Tomasz Burzykowski

Tomasz Burzykowski

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Tomasz Burzykowski

Publications by authors named "Tomasz Burzykowski"

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The (generalized) hydrogen rule for organic molecules.

J Mass Spectrom 2019 Dec 8. Epub 2019 Dec 8.

I-BioStat, Data Science Institute, Hasselt University, Belgium.

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http://dx.doi.org/10.1002/jms.4485DOI Listing
December 2019

Visualizing the agreement of peptide assignments between different search engines.

J Mass Spectrom 2019 Nov 12. Epub 2019 Nov 12.

Interuniversity Institute of Biostatistics and Statistical Bioinformatics, Hasselt University, Hasselt, Belgium.

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http://dx.doi.org/10.1002/jms.4471DOI Listing
November 2019

Chronological Trends in Progression-Free, Overall, and Post-Progression Survival in First-Line Therapy for Advanced NSCLC.

J Thorac Oncol 2019 Sep 1;14(9):1619-1627. Epub 2019 Jun 1.

Medical University of Gdańsk, Gdańsk, Poland. Electronic address:

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http://dx.doi.org/10.1016/j.jtho.2019.05.030DOI Listing
September 2019

Experimental Design in Quantitative Proteomics.

Methods Mol Biol 2019 ;1977:181-197

I-BioStat, Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1007/978-1-4939-9232-4_12DOI Listing
August 2019

A Multivariate Negative-Binomial Model with Random Effects for Differential Gene-Expression Analysis of Correlated mRNA Sequencing Data.

J Comput Biol 2019 Jul 17. Epub 2019 Jul 17.

1Interuniversity Institute for Biostatistics and statistical Bioinformatics, Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1089/cmb.2019.0168DOI Listing
July 2019

De novo prediction of the elemental composition of peptides and proteins based on a single mass.

J Mass Spectrom 2019 Apr 29. Epub 2019 Apr 29.

I-BioStat, Hasselt University, Hasselt, Belgium.

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http://dx.doi.org/10.1002/jms.4367DOI Listing
April 2019

A multivariate linear model for investigating the association between gene-module co-expression and a continuous covariate.

Stat Appl Genet Mol Biol 2019 03 15;18(2). Epub 2019 Mar 15.

Hasselt University, I-BioStat, Diepenbeek, Belgium.

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http://dx.doi.org/10.1515/sagmb-2018-0008DOI Listing
March 2019

A Poisson approach to the validation of failure time surrogate endpoints in individual patient data meta-analyses.

Stat Methods Med Res 2019 01 6;28(1):170-183. Epub 2017 Jul 6.

1 Service de Biostatistique et d'Épidémiologie, Institut Gustave Roussy, Université Paris-Saclay, Villejuif, France.

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http://dx.doi.org/10.1177/0962280217718582DOI Listing
January 2019

The search for surrogate endpoints for immunotherapy trials.

Ann Transl Med 2018 Jun;6(11):231

International Drug Development Institute, Louvain-la-Neuve, Belgium.

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http://atm.amegroups.com/article/view/19685/19789
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http://dx.doi.org/10.21037/atm.2018.05.16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6035998PMC
June 2018

Understanding and Communicating Measures of Treatment Effect on Survival: Can We Do Better?

J Natl Cancer Inst 2018 03;110(3):232-240

Interuniversity Institute for Biostatistics and statistical Bioinformatics (I-BioStat), Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1093/jnci/djx179DOI Listing
March 2018

Computational methods and challenges in hydrogen/deuterium exchange mass spectrometry.

Mass Spectrom Rev 2017 09 7;36(5):649-667. Epub 2016 Sep 7.

I-BioStat, Hasselt University, Campus Diepenbeek, Agoralaan Gebouw D, Diepenbeek 3590, Belgium.

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http://dx.doi.org/10.1002/mas.21519DOI Listing
September 2017

Estimation of diagnostic accuracy of a combination of continuous biomarkers allowing for conditional dependence between the biomarkers and the imperfect reference-test.

Biometrics 2017 06 6;73(2):646-655. Epub 2016 Sep 6.

