Vivekananda Shetty

Vivekananda Shetty

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Vivekananda Shetty

Vivekananda Shetty

Publications by authors named "Vivekananda Shetty"

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26Publications

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Sphingosine kinase 1-associated autophagy differs between neurons and astrocytes.

Cell Death Dis 2018 05 1;9(5):521. Epub 2018 May 1.

Department of Neurobiology and Anatomy, The University of Texas McGovern Medical School, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1038/s41419-018-0599-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5943283PMC
May 2018

Identification and Quantitation of Malonic Acid Biomarkers of In-Born Error Metabolism by Targeted Metabolomics.

J Am Soc Mass Spectrom 2017 05 17;28(5):929-938. Epub 2017 Mar 17.

Metabolomics Core Facility, Molecular and Cellular Biology, Alkek Center for Molecular Discovery, Baylor College of Medicine, Houston, TX, 77030, USA.

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http://dx.doi.org/10.1007/s13361-017-1631-1DOI Listing
May 2017

Global metabolomic analysis of a mammalian host infected with Bacillus anthracis.

Infect Immun 2015 Dec 5;83(12):4811-25. Epub 2015 Oct 5.

Department of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, Texas, USA

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http://dx.doi.org/10.1128/IAI.00947-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4645395PMC
December 2015

Unique and differential protein signatures within the mononuclear cells of HIV-1 and HCV mono-infected and co-infected patients.

Clin Proteomics 2012 Sep 7;9(1):11. Epub 2012 Sep 7.

Department of Microbiology and Immunology, and the Drexel Institute for Biotechnology and Virology Research, Drexel University College of Medicine, 3805 Old Easton Road, Doylestown, PA, USA.

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http://dx.doi.org/10.1186/1559-0275-9-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3582525PMC
September 2012

Investigation of ovarian cancer associated sialylation changes in N-linked glycopeptides by quantitative proteomics.

Clin Proteomics 2012 Aug 2;9(1):10. Epub 2012 Aug 2.

Immunotope, Inc,, 3805 Old Easton Road, Doylestown, PA, 18902, USA.

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http://dx.doi.org/10.1186/1559-0275-9-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3488482PMC
August 2012

Quantitative immunoproteomics analysis reveals novel MHC class I presented peptides in cisplatin-resistant ovarian cancer cells.

J Proteomics 2012 Jun 3;75(11):3270-90. Epub 2012 Apr 3.

Immunotope, Inc., 3805 Old Easton Road, Doylestown, PA 18902, United States.

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http://dx.doi.org/10.1016/j.jprot.2012.03.044DOI Listing
June 2012

Investigation of sialylation aberration in N-linked glycopeptides by lectin and tandem labeling (LTL) quantitative proteomics.

Anal Chem 2010 Nov 5;82(22):9201-10. Epub 2010 Oct 5.

Immunotope, Inc., 3805 Old Easton Road, Doylestown, Pennsylvania 18902, USA.

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http://dx.doi.org/10.1021/ac101486dDOI Listing
November 2010

Characterization of novel oxidation products of cysteine in an active site motif peptide of PTP1B.

J Am Soc Mass Spectrom 2009 Aug 4;20(8):1540-8. Epub 2009 May 4.

Kimmel Center for Biology and Medicine at the Skirball Institute and Department of Pharmacology, New York University School of Medicine, New York, New York 10016, USA.

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http://dx.doi.org/10.1016/j.jasms.2009.04.011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2734337PMC
August 2009

Human Proteinpedia enables sharing of human protein data.

