Ting-Wen Chen

Ting-Wen Chen

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Ting-Wen Chen

Ting-Wen Chen

Publications by authors named "Ting-Wen Chen"

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42Publications

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Characterization of Copy Number Variations in Oral Cavity Squamous Cell Carcinoma Reveals a Novel Role for MLLT3 in Cell Invasiveness.

Oncologist 2019 Dec 4;24(12):e1388-e1400. Epub 2019 Jul 4.

Department of Otolaryngology-Head and Neck Surgery, Chang Gung Memorial Hospital, Taoyuan, Taiwan

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http://dx.doi.org/10.1634/theoncologist.2019-0063DOI Listing
December 2019

Tigecycline-non-susceptible hypervirulent Klebsiella pneumoniae strains in Taiwan.

J Antimicrob Chemother 2019 Nov 8. Epub 2019 Nov 8.

Institute of Emergency and Critical Care Medicine, National Yang-Ming University, Taipei, Taiwan.

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http://dx.doi.org/10.1093/jac/dkz450DOI Listing
November 2019

Novel Role for miR-1290 in Host Species Specificity of Influenza A Virus.

Mol Ther Nucleic Acids 2019 Sep 15;17:10-23. Epub 2019 May 15.

Research Center for Emerging Viral Infections, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan; Department of Medical Biotechnology and Laboratory Science, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan; Department of Laboratory Medicine, Linkou Chang Gung Memorial Hospital, Taoyuan 33305, Taiwan; Research Center for Chinese Herbal Medicine, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33303, Taiwan; Research Center for Food and Cosmetic Safety, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33303, Taiwan; Graduate Institute of Health Industry Technology, College of Human Ecology, Chang Gung University of Science and Technology, Taoyuan 33303, Taiwan. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S21622531193012
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http://dx.doi.org/10.1016/j.omtn.2019.04.028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6554369PMC
September 2019

Integrated analyses utilizing metabolomics and transcriptomics reveal perturbation of the polyamine pathway in oral cavity squamous cell carcinoma.

Anal Chim Acta 2019 Mar 2;1050:113-122. Epub 2018 Nov 2.

Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan; Department of Otolaryngology - Head & Neck Surgery, Chang Gung Memorial Hospital, Linkou, Taoyuan, Taiwan; Department of Medical Biotechnology and Laboratory Science, College of Medicine, Chang Gung University, Taoyuan, Taiwan; Research Center for Emerging Viral Infections, College of Medicine, Chang Gung University, Taoyuan, Taiwan. Electronic address:

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http://dx.doi.org/10.1016/j.aca.2018.10.070DOI Listing
March 2019

TACCO, a Database Connecting Transcriptome Alterations, Pathway Alterations and Clinical Outcomes in Cancers.

Sci Rep 2019 Mar 7;9(1):3877. Epub 2019 Mar 7.

Institute of Bioinformatics and Systems Biology, National Chiao Tung University, Hsinchu, Taiwan.

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http://dx.doi.org/10.1038/s41598-019-40629-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6405743PMC
March 2019

MiR-31-5p-ACOX1 Axis Enhances Tumorigenic Fitness in Oral Squamous Cell Carcinoma Via the Promigratory Prostaglandin E2.

Theranostics 2018 1;8(2):486-504. Epub 2018 Jan 1.

Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Guishan, Taoyuan, Taiwan, ROC.

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http://dx.doi.org/10.7150/thno.22059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5743562PMC
December 2018

Histidine-Dependent Protein Methylation Is Required for Compartmentalization of CTP Synthase.

Cell Rep 2018 09;24(10):2733-2745.e7

Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan; Department of Biochemistry and Molecular Biology, College of Medicine, Chang Gung University, Taoyuan 33302, Taiwan; Molecular Medicine Research Center, Chang Gung University, Taoyuan 33302, Taiwan; Liver Research Center, Chang Gung Memorial Hospital, Linkou, Taiwan. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2018.08.007DOI Listing
September 2018

Complete Genome Sequence of a New Halophilic Archaeon, , Isolated from a Solar Saltern in Southern Taiwan.

Genome Announc 2018 Feb 1;6(5). Epub 2018 Feb 1.

Department of Biochemical Science and Technology, National Taiwan University, Taipei, Taiwan

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http://genomea.asm.org/lookup/doi/10.1128/genomeA.01529-17
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http://dx.doi.org/10.1128/genomeA.01529-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5794945PMC
February 2018

Neutral lipid fatty acid composition as trait and constraint in Collembola evolution.

Ecol Evol 2017 11 16;7(22):9624-9638. Epub 2017 Oct 16.

J. F. Blumenbach Institute of Zoology and Anthropology University of Göttingen Göttingen Germany.

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http://dx.doi.org/10.1002/ece3.3472DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5696395PMC
November 2017

Combining Genotype, Phenotype, and Environment to Infer Potential Candidate Genes.

J Hered 2017 03;108(2):207-216

EPHE, PSL Research University, CNRS, UM, SupAgro, IRD, INRA, UMR, Montpellier, France.

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http://dx.doi.org/10.1093/jhered/esw077DOI Listing
March 2017

PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms.

BMC Bioinformatics 2016 Dec 22;17(Suppl 19):513. Epub 2016 Dec 22.

Bioinformatics Center, Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1186/s12859-016-1366-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5260104PMC
December 2016

Arm Selection Preference of MicroRNA-193a Varies in Breast Cancer.