Hasselt University, I-BioStat, Agoralaan, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1111/biom.12583DOI Listing
June 2017

Precision medicine needs randomized clinical trials.

Nat Rev Clin Oncol 2017 05 7;14(5):317-323. Epub 2017 Feb 7.

I-BioStat, Hasselt University, Martelarenlaan 42, 3500 Hasselt, Belgium; and at the IDDI, 185 Alewife Brook Parkway, Suite 410, Cambridge, Massachusetts 02138, USA.

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http://dx.doi.org/10.1038/nrclinonc.2017.8DOI Listing
May 2017

Adoption of Pathologic Complete Response as a Surrogate End Point in Neoadjuvant Trials in HER2-Positive Breast Cancer Still an Open Question.

JAMA Oncol 2017 03;3(3):416

Interuniversity Institute for Biostatistics and Statistical Bioinformatics, Hasselt University, Belgium4International Drug Development Institute, San Francisco, California.

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http://dx.doi.org/10.1001/jamaoncol.2016.3941DOI Listing
March 2017

Adaptive Randomization of Neratinib in Early Breast Cancer.

N Engl J Med 2016 10;375(16):1591-2

International Drug Development Institute, Louvain-la-Neuve, Belgium

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http://dx.doi.org/10.1056/NEJMc1609993DOI Listing
October 2016

Transferring cut-off values between assays for cerebrospinal fluid Alzheimer's disease biomarkers.

J Alzheimers Dis 2016 ;49(1):187-199

Interuniversity Institute for Biostatistics and statistical Bioinformatics (I-BioStat), Hasselt University, Diepenbeek, Belgium.

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http://www.iddi.com/sites/default/files/cutt-off-value_alzhe
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http://dx.doi.org/10.3233/JAD-150511DOI Listing
September 2016

An information-theoretic approach for the evaluation of surrogate endpoints based on causal inference.

Biometrics 2016 09 10;72(3):669-77. Epub 2016 Feb 10.

I-BioStat, Universiteit Hasselt, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1111/biom.12483DOI Listing
September 2016

The Detection of Metabolite-Mediated Gene Module Co-Expression Using Multivariate Linear Models.

PLoS One 2016 26;11(2):e0150257. Epub 2016 Feb 26.

Interuniversity Institute for Biostatistics and Statistical Bioinformatics (I-Biostat), Hasselt University, Diepenbeek, Belgium.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0150257PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4769021PMC
July 2016

Data-driven risk identification in phase III clinical trials using central statistical monitoring.

Int J Clin Oncol 2016 Feb 2;21(1):38-45. Epub 2015 Aug 2.

Interuniversity Institute for Biostatistics and Statistical Bioinformatics, Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1007/s10147-015-0877-5DOI Listing
February 2016

Development of a diagnostic test based on multiple continuous biomarkers with an imperfect reference test.

Stat Med 2016 Feb 21;35(4):595-608. Epub 2015 Sep 21.

Interuniversity Institute for Biostatistics and Statistical Bioinformatics (I-BioStat), Hasselt University, Agoralaan Building D, Diepenbeek, 3590, Belgium.

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http://dx.doi.org/10.1002/sim.6733DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6312185PMC
February 2016

Statistical evaluation of surrogate endpoints with examples from cancer clinical trials.

Biom J 2016 Jan 12;58(1):104-32. Epub 2015 Feb 12.

Interuniversity Institute for Biostatistics and Statistical Bioinformatics (I-BioStat), Hasselt University, Martelarenlaan 42, 3500, Hasselt, Belgium.

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http://dx.doi.org/10.1002/bimj.201400049DOI Listing
January 2016

Neoadjuvant as Future for Drug Development in Breast Cancer--Letter.

Clin Cancer Res 2016 Jan;22(1):268

International Drug Development Institute, Louvain-la-Neuve, Belgium. Dendrix Research, Sao Paulo, Brazil.

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http://dx.doi.org/10.1158/1078-0432.CCR-15-1047DOI Listing
January 2016

Differences in the Elemental Isotope Definition May Lead to Errors in Modern Mass-Spectrometry-Based Proteomics.