Authors:
Suresh Mathivanan Mukhtar Ahmed Natalie G Ahn Hainard Alexandre Ramars Amanchy Philip C Andrews Joel S Bader Brian M Balgley Marcus Bantscheff Keiryn L Bennett Erik Björling Blagoy Blagoev Ron Bose Samir K Brahmachari Alma S Burlingame Xosé R Bustelo Gerard Cagney Greg T Cantin Helene L Cardasis Julio E Celis Raghothama Chaerkady Feixia Chu Philip A Cole Catherine E Costello Robert J Cotter David Crockett James P DeLany Angelo M De Marzo Leroi V DeSouza Eric W Deutsch Eric Dransfield Gerard Drewes Arnaud Droit Michael J Dunn Kojo Elenitoba-Johnson Rob M Ewing Jennifer Van Eyk Vitor Faca Jayson Falkner Xiangming Fang Catherine Fenselau Daniel Figeys Pierre Gagné Cecilia Gelfi Kris Gevaert Jeffrey M Gimble Florian Gnad Renu Goel Pavel Gromov Samir M Hanash William S Hancock H C Harsha Gerald Hart Faith Hays Fuchu He Prashantha Hebbar Kenny Helsens Heiko Hermeking Winston Hide Karin Hjernø Denis F Hochstrasser Oliver Hofmann David M Horn Ralph H Hruban Nieves Ibarrola Peter James Ole N Jensen Pia Hønnerup Jensen Peter Jung Kumaran Kandasamy Indu Kheterpal Reiko F Kikuno Ulrike Korf Roman Körner Bernhard Kuster Min-Seok Kwon Hyoung-Joo Lee Young-Jin Lee Michael Lefevre Minna Lehvaslaiho Pierre Lescuyer Fredrik Levander Megan S Lim Christian Löbke Joseph A Loo Matthias Mann Lennart Martens Juan Martinez-Heredia Mark McComb James McRedmond Alexander Mehrle Rajasree Menon Christine A Miller Harald Mischak S Sujatha Mohan Riaz Mohmood Henrik Molina Michael F Moran James D Morgan Robert Moritz Martine Morzel David C Muddiman Anuradha Nalli J Daniel Navarro Thomas A Neubert Osamu Ohara Rafael Oliva Gilbert S Omenn Masaaki Oyama Young-Ki Paik Kyla Pennington Rainer Pepperkok Balamurugan Periaswamy Emanuel F Petricoin Guy G Poirier T S Keshava Prasad Samuel O Purvine B Abdul Rahiman Prasanna Ramachandran Y L Ramachandra Robert H Rice Jens Rick Ragna H Ronnholm Johanna Salonen Jean-Charles Sanchez Thierry Sayd Beerelli Seshi Kripa Shankari Shi Jun Sheng Vivekananda Shetty K Shivakumar Richard J Simpson Ravi Sirdeshmukh K W Michael Siu Jeffrey C Smith Richard D Smith David J States Sumio Sugano Matthew Sullivan Giulio Superti-Furga Maarit Takatalo Visith Thongboonkerd Jonathan C Trinidad Mathias Uhlen Joël Vandekerckhove Julian Vasilescu Timothy D Veenstra José-Manuel Vidal-Taboada Mauno Vihinen Robin Wait Xiaoyue Wang Stefan Wiemann Billy Wu Tao Xu John R Yates Jun Zhong Ming Zhou Yunping Zhu Petra Zurbig Akhilesh Pandey

Nat Biotechnol 2008 Feb;26(2):164-7

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http://dx.doi.org/10.1038/nbt0208-164DOI Listing
February 2008

Characterization by tandem mass spectrometry of stable cysteine sulfenic acid in a cysteine switch peptide of matrix metalloproteinases.

J Am Soc Mass Spectrom 2007 Aug 24;18(8):1544-51. Epub 2007 May 24.

Skirball Institute of Biomolecular Medicine and Department of Pharmacology, New York University School of Medicine, New York, New York 10016, USA.

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http://dx.doi.org/10.1016/j.jasms.2007.05.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1994715PMC
August 2007

Proteomic analysis of exfoliation deposits.

Invest Ophthalmol Vis Sci 2007 Apr;48(4):1447-57

Department of Ophthalmology, New York Eye and Ear Infirmary, New York, NY, USA.

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http://dx.doi.org/10.1167/iovs.06-0411DOI Listing
April 2007

Fragmentation of protonated ions of peptides containing cysteine, cysteine sulfinic acid, and cysteine sulfonic acid.

J Am Soc Mass Spectrom 2004 May;15(5):697-702

Department of Chemistry, University of California at Riveirside, Riverside, California 92521-0403, USA.

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http://dx.doi.org/10.1016/j.jasms.2004.01.005DOI Listing
May 2004

Lactone enols are stable in the gas phase but highly unstable in solution.

J Am Chem Soc 2002 Nov;124(44):13282-9

Department of Chemistry, Bagley Hall, Box 351700, University of Washington, Seattle, Washington 98195-1700, USA.

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http://dx.doi.org/10.1021/ja0202457DOI Listing
November 2002

Fragmentation of deprotonated ions of oligodeoxynucleotides carrying a 5-formyluracil or 2-aminoimidazolone.

J Am Soc Mass Spectrom 2002 Oct;13(10):1190-4

Department of Chemistry, University of California at Riverside, 92521-0403, USA.

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http://dx.doi.org/10.1016/S1044-0305(02)00452-XDOI Listing
October 2002

ESI-MS/MS for the differentiation of diastereomeric pyrimidine glycols in mononucleosides.

Anal Chem 2002 Sep;74(17):4505-12

Department of Chemistry, University of California at Riverside, 92521-0403, USA.

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http://dx.doi.org/10.1021/ac025602aDOI Listing
September 2002

Lactone enol cation-radicals: gas-phase generation, structure, energetics, and reactivity of the ionized enol of butane-4-lactone.

J Mass Spectrom 2002 Aug;37(8):829-39

Department of Chemistry, Bagley Hall, Box 351700, University of Washington, Seattle, Washington 98195-1700, USA.

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http://dx.doi.org/10.1002/jms.342DOI Listing
August 2002