Publications by authors named "Vasavi Sundaram"

13Publications

Transposable elements as a potent source of diverse -regulatory sequences in mammalian genomes.

Philos Trans R Soc Lond B Biol Sci 2020 03 10;375(1795):20190347. Epub 2020 Feb 10.

Department of Chemical and Systems Biology, Stanford University School of Medicine, Stanford, USA.

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http://dx.doi.org/10.1098/rstb.2019.0347DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7061989PMC
March 2020

The epigenomic landscape of transposable elements across normal human development and anatomy.

Nat Commun 2019 12 10;10(1):5640. Epub 2019 Dec 10.

Department of Genetics, Washington University School of Medicine, 4515 McKinley Avenue, St. Louis, MO, 63110, USA.

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http://dx.doi.org/10.1038/s41467-019-13555-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6904449PMC
December 2019

Transposable Element Mediated Innovation in Gene Regulatory Landscapes of Cells: Re-Visiting the "Gene-Battery" Model.

Bioessays 2018 Jan 5;40(1). Epub 2017 Dec 5.

Department of Genetics Center for Genome Sciences and Systems Biology Washington University School of Medicine, St Louis, MO, 63110, USA.

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http://dx.doi.org/10.1002/bies.201700155DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5912915PMC
January 2018

Functional cis-regulatory modules encoded by mouse-specific endogenous retrovirus.

Nat Commun 2017 03 28;8:14550. Epub 2017 Mar 28.

Department of Genetics, Center for Genome Sciences and Systems Biology, Washington University School of Medicine, 4515 McKinley Avenue, St. Louis, Missouri 63110, USA.

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http://dx.doi.org/10.1038/ncomms14550DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5379053PMC
March 2017

Widespread contribution of transposable elements to the innovation of gene regulatory networks.

Genome Res 2014 Dec 15;24(12):1963-76. Epub 2014 Oct 15.

Department of Genetics, Center for Genome Sciences and Systems Biology, Washington University School of Medicine, St. Louis, Missouri 63108, USA;

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http://dx.doi.org/10.1101/gr.168872.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4248313PMC
December 2014

Comparative DNA methylome analysis of endometrial carcinoma reveals complex and distinct deregulation of cancer promoters and enhancers.

BMC Genomics 2014 Oct 6;15:868. Epub 2014 Oct 6.

Department of Genetics, Center for Genome Sciences and Systems Biology, Washington University School of Medicine, St, Louis MO 63108, USA.

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http://dx.doi.org/10.1186/1471-2164-15-868DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4198682PMC
October 2014

Recurrent epimutations activate gene body promoters in primary glioblastoma.

Genome Res 2014 May 7;24(5):761-74. Epub 2014 Apr 7.

Brain Tumor Research Center, Department of Neurosurgery, Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, California 94143, USA;

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http://dx.doi.org/10.1101/gr.164707.113DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4009606PMC
May 2014