Anal Chem 2015 Nov 22;87(21):10747-54. Epub 2015 Oct 22.

Interuniversity Institute of Biostatistics and statistical Bioinformatics, Hasselt University , 3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1021/acs.analchem.5b01165DOI Listing
November 2015

Whole Cell Therapeutic Vaccine Modified With Hyper-IL6 for Combinational Treatment of Nonresected Advanced Melanoma.

Medicine (Baltimore) 2015 May;94(21):e853

From the Chair of Medical Biotechnology, University of Medical Sciences (MJ, LM, KM, WM, MZ, MA); Department of Diagnostics and Cancer Immunology, Greater Poland Cancer Centre (MJ, K-DA, WM, MA); Department of Medical and Experimental Oncology, Clinical Hospital of Poznan University of Medical Sciences, Poznan, Poland (MJ); Interuniversity Institute for Biostatistics and Statistical Bioinformatics, Hasselt University, Diepenbeek, Belgium (BT); Biochemisches Institut, University Kiel, Kiel, Germany (R-JS); and BioContract Sp z o.o., Poznan, Poland (LM, KM, MA).

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http://dx.doi.org/10.1097/MD.0000000000000853DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4616404PMC
May 2015

Radiographic progression-free survival as a response biomarker in metastatic castration-resistant prostate cancer: COU-AA-302 results.

J Clin Oncol 2015 Apr 26;33(12):1356-63. Epub 2015 Jan 26.

Michael J. Morris, Steven M. Larson, and Howard I. Scher, Memorial Sloan Kettering Cancer Center and Weill Cornell Medical College, New York, NY; Arturo Molina, Thian Kheoh, Shannon L. Matheny, Vahid Naini, and Thomas W. Griffin, Janssen Research & Development, Los Angeles; Eric J. Small and Charles J. Ryan, Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, CA; Johann S. de Bono, Institute for Cancer Research and Royal Marsden Hospital, Sutton, United Kingdom; Christopher J. Logothetis, MD Anderson Cancer Center, Houston, TX; Karim Fizazi, Institut Gustave Roussy, University of Paris Sud, Villejuif, France; Paul de Souza, University of Western Sydney School of Medicine, Ingham Institute, Liverpool, New South Wales, Australia; Philip W. Kantoff, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA; Celestia S. Higano, University of Washington, Seattle, WA; Jinhui Li, Janssen Research & Development, Raritan, NJ; and Tomasz Burzykowski, International Drug Development Institute, Louvain-la-Neuve, Belgium.

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http://dx.doi.org/10.1200/JCO.2014.55.3875DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4881370PMC
April 2015

Circulating tumor cell biomarker panel as an individual-level surrogate for survival in metastatic castration-resistant prostate cancer.

J Clin Oncol 2015 Apr 23;33(12):1348-55. Epub 2015 Mar 23.

Howard I. Scher, Glenn Heller, Daniel C. Danila, and Martin Fleisher, Memorial Sloan Kettering Cancer Center; Howard I. Scher and Daniel C. Danila, Weill Cornell Medical College; Xiaoyu Jia, Columbia University, New York, NY; Arturo Molina, Janssen Research & Development, Menlo Park; Weimin Peng, Janssen Research & Development, Los Angeles; Thian Kheoh, Janssen Research & Development, San Diego, CA; Gerhardt Attard, Shahneen K. Sandhu, David Olmos, Ruth Riisnaes, and Johann S. de Bono, Institute of Cancer Research; Gerhardt Attard, Shahneen K. Sandhu, David Olmos, and Johann S. de Bono, Royal Marsden Hospital, Sutton, United Kingdom; Robert McCormack, Janssen Research & Development, Raritan, NJ; and Tomasz Burzykowski and Marc Buyse, International Drug Development Institute, Louvain-la-Neuve, Belgium.

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http://jco.ascopubs.org/content/early/2015/03/23/JCO.2014.55
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http://jco.ascopubs.org/cgi/doi/10.1200/JCO.2014.55.3487
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http://dx.doi.org/10.1200/JCO.2014.55.3487DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4397279PMC
April 2015

On the relationship between the causal-inference and meta-analytic paradigms for the validation of surrogate endpoints.

