Publications by authors named "Vladimir Trifonov"

100Publications

Chromosome Distribution of Highly Conserved Tandemly Arranged Repetitive DNAs in the Siberian Sturgeon ().

Genes (Basel) 2020 Nov 20;11(11). Epub 2020 Nov 20.

Institute of Molecular and Cellular Biology SB RAS, Lavrentiev Ave., 8/2, 630090 Novosibirsk, Russia.

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http://dx.doi.org/10.3390/genes11111375DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7699875PMC
November 2020

High genetic diversity of ancient horses from the Ukok Plateau.

PLoS One 2020 12;15(11):e0241997. Epub 2020 Nov 12.

Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, Novosibirsk Oblast, Russia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0241997PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7660532PMC
November 2020

Addressing Long-Standing Questions with Advanced Approaches: The 4th B Chromosome Conference.

Cytogenet Genome Res 2020 7;160(3):111-117. Epub 2020 Mar 7.

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http://dx.doi.org/10.1159/000506695DOI Listing
June 2020

Poly(ADP-ribosyl)ation and DNA repair synthesis in the extracts of naked mole rat, mouse, and human cells.

Aging (Albany NY) 2019 05;11(9):2852-2873

Institute of Chemical Biology and Fundamental Medicine, Siberian Branch of the Russian Academy of Sciences, Novosibirsk 630090, Russia.

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http://dx.doi.org/10.18632/aging.101959DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6535076PMC
May 2019

Evolution, Composition and Regulation of Supernumerary B Chromosomes.

Genes (Basel) 2019 02 20;10(2). Epub 2019 Feb 20.

Laboratory of Comparative Genomics, Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, Novosibirsk 630090, Russia.

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http://dx.doi.org/10.3390/genes10020161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409906PMC
February 2019

First report on B chromosome content in a reptilian species: the case of Anolis carolinensis.

Mol Genet Genomics 2019 Feb 27;294(1):13-21. Epub 2018 Aug 27.

Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia.

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http://dx.doi.org/10.1007/s00438-018-1483-9DOI Listing
February 2019

Low-pass single-chromosome sequencing of human small supernumerary marker chromosomes (sSMCs) and Apodemus B chromosomes.

Chromosoma 2018 09 30;127(3):301-311. Epub 2018 Jan 30.

Institute of Molecular and Cellular Biology Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.

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http://dx.doi.org/10.1007/s00412-018-0662-0DOI Listing
September 2018

Immunocytological analysis of meiotic recombination in two anole lizards (Squamata, Dactyloidae).

Comp Cytogenet 2017 6;11(1):129-141. Epub 2017 Mar 6.

Institute of Cytology and Genetics, Russian Academy of Sciences, Siberian Branch, Novosibirsk 630090, Russia.

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http://dx.doi.org/10.3897/CompCytogen.v11i1.10916DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5599703PMC
March 2017

Heteromorphism of "Homomorphic" Sex Chromosomes in Two Anole Species (Squamata, Dactyloidae) Revealed by Synaptonemal Complex Analysis.

Cytogenet Genome Res 2017 18;151(2):89-95. Epub 2017 Mar 18.

Institute of Cytology and Genetics, Russian Academy of Sciences, Siberian Branch, Novosibirsk, Russia.

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http://dx.doi.org/10.1159/000460829DOI Listing
September 2017

Cytogenetic Insights into the Evolution of Chromosomes and Sex Determination Reveal Striking Homology of Turtle Sex Chromosomes to Amphibian Autosomes.

Cytogenet Genome Res 2016 16;148(4):292-304. Epub 2016 Jul 16.

Department of Ecology, Evolution and Organismal Biology, Iowa State University, Ames, Iowa, USA.

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http://dx.doi.org/10.1159/000447478DOI Listing
January 2017

Evolutionary plasticity of acipenseriform genomes.

Chromosoma 2016 09 14;125(4):661-8. Epub 2016 Jul 14.

Institute of Molecular and Cellular Biology SB RAS, Lavrentiev ave 8/2, 630090, Novosibirsk, Russia.

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http://dx.doi.org/10.1007/s00412-016-0609-2DOI Listing
September 2016

Evidence for Sex Chromosome Turnover in Proteid Salamanders.

Cytogenet Genome Res 2016 29;148(4):305-13. Epub 2016 Jun 29.

Department of Biology, Hartwick College, Oneonta, N.Y., USA.

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http://dx.doi.org/10.1159/000446882DOI Listing
January 2017

Low rate of interchromosomal rearrangements during old radiation of gekkotan lizards (Squamata: Gekkota).

Chromosome Res 2015 Jun 11;23(2):299-309. Epub 2015 Feb 11.

