2018 Oct 27.

Department of Microbial Ecology, Netherlands Institute of Ecology, NIOO-KNAW, Wageningen, 6708 PB, The Netherlands.

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March 2019

Calling from distance: attraction of soil bacteria by plant root volatiles.

Authors:
Kristin Schulz-Bohm Saskia Gerards Maria Hundscheid Jasper Melenhorst Wietse de Boer Paolina Garbeva

ISME J 2018 05 22;12(5):1252-1262. Epub 2018 Jan 22.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), 6700 AB, Wageningen, The Netherlands.

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May 2018

Priorities for research in soil ecology.

Authors:
Nico Eisenhauer Pedro M Antunes Alison E Bennett Klaus Birkhofer Andrew Bissett Matthew A Bowker Tancredi Caruso Baodong Chen David C Coleman Wietse de Boer Peter de Ruiter Thomas H DeLuca Francesco Frati Bryan S Griffiths Miranda M Hart Stephan Hättenschwiler Jari Haimi Michael Heethoff Nobuhiro Kaneko Laura C Kelly Hans Petter Leinaas Zoë Lindo Catriona Macdonald Matthias C Rillig Liliane Ruess Stefan Scheu Olaf Schmidt Timothy R Seastedt Nico M van Straalen Alexei V Tiunov Martin Zimmer Jeff R Powell

Pedobiologia (Jena) 2017 Jul;63:1-7

Hawkesbury Institute for the Environment, Western Sydney University, Locked Bag 1797, Penrith NSW 2751, Australia.

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July 2017

Changing soil legacies to direct restoration of plant communities.

Authors:
E Pernilla Brinkman Ciska E Raaijmakers Wietse de Boer Wim H van der Putten

AoB Plants 2017 Sep 23;9(5):plx038. Epub 2017 Aug 23.

Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands.

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September 2017

Shifts in rhizosphere fungal community during secondary succession following abandonment from agriculture.

Authors:
S Emilia Hannula Elly Morriën Mattias de Hollander Wim H van der Putten Johannes A van Veen Wietse de Boer

ISME J 2017 10 6;11(10):2294-2304. Epub 2017 Jun 6.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands.

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October 2017

Exploring bacterial interspecific interactions for discovery of novel antimicrobial compounds.

Authors:
Olaf Tyc Victor C L de Jager Marlies van den Berg Saskia Gerards Thierry K S Janssens Niels Zaagman Marco Kai Ales Svatos Hans Zweers Cornelis Hordijk Harrie Besselink Wietse de Boer Paolina Garbeva

Microb Biotechnol 2017 07 29;10(4):910-925. Epub 2017 May 29.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO BOX 50, 6700 AB, Wageningen, The Netherlands.

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July 2017

Upscaling of fungal-bacterial interactions: from the lab to the field.

Authors:
Wietse de Boer

Curr Opin Microbiol 2017 Jun 22;37:35-41. Epub 2017 Apr 22.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, The Netherlands; Department of Soil Quality, Wageningen University, Wageningen, The Netherlands. Electronic address:

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June 2017

Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C.

Authors:
Ruth Schmidt Victor de Jager Daniela Zühlke Christian Wolff Jörg Bernhardt Katarina Cankar Jules Beekwilder Wilfred van Ijcken Frank Sleutels Wietse de Boer Katharina Riedel Paolina Garbeva

Sci Rep 2017 04 13;7(1):862. Epub 2017 Apr 13.

Netherlands Institute of Ecology (NIOO-KNAW), Department of Microbial Ecology, 6700 AB, Wageningen, The Netherlands.

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April 2017

Soil networks become more connected and take up more carbon as nature restoration progresses.

Authors:
Elly Morriën S Emilia Hannula L Basten Snoek Nico R Helmsing Hans Zweers Mattias de Hollander Raquel Luján Soto Marie-Lara Bouffaud Marc Buée Wim Dimmers Henk Duyts Stefan Geisen Mariangela Girlanda Rob I Griffiths Helene-Bracht Jørgensen John Jensen Pierre Plassart Dirk Redecker Rűdiger M Schmelz Olaf Schmidt Bruce C Thomson Emilie Tisserant Stephane Uroz Anne Winding Mark J Bailey Michael Bonkowski Jack H Faber Francis Martin Philippe Lemanceau Wietse de Boer Johannes A van Veen Wim H van der Putten

Nat Commun 2017 02 8;8:14349. Epub 2017 Feb 8.

NIOO-KNAW, Terrestrial Ecology, Droevendaalsesteeg 10, Wageningen 6708 PB, The Netherlands.