Biometrics 2015 Mar 1;71(1):15-24. Epub 2014 Oct 1.

I-BioStat, Universiteit Hasselt, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1111/biom.12245DOI Listing
March 2015

A nonhomogeneous hidden markov model for gene mapping based on next-generation sequencing data.

J Comput Biol 2015 Feb 22;22(2):178-88. Epub 2015 Jan 22.

Interuniversity Institute for Biostatistics and statistical Bioinformatics, Hasselt University , Diepenbeek, Belgium .

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http://dx.doi.org/10.1089/cmb.2014.0258DOI Listing
February 2015

CXCL5 as a potential novel prognostic factor in early stage non-small cell lung cancer: results of a study of expression levels of 23 genes.

Tumour Biol 2014 May 6;35(5):4619-28. Epub 2014 Feb 6.

Department of Clinical Molecular Biology, Medical University of Bialystok, 13 Waszyngtona St, 15-267, Bialystok, Poland.

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http://dx.doi.org/10.1007/s13277-014-1605-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4009141PMC
May 2014

Comparison of the Mahalanobis distance and Pearson's χ² statistic as measures of similarity of isotope patterns.

J Am Soc Mass Spectrom 2014 Feb 19;25(2):293-6. Epub 2013 Nov 19.

I-BioStat, Hasselt University, Hasselt, Belgium.

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http://dx.doi.org/10.1007/s13361-013-0773-zDOI Listing
February 2014

The use of the isotopic distribution as a complementary quality metric to assess tandem mass spectra results.

J Proteomics 2014 Feb 31;98:150-8. Epub 2013 Dec 31.

Interuniversity Institute for Biostatistics and statistical Bioinformatics, Hasselt University, Belgium; VITO, Mol, Belgium; Center for Proteomics, Antwerp, Belgium. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S18743919130064
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http://dx.doi.org/10.1016/j.jprot.2013.12.013DOI Listing
February 2014

Progression-free survival as a surrogate for overall survival in advanced/recurrent gastric cancer trials: a meta-analysis.

J Natl Cancer Inst 2013 Nov 9;105(21):1667-70. Epub 2013 Oct 9.

Affiliations of authors: Biostatistics Department, INSEM U900 Institut Curie, Paris, France (XP); Translational Research and Clinical Trial Center, Hokkaido University Hospital, Hokkaido, Japan (KO); Seoul National University College of Medicine, Oncology Division, Seoul, Korea (Y-JB); Jules Bordet Hospital, Brussels, Belgium (HB); St. Marianna University School of Medicine, Kawasaki, Japan (NB); Hôpital Robert Debré, Reims, Department of Clinical Oncology, France (OB); Dana-Farber Cancer Institute and Harvard School of Public Health, Department of Biostatistics, Boston, MA (PC); National Cancer Center Hospital East, Department of Gastrointestinal Oncology, Kashiwa, Japan (NF, AO); Institut Gustave Roussy, Université Paris XI, Biostatistics and Epidemiology Department, Villejuif, France (SMi); Johannes Gutenberg University, Medical Department, Mainz, Germany (MM); Yokohama City University, Department of Biostatistics and Epidemiology, Kanagawa, Japan (SMo); University of Tokyo, Tokyo, Japan (YO); University Hospital, Department of Surgery, Geneva, Switzerland (AR); University Hospital Europeen Georges Pompidou, Gastro-enterology Department, Paris, France (PR); Tokai Central Hospital, Sohara, Japan (JS); Mayo Clinic, Division of Biomedical Statistics and Informatics, Rochester, MN (DS); National Cancer Center Hospital East, Kashiwa, Japan (MS); Aichi Cancer Center Hospital, Department of Gastrointestinal Oncology, Aichi, Japan (KS); Charité-Universitätsmedizin Berlin, Department of Haematology, Oncology, and Tumorimmunology, Berlin, Germany (PT-P); University Hospital Gasthuisberg, Digestive Oncology Unit, Leuven, Belgium (EVC); Hasselt University, Interuniversity Institute for Biostatistics and Statistical Bioinformatics, Diepenbeek, Belgium (TB, MB); International Drug Development Institute, Louvain-la-Neuve, Belgium (MB).