Department of Ecology, Faculty of Science, Charles University in Prague, Viničná 7, Praha 2, Czech Republic.

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http://link.springer.com/content/pdf/10.1007/s10577-015-9468
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http://link.springer.com/10.1007/s10577-015-9468-6
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http://dx.doi.org/10.1007/s10577-015-9468-6DOI Listing
June 2015

A cytogenetic and comparative map of camelid chromosome 36 and the minute in alpacas.

Chromosome Res 2015 Jun 30;23(2):237-51. Epub 2015 Jan 30.

Department of Veterinary Integrative Biosciences, College of Veterinary Medicine and Biomedical Sciences, Texas A&M University, College Station, TX, 77843-4458, USA.

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http://dx.doi.org/10.1007/s10577-014-9463-3DOI Listing
June 2015

Genes on B chromosomes of vertebrates.

Mol Cytogenet 2014 17;7(1):99. Epub 2014 Dec 17.

Institute of Molecular and Cellular Biology SВ RAS, Novosibirsk, 630090 Russia ; Novosibirsk State University, Novosibirsk, Russia.

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http://dx.doi.org/10.1186/s13039-014-0099-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4274688PMC
December 2014

Genetics of follicular lymphoma transformation.

Cell Rep 2014 Jan 2;6(1):130-40. Epub 2014 Jan 2.

Institute for Cancer Genetics, Columbia University, New York, NY 10032, USA; Herbert Irving Comprehensive Cancer Center, Columbia University, New York, NY 10032, USA; Department of Pathology & Cell Biology, Columbia University, New York, NY 10032, USA; Department of Genetics & Development, Columbia University, New York, NY 10032, USA; Department of Microbiology & Immunology, Columbia University, New York, NY 10032, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2013.12.027DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4100800PMC
January 2014

Comparative analysis of sex chromosomes in Leporinus species (Teleostei, Characiformes) using chromosome painting.

BMC Genet 2013 Jul 3;14:60. Epub 2013 Jul 3.

Departamento de Biologia, Laboratório de Citogenética, Instituto de Biociências, Universidade Estadual Paulista Julio de Mesquita Filho - UNESP, Rio Claro, Av. 24A, 1515, CEP 13506-900 Rio Claro, SP, Brazil.

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http://dx.doi.org/10.1186/1471-2156-14-60DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3708793PMC
July 2013

Ancient DNA analysis affirms the canid from Altai as a primitive dog.

PLoS One 2013 6;8(3):e57754. Epub 2013 Mar 6.

Department of Genomic Diversity and Evolution, Institute of Molecular and Cellular Biology, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0057754PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3590291PMC
September 2013

Generation of multicolor banding probes for chromosomes of different species.

Mol Cytogenet 2013 Feb 4;6(1). Epub 2013 Feb 4.

Jena University Hospital, Friedrich Schiller University, Institute of Human Genetics, Kollegiengasse 10, Jena, D-07743, Germany.

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http://dx.doi.org/10.1186/1755-8166-6-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3575270PMC
February 2013

First molecular cytogenetic high resolution characterization of the NIH 3T3 cell line by murine multicolor banding.

J Histochem Cytochem 2013 Apr 15;61(4):306-12. Epub 2013 Jan 15.

Institute of Human Genetics, Jena University Hospital, Friedrich Schiller University, Jena, Germany.

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http://dx.doi.org/10.1369/0022155413476868DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3621507PMC
April 2013

Fractal-like distributions over the rational numbers in high-throughput biological and clinical data.

Sci Rep 2011 13;1:191. Epub 2011 Dec 13.

Department of Biomedical Informatics, Center for Computational Biology and Bioinformatics, Columbia University, New York, NY 10032, USA.

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http://dx.doi.org/10.1038/srep00191DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3240948PMC
September 2013

The genome diversity and karyotype evolution of mammals.

Mol Cytogenet 2011 Oct 12;4:22. Epub 2011 Oct 12.

Institute of Molecular and Cellular Biology SB RAS, Novosibirsk, 630090, Russia.

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http://dx.doi.org/10.1186/1755-8166-4-22DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3204295PMC
October 2011

Anchoring the dog to its relatives reveals new evolutionary breakpoints across 11 species of the Canidae and provides new clues for the role of B chromosomes.

Chromosome Res 2011 Aug 27;19(6):685-708. Epub 2011 Sep 27.

Department of Molecular Biomedical Sciences, College of Veterinary Medicine, North Carolina State University, 1060 William Moore Drive, Raleigh, NC 27607, USA.