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February 2017

The prey's scent - Volatile organic compound mediated interactions between soil bacteria and their protist predators.

Authors:
Kristin Schulz-Bohm Stefan Geisen E R Jasper Wubs Chunxu Song Wietse de Boer Paolina Garbeva

ISME J 2017 03 2;11(3):817-820. Epub 2016 Dec 2.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands.

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March 2017

Low abundant soil bacteria can be metabolically versatile and fast growing.

Authors:
Viola Kurm Wim H van der Putten Wietse de Boer Suzanne Naus-Wiezer W H Gera Hol

Ecology 2017 Feb;98(2):555-564

Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB, Wageningen, The Netherlands.

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February 2017

Fungus-associated bacteriome in charge of their host behavior.

Authors:
Kristin Schulz-Bohm Olaf Tyc Wietse de Boer Nils Peereboom Fons Debets Niels Zaagman Thierry K S Janssens Paolina Garbeva

Fungal Genet Biol 2017 05 30;102:38-48. Epub 2016 Jul 30.

Department Microbial Ecology, Netherlands Institute of Ecology, NIOO-KNAW, PO Box 50, 6700 AB Wageningen, Netherlands. Electronic address:

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May 2017

Controlling the Microbiome: Microhabitat Adjustments for Successful Biocontrol Strategies in Soil and Human Gut.

Authors:
Eveline Adam Anneloes E Groenenboom Viola Kurm Magdalena Rajewska Ruth Schmidt Olaf Tyc Simone Weidner Gabriele Berg Wietse de Boer Joana Falcão Salles

Front Microbiol 2016 13;7:1079. Epub 2016 Jul 13.

Institute of Evolutionary Life sciences, Groningen University Groningen, Netherlands.

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July 2016

Trait Differentiation within the Fungus-Feeding (Mycophagous) Bacterial Genus Collimonas.

Authors:
Max-Bernhard Ballhausen Peter Vandamme Wietse de Boer

PLoS One 2016 16;11(6):e0157552. Epub 2016 Jun 16.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, the Netherlands.

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July 2017

Microbial Small Talk: Volatiles in Fungal-Bacterial Interactions.

Authors:
Ruth Schmidt Desalegn W Etalo Victor de Jager Saskia Gerards Hans Zweers Wietse de Boer Paolina Garbeva

Front Microbiol 2015 5;6:1495. Epub 2016 Jan 5.

Department of Microbial Ecology, Netherlands Institute of Ecology Wageningen, Netherlands.

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January 2016

Methods for Baiting and Enriching Fungus-Feeding (Mycophagous) Rhizosphere Bacteria.

Authors:
Max-Bernhard Ballhausen Johannes A van Veen Maria P J Hundscheid Wietse de Boer

Front Microbiol 2015 22;6:1416. Epub 2015 Dec 22.

Department of Microbial Ecology, Netherlands Institute of EcologyWageningen, Netherlands; Department of Soil Quality, Wageningen UniversityWageningen, Netherlands.

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January 2016

Volatiles in Inter-Specific Bacterial Interactions.

Authors:
Olaf Tyc Hans Zweers Wietse de Boer Paolina Garbeva

Front Microbiol 2015 18;6:1412. Epub 2015 Dec 18.

Department of Microbial Ecology, Netherlands Institute of Ecology Wageningen, Netherlands.

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January 2016

Exploring the genomic traits of fungus-feeding bacterial genus Collimonas.

Authors:
Chunxu Song Ruth Schmidt Victor de Jager Dorota Krzyzanowska Esmer Jongedijk Katarina Cankar Jules Beekwilder Anouk van Veen Wietse de Boer Johannes A van Veen Paolina Garbeva

BMC Genomics 2015 Dec 24;16:1103. Epub 2015 Dec 24.

Netherlands Institute of Ecology, Department of Microbial Ecology, Droevendaalsesteeg 10, Wageningen, 6708 PB, The Netherlands.

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December 2015

A fragrant neighborhood: volatile mediated bacterial interactions in soil.

Authors:
Kristin Schulz-Bohm Hans Zweers Wietse de Boer Paolina Garbeva

Front Microbiol 2015 3;6:1212. Epub 2015 Nov 3.

Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW) Wageningen, Netherlands.

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November 2015

Non-random species loss in bacterial communities reduces antifungal volatile production.

Authors:
W H Gera Hol Paolina Garbeva Cornelis Hordijk P J Hundscheid Paulien J A Klein Gunnewiek Maaike Van Agtmaal Eiko E Kuramae Wietse De Boer

Ecology 2015 Aug;96(8):2042-8

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August 2015