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http://dx.doi.org/10.1093/jnci/djt269DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4994928PMC
November 2013

Disease-free survival as a surrogate for overall survival in adjuvant trials of gastric cancer: a meta-analysis.

J Natl Cancer Inst 2013 Nov 9;105(21):1600-7. Epub 2013 Oct 9.

Affiliations of authors: Translational Research and Clinical Trial Center, Hokkaido University Hospital, Sapporo, Japan (KO); Biostatistics dpt, INSEM U900, Institut Curie, Paris, France (XP); Mayo Clinic, Rochester, MN (SA, DS); Cancer Research Institute, Seoul National University College of Medicine, Seoul, Korea (Y-JB); SWOG Statistical Center, Seattle, WA (JB); Brussels, Belgium (HB); Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute and Department of Biostatistics, Harvard School of Public Health, Boston, MA (PC); University Clinic Leipzig, University Cancer Center, Leipzig, Germany (FL); Biostatistics and Epidemiology department, Institut Gustave-Roussy, Universite Paris XI, Villejuif, France (SMi, J-PP); Department of Biostatistics, Yokohama City University, Yokohama, Japan (SMo); Department of Biostatistics, School of Public Health, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan (YO); Gastro-enterology department, University Hospital Europeen Georges Pompidou, Paris, France (PR); Department of Surgery, Hyogo College of Medicine, Nishinomiya, Japan (MS); Tokai Central Hospital, Kakumuhara, Japan (JS); Department of Gastroenterology and Gastrointestinal Oncology, National Cancer Center Hospital East, Kashiwa, Japan (KS); Digestive Oncology Unit, University Hospital Gasthuisberg, Leuven, Belgium (EVC); International Drug Development Institute, Louvain-la-Neuve, Belgium (MB, TB); I-BioStat, Hasselt University, Diepenbeek, Belgium (MB, TB).

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http://dx.doi.org/10.1093/jnci/djt270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4202244PMC
November 2013

Markers for nutrition studies: review of criteria for the evaluation of markers.

Eur J Nutr 2013 Oct 17;52(7):1685-99. Epub 2013 Aug 17.

Jan de Vries, De Vries Nutrition Solutions, Reuvekamp 26, 7213-CE, Gorssel, The Netherlands.

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http://dx.doi.org/10.1007/s00394-013-0553-3DOI Listing
October 2013

A statistical approach to central monitoring of data quality in clinical trials.

Clin Trials 2012 Dec 8;9(6):705-13. Epub 2012 Jun 8.

International Drug Development Institute, Louvain-la-Neuve, Belgium.

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http://dx.doi.org/10.1177/1740774512447898DOI Listing
December 2012

The correlation structure of longitudinal measurements of vision in patients with macular degeneration.

Pharm Stat 2011 Mar-Apr;10(2):115-21

International Drug Development Institute (IDDI), Louvain-la-Neuve, Belgium; Interuniversity Institute for Biostatistics and statistical Bioinformatics (I-BioStat), Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1002/pst.419DOI Listing
June 2012

The isotopic distribution conundrum.

Mass Spectrom Rev 2012 Jan-Feb;31(1):96-109. Epub 2011 May 16.

Flemish Institute for Technological Research, VITO, Mol, Belgium.

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http://dx.doi.org/10.1002/mas.20339DOI Listing
April 2012

An efficient method to calculate the aggregated isotopic distribution and exact center-masses.

J Am Soc Mass Spectrom 2012 Apr 15;23(4):753-63. Epub 2012 Feb 15.

I-BioStat, Hasselt University, Diepenbeek, Belgium.

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http://link.springer.com/10.1007/s13361-011-0326-2
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http://dx.doi.org/10.1007/s13361-011-0326-2DOI Listing
April 2012

A bayesian model averaging approach to the quantification of overlapping peptides in an maldi-tof mass spectrum.

Int J Proteomics 2011 23;2011:928391. Epub 2011 May 23.