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http://link.springer.com/10.1007/s10577-011-9233-4
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http://dx.doi.org/10.1007/s10577-011-9233-4DOI Listing
August 2011

Whole chromosome painting reveals independent origin of sex chromosomes in closely related forms of a fish species.

Genetica 2011 Aug 17;139(8):1065-72. Epub 2011 Sep 17.

Departamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, SP, Brazil.

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http://dx.doi.org/10.1007/s10709-011-9610-0DOI Listing
August 2011

Chromosome painting in Tragulidae facilitates the reconstruction of Ruminantia ancestral karyotype.

Chromosome Res 2011 May 29;19(4):531-9. Epub 2011 Mar 29.

Molecular and Cellular Biology Department, Institute of Chemical Biology and Fundamental Medicine, SB RAS, 630090, Novosibirsk, Russia.

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http://dx.doi.org/10.1007/s10577-011-9201-zDOI Listing
May 2011

Frequency analysis techniques for identification of viral genetic data.

mBio 2010 Aug 24;1(3). Epub 2010 Aug 24.

Department of Biomedical Informatics, College of Physicians and Surgeons, Columbia University, New York, New York, USA.

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http://dx.doi.org/10.1128/mBio.00156-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2932508PMC
August 2010

New insights into the karyotypic evolution in muroid rodents revealed by multicolor banding applying murine probes.

Chromosome Res 2010 Feb 2;18(2):265-75. Epub 2010 Feb 2.

Molecular and Cellular Biology Department, Institute of Chemical Biology and Fundamental Medicine, Scapital VE, Cyrillic RAS, Novosibirsk, Russia.

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http://dx.doi.org/10.1007/s10577-010-9110-6DOI Listing
February 2010

Reassortment patterns in Swine influenza viruses.

PLoS Curr 2009 Aug 21;1:RRN1008. Epub 2009 Aug 21.

Columbia University.

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http://dx.doi.org/10.1371/currents.RRN1008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2762698PMC
August 2009

Reassortment patterns in Swine influenza viruses.

PLoS One 2009 Oct 7;4(10):e7366. Epub 2009 Oct 7.

Department of Biomedical Informatics and Center for Computational Biology and Bioinformatics, Columbia University College of Physicians and Surgeons, New York, New York, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0007366PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2752997PMC
October 2009

Geographic dependence, surveillance, and origins of the 2009 influenza A (H1N1) virus.

N Engl J Med 2009 Jul 27;361(2):115-9. Epub 2009 May 27.

Department of Biomedical Informatics, Center for Computational Biology and Bioinformatics, Columbia University College of Physicians and Surgeons, New York, USA.

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http://www.nejm.org/doi/abs/10.1056/NEJMp0904572
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http://dx.doi.org/10.1056/NEJMp0904572DOI Listing
July 2009

Characterizing the chromosomes of the platypus (Ornithorhynchus anatinus).

Chromosome Res 2007 9;15(8):961-74. Epub 2008 Jan 9.

Comparative Genomics Group, Research School of Biological Sciences, The Australian National University, Canberra, ACT 2601, Australia.

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http://dx.doi.org/10.1007/s10577-007-1186-2DOI Listing
April 2008

Mammalian karyotype evolution.

Nat Rev Genet 2007 Dec;8(12):950-62

Cambridge Resource Centre for Comparative Genomics, Cambridge University Department of Veterinary Medicine, Madingley Road, Cambridge CB3 0ES, UK.

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http://dx.doi.org/10.1038/nrg2199DOI Listing
December 2007

Search for the sex-determining switch in monotremes: mapping WT1, SF1, LHX1, LHX2, FGF9, WNT4, RSPO1 and GATA4 in platypus.

Chromosome Res 2007 29;15(6):777-85. Epub 2007 Aug 29.

Cambridge Resource Centre for Comparative Genomics, Department of Veterinary Medicine, University of Cambridge, Cambridge, CB3 OES, UK.

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http://dx.doi.org/10.1007/s10577-007-1161-yDOI Listing
December 2007

Reciprocal chromosome painting between three laboratory rodent species.

Mamm Genome 2006 Dec 1;17(12):1183-92. Epub 2006 Dec 1.

Institute of Cytology and Genetics, Siberian Branch, Russian Academy of Sciences, Novosibirsk, 630090, Russia.

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http://dx.doi.org/10.1007/s00335-006-0081-zDOI Listing
December 2006

Microdissection-derived murine mcb probes from somatic cell hybrids.

J Histochem Cytochem 2005 Jun;53(6):791-2

Institut für Human Genetics and Anthropology, Postfach, D-07740 Jena, Germany.

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http://dx.doi.org/10.1369/jhc.4B6598.2005DOI Listing
June 2005