Sci Rep 2016 06 16;6:28176. Epub 2016 Jun 16.

Center For Geriatrics and Gerontology, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan.

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http://dx.doi.org/10.1038/srep28176DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910092PMC
June 2016

Evaluation and application of the strand-specific protocol for next-generation sequencing.

Biomed Res Int 2015 29;2015:182389. Epub 2015 Mar 29.

Genomics and Proteomics Core Laboratory, Department of Medical Research, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, Kaohsiung, Taiwan.

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http://www.hindawi.com/journals/bmri/2015/182389/
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http://dx.doi.org/10.1155/2015/182389DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4393923PMC
February 2016

Vanno: a visualization-aided variant annotation tool.

Hum Mutat 2015 Feb;36(2):167-74

Bioinformatics Core Laboratory, Chang Gung University, Taoyuan, Taiwan; Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1002/humu.22684DOI Listing
February 2015

Emerging role of microRNAs in modulating endothelin-1 expression in gastric cancer.

Oncol Rep 2015 Jan 11;33(1):485-93. Epub 2014 Nov 11.

Center for Geriatrics and Gerontology, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan, R.O.C.

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http://dx.doi.org/10.3892/or.2014.3598DOI Listing
January 2015

CMPD: cancer mutant proteome database.

Nucleic Acids Res 2015 Jan 14;43(Database issue):D849-55. Epub 2014 Nov 14.

Bioinformatics Core Laboratory, Chang Gung University, Taoyuan 333, Taiwan

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http://dx.doi.org/10.1093/nar/gku1182DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4383976PMC
January 2015

Potential impact on kidney infection: a whole-genome analysis of Leptospira santarosai serovar Shermani.

Emerg Microbes Infect 2014 Nov 26;3(11):e82. Epub 2014 Nov 26.

Kidney Research Center, Chang Gung Memorial Hospital , Taoyuan, Taiwan 33305.

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http://dx.doi.org/10.1038/emi.2014.78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4274889PMC
November 2014

ChIPseek, a web-based analysis tool for ChIP data.

BMC Genomics 2014 Jun 30;15:539. Epub 2014 Jun 30.

Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1186/1471-2164-15-539DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4092222PMC
June 2014

MicroRNA expression profiles in human breast cancer cells after multifraction and single-dose radiation treatment.

Oncol Rep 2014 May 13;31(5):2147-56. Epub 2014 Mar 13.

Department of Medical Education and Research, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan, R.O.C.

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http://dx.doi.org/10.3892/or.2014.3089DOI Listing
May 2014

Comprehensive microRNA profiling of prostate cancer cells after ionizing radiation treatment.

Oncol Rep 2014 Mar 21;31(3):1067-78. Epub 2014 Jan 21.

Department of Medical Education and Research, Kaohsiung Veterans General Hospital, Kaohsiung, Taiwan, R.O.C.

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http://dx.doi.org/10.3892/or.2014.2988DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3926670PMC
March 2014

OMICS in ecology: systems level analyses of Halobacterium salinarum reveal large-scale temperature-mediated changes and a requirement of CctA for thermotolerance.

OMICS 2014 Jan 22;18(1):65-80. Epub 2013 Oct 22.

1 Department of Biotechnology and Laboratory Science in Medicine, National Yang Ming University , Taipei, Taiwan, Republic of China .

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http://dx.doi.org/10.1089/omi.2012.0117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3903169PMC
January 2014

CPAP: Cancer Panel Analysis Pipeline.

Hum Mutat 2013 Oct 13;34(10):1340-6. Epub 2013 Aug 13.

Bioinformatics Center, Chang Gung University, Taoyuan, Taiwan; Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1002/humu.22386DOI Listing
October 2013

FastAnnotator--an efficient transcript annotation web tool.

BMC Genomics 2012 13;13 Suppl 7:S9. Epub 2012 Dec 13.

Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1186/1471-2164-13-S7-S9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521244PMC
June 2013

Meta-analytical biomarker search of EST expression data reveals three differentially expressed candidates.

BMC Genomics 2012 13;13 Suppl 7:S12. Epub 2012 Dec 13.

Institute of Biomedical Informatics, National Yang Ming University, Taipei, Taiwan, ROC.

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http://dx.doi.org/10.1186/1471-2164-13-S7-S12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3521215PMC
June 2013

VIP DB--a viral protein domain usage and distribution database.

Genomics 2012 Sep 24;100(3):149-56. Epub 2012 Jun 24.

Molecular Medicine Research Center, Chang Gung University, Taoyuan, Taiwan.

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http://dx.doi.org/10.1016/j.ygeno.2012.06.008DOI Listing
September 2012

Interrogation of alternative splicing events in duplicated genes during evolution.

BMC Genomics 2011 Nov 30;12 Suppl 3:S16. Epub 2011 Nov 30.

Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan.

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http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2164-12-S3-S16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3333175PMC
November 2011

DODO: an efficient orthologous genes assignment tool based on domain architectures. Domain based ortholog detection.

BMC Bioinformatics 2010 Oct 15;11 Suppl 7:S6. Epub 2010 Oct 15.

Institute of Biomedical Informatics, National Yang-Ming University, Taipei, Taiwan.

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http://dx.doi.org/10.1186/1471-2105-11-S7-S6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2957689PMC
October 2010