Department of Electrical Engineering, ESAT/SCD Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, Bus 2446, 3001 Heverlee, Belgium.

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https://doclib.uhasselt.be/dspace/bitstream/1942/13353/1/Mod
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http://downloads.hindawi.com/journals/ijpro/2011/928391.pdf
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http://www.hindawi.com/journals/ijpro/2011/928391/
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http://dx.doi.org/10.1155/2011/928391DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3200211PMC
November 2011

A Markov-chain model for the analysis of high-resolution enzymatically 18O-labeled mass spectra.

Stat Appl Genet Mol Biol 2011 6;10:Article 1. Epub 2011 Jan 6.

VITO-Flemish Institute for Technological Research.

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http://dx.doi.org/10.2202/1544-6115.1538DOI Listing
April 2011

A Bayesian Markov-chain-based heteroscedastic regression model for the analysis of 18O-labeled mass spectra.

J Am Soc Mass Spectrom 2011 Mar 15;22(3):499-507. Epub 2011 Jan 15.

Department of Electrical Engineering, ESAT/SCD Katholieke Universiteit Leuven, Kasteelpark Arenberg 10, bus 2446, 3001 Heverlee, Leuven, Belgium.

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http://dx.doi.org/10.1007/s13361-010-0056-xDOI Listing
March 2011

Markov-chain-based heteroscedastic regression model for the analysis of high-resolution enzymatically 18O-labeled mass spectra.

J Proteome Res 2010 May;9(5):2669-77

I-BioStat, Hasselt University, Diepenbeek, Belgium and VITO, Mol, Belgium.

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http://dx.doi.org/10.1021/pr100169aDOI Listing
May 2010

Using linear mixed models for normalization of cDNA microarrays.

Stat Appl Genet Mol Biol 2007 26;6:Article 19. Epub 2007 Jul 26.

Hasselt University, Belgium.

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http://dx.doi.org/10.2202/1544-6115.1249DOI Listing
July 2009

A strategy for the prior processing of high-resolution mass spectral data obtained from high-dimensional combined fractional diagonal chromatography.

J Mass Spectrom 2009 Apr;44(4):516-29

Interuniversity Institute for Biostatistics and statistical Bioinformatics, Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1002/jms.1527DOI Listing
April 2009

Individual- and trial-level surrogacy in colorectal cancer.

Stat Methods Med Res 2008 Oct 19;17(5):467-75. Epub 2008 Feb 19.

IDDI (International Drug Development Institute), Louvain-la-Neuve, Belgium and Center for Statistics, Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1177/0962280207081864DOI Listing
October 2008

Surrogate endpoints: wishful thinking or reality?

Stat Methods Med Res 2008 Oct 15;17(5):463-6. Epub 2008 Apr 15.

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http://dx.doi.org/10.1177/0962280207081866DOI Listing
October 2008

Fitting conditional survival models to meta-analytic data by using a transformation toward mixed-effects models.

Biometrics 2008 Sep 31;64(3):834-42. Epub 2007 Dec 31.

Hasselt University, Center for Statistics, Agoralaan, Building D, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1111/j.1541-0420.2007.00960.xDOI Listing
September 2008

A model-based method for the prediction of the isotopic distribution of peptides.

J Am Soc Mass Spectrom 2008 May 31;19(5):703-12. Epub 2008 Jan 31.

Center for Statistics, Hasselt University, Diepenbeek, Belgium.

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http://dx.doi.org/10.1016/j.jasms.2008.01.009DOI Listing
May 2008

Titrating Theileria parva: single stocks against combination of stocks.

Exp Parasitol 2008 Apr 24;118(4):522-30. Epub 2007 Nov 24.

Institute of Tropical Medicine, Animal Health, Nationalestraat, Antwerp, Belgium.

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http://dx.doi.org/10.1016/j.exppara.2007.11.005DOI Listing
April 2008

Exploring and validating surrogate endpoints in colorectal cancer.

Lifetime Data Anal 2008 Mar 20;14(1):54-64. Epub 2008 Jan 20.

Center for Statistics, Hasselt University, Agoralaan D, 3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1007/s10985-007-9079-4DOI Listing
March 2008

Surrogate threshold effect: an alternative measure for meta-analytic surrogate endpoint validation.

Pharm Stat 2006 Jul-Sep;5(3):173-86

Center for Statistics, Hasselt University, Agoralaan (bldg. D), B3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1002/pst.207DOI Listing
November 2007

Using a Poisson approximation to predict the isotopic distribution of sulphur-containing peptides in a peptide-centric proteomic approach.

Rapid Commun Mass Spectrom 2007 ;21(20):3387-91

Center for Statistics, Hasselt University, Agoralaan D, 3590 Diepenbeek, Belgium.

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http://doi.wiley.com/10.1002/rcm.3237
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http://dx.doi.org/10.1002/rcm.3237DOI Listing
November 2007

A modeling approach to the analysis of nerve regenerative experiments.

J Biopharm Stat 2006 ;16(6):843-59

Center for Statistics, Hasselt University, Center for Statistics, Diepenbeek, Belgium.

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http://dx.doi.org/10.1080/10543400600795384DOI Listing
January 2007

The use of background signal in the transformation of cDNA-microarray measurements.

Appl Bioinformatics 2006 ;5(3):161-72

Center for Statistics, Hasselt University, Agoralaan, Diepenbeek, Belgium.

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http://dx.doi.org/10.2165/00822942-200605030-00004DOI Listing
November 2006

Prostate-specific antigen (PSA) alone is not an appropriate surrogate marker of long-term therapeutic benefit in prostate cancer trials.

Eur J Cancer 2006 Jul 30;42(10):1344-50. Epub 2006 May 30.

European Organisation for Research and Treatment of Cancer (EORTC) Data Center, Avenue E. Mounier 83/11, 1200 Brusells, Biostatistics Department, Brussels, Belgium.

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http://dx.doi.org/10.1016/j.ejca.2006.02.011DOI Listing
July 2006

Joint modelling of repeated measurements and event time: application to performance traits and survival of lambs bred in sub-humid tropics.

Genet Sel Evol 2005 Mar-Apr;37(2):175-97

Department of Mathematics, University of Nairobi, Kenya International Livestock Research Institute.

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http://dx.doi.org/10.1051/gse:2004043DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2697229PMC
February 2006

No association of leukemia inhibitory factor (LIF) DNA polymorphisms with multiple sclerosis.

J Neuroimmunol 2006 Feb 2;171(1-2):189-92. Epub 2005 Nov 2.

Biomedical Research Institute, Hasselt University and Transnational University Limburg, Diepenbeek, Belgium.

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http://dx.doi.org/10.1016/j.jneuroim.2005.09.016DOI Listing
February 2006

A version of the EM algorithm for proportional hazard model with random effects.

Biom J 2005 Dec;47(6):847-62

Center for Statistics, Limburgs Universitair Centrum, Universitaire Campus, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1002/bimj.200410141DOI Listing
December 2005

Design and analysis of drug combination experiments.

Biom J 2005 Jun;47(3):299-308

Limburgs Universitair Centrum, Center for Statistics, Biostatistics, Universitaire Campus, B-3590 Diepenbeek, Belgium.

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http://dx.doi.org/10.1002/bimj.200410124DOI Listing
June 2005

Statistical interaction in the survival analysis of early breast cancer using registry data: role of breast conserving surgery and radiotherapy.

Tumori 2005 Jan-Feb;91(1):9-14

Oncology Center, Academic Hospital, Vrije Universiteit Brussels, Jette, Belgium.

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May 2005

Predicted and observed thyroid cancer incidence in Poland after year 1986.

Wiad Lek 2004 ;57(7-8):306-10

Center for Statistics, Limburgs Universitair Centrum, Diepenbeek, Belgium.

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January 2005

Axillary sentinel node and tumour-related factors associated with non-sentinel node involvement in breast cancer.

Jpn J Clin Oncol 2004 Sep;34(9):519-24

Bacs-Kiskun County Teaching Hospital, Medical School of the University of Sciences at Szeged, H-6000 Kecskemét, Hungary.

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http://dx.doi.org/10.1093/jjco/hyh090DOI Listing
September 2004