Publications by authors named "Ting Ni"

80 Publications

Independent component analysis based gene co-expression network inference (ICAnet) to decipher functional modules for better single-cell clustering and batch integration.

Nucleic Acids Res 2021 Feb 22. Epub 2021 Feb 22.

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, Shanghai Engineering Research Center of Industrial Microorganisms, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438, P.R. China.

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February 2021

Prevalent intron retention fine-tunes gene expression and contributes to cellular senescence.

Aging Cell 2020 12 4;19(12):e13276. Epub 2020 Dec 4.

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, P.R. China.

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December 2020

Smyd3-PARP16 axis accelerates unfolded protein response and vascular aging.

Aging (Albany NY) 2020 11 3;12(21):21423-21445. Epub 2020 Nov 3.

Department of Pharmacology, Human Phenome Institute, School of Pharmacy, Fudan University, Shanghai, P.R. China.

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November 2020

opvCRISPR: One-pot visual RT-LAMP-CRISPR platform for SARS-cov-2 detection.

Biosens Bioelectron 2021 Jan 26;172:112766. Epub 2020 Oct 26.

State Key Laboratory of Genetic Engineering, School of Life Sciences, Zhongshan Hospital, Fudan University, Shanghai, 200432, PR China; Shanghai Engineering Research Center of Industrial Microorganisms, Shanghai, PR China; School of Life Sciences, Co-innovation Center of Neuroregeneration, Jiangsu Key Laboratory of Neuroregeneration, Nantong University, Nantong, 226001, China. Electronic address:

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January 2021

Effect of Time Interval Between LEEP and Subsequent Hysterectomy on Postoperative Infectious Morbidity.

Ther Clin Risk Manag 2020 10;16:839-847. Epub 2020 Sep 10.

Department of Gynecologic Oncology, International Peace Maternity and Child Health Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai 200030, People's Republic of China.

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September 2020

A bioenergetic shift is required for spermatogonial differentiation.

Cell Discov 2020 18;6:56. Epub 2020 Aug 18.

Department of Animal Sciences, College of Agriculture and Natural Resources, Michigan State University, East Lansing, MI 48824 USA.

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August 2020

Single-Cell Transcriptome Analysis Reveals Six Subpopulations Reflecting Distinct Cellular Fates in Senescent Mouse Embryonic Fibroblasts.

Front Genet 2020 11;11:867. Epub 2020 Aug 11.

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Human Phenome Institute, Fudan University, Shanghai, China.

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August 2020

Cluster of differentiation 19 chimeric antigen receptor T-cell therapy in pediatric acute lymphoblastic leukemia.

Oncol Lett 2020 Oct 22;20(4):36. Epub 2020 Jul 22.

School of Basic Medical Sciences and Forensic Medicine, Hangzhou Medical College, Hangzhou, Zhejiang 310053, P.R. China.

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October 2020

Histone methyltransferase Smyd3 is a new regulator for vascular senescence.

Aging Cell 2020 09 11;19(9):e13212. Epub 2020 Aug 11.

Department of Pharmacology, Human Phenome Institute, School of Pharmacy, Fudan University, Shanghai, China.

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September 2020

An automated dynamic chamber system for exchange flux measurement of reactive nitrogen oxides (HONO and NO) in farmland ecosystems of the Huaihe River Basin, China.

Sci Total Environ 2020 Nov 11;745:140867. Epub 2020 Jul 11.

Anhui Institute of Meteorological Sciences, Anhui Province Key Laboratory of Atmospheric Science and Satellite Remote Sensing, Hefei 230031, China; Shouxian National Climatology Observatory, Huaihe River Basin Typical Farm Eco-meteorological Experiment Field of CMA, Shouxian 232200, China.

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November 2020

A practical method of using the anatomical space of the vesicouterine ligament for laparoscopic radical hysterectomy: a retrospective cohort study.

J Int Med Res 2020 Jun;48(6):300060520926857

Department of Gynecologic Oncology, The International Peace Maternity and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.

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June 2020

Removal of Sb(III) by sulfidated nanoscale zerovalent iron: The mechanism and impact of environmental conditions.

Sci Total Environ 2020 Sep 25;736:139629. Epub 2020 May 25.

College of Environmental Science and Engineering, Hunan University, Changsha 410082, China; Key Laboratory of Environmental Biology and Pollution Control, Hunan University, Ministry of Education, Changsha 410082, China.

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September 2020

DRG Neurons Promote Perineural Invasion of Endometrial Cancer via GluR2.

J Cancer 2020 10;11(9):2518-2528. Epub 2020 Feb 10.

Department of Gynecology, International Peace Maternity and Child Health Hospital, Shanghai Jiao Tong University School of Medicine, No. 910 Hengshan Road, Shanghai 200030, China.

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February 2020

Tempo-spatial alternative polyadenylation analysis reveals that 3' UTR lengthening of Mdm2 regulates p53 expression and cellular senescence in aged rat testis.

Biochem Biophys Res Commun 2020 03 20;523(4):1046-1052. Epub 2020 Jan 20.

Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, 200438, China. Electronic address:

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March 2020

Correction to: Oroxylin A promotes PTEN-mediated negative regulation of MDM2 transcription via SIRT3-mediated deacetylation to stabilize p53 and inhibit glycolysis in wt-p53 cancer cells.

J Hematol Oncol 2019 Dec 30;12(1):143. Epub 2019 Dec 30.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, China Pharmaceutical University, 24 Tongjiaxiang, Nanjing, 210009, People's Republic of China.

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December 2019

Endogenous Retrovirus-Derived Long Noncoding RNA Enhances Innate Immune Responses via Derepressing RELA Expression.

mBio 2019 07 30;10(4). Epub 2019 Jul 30.

Ministry of Education Key Laboratory of Contemporary Anthropology, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, People's Republic of China

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July 2019

A ZEB1/p53 signaling axis in stromal fibroblasts promotes mammary epithelial tumours.

Nat Commun 2019 07 19;10(1):3210. Epub 2019 Jul 19.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing, 211198, China.

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July 2019

Global downregulation of pigmentation-associated genes in human premature hair graying.

Exp Ther Med 2019 Aug 11;18(2):1155-1163. Epub 2019 Jun 11.

State Key Laboratory of Genetic Engineering and Ministry of Education Key Laboratory of Contemporary Anthropology, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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August 2019

HNRNPA1-mediated 3' UTR length changes of contributes to cancer- and senescence-associated phenotypes.

Aging (Albany NY) 2019 06;11(13):4407-4437

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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June 2019

Spliceosome disassembly factors ILP1 and NTR1 promote miRNA biogenesis in Arabidopsis thaliana.

Nucleic Acids Res 2019 09;47(15):7886-7900

State Key Laboratory of Genetic Engineering and Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Huashan Hospital and School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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September 2019

Difference analysis in prevalence of incidental pancreatic cystic lesions between computed tomography and magnetic resonance imaging.

BMC Med Imaging 2019 05 24;19(1):43. Epub 2019 May 24.

Department of Radiology, Zhongshan Hospital, Fudan University, and Shanghai Institute of Medical Imaging, 180 Fenglin Rd., Shanghai, 200032, China.

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May 2019

Chromatin remodeling factor BAZ1A regulates cellular senescence in both cancer and normal cells.

Life Sci 2019 Jul 11;229:225-232. Epub 2019 May 11.

Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai 200438, China. Electronic address:

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July 2019

Alternative polyadenylation dependent function of splicing factor SRSF3 contributes to cellular senescence.

Aging (Albany NY) 2019 03;11(5):1356-1388

State Key Laboratory of Genetic Engineering and Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai 200438, China.

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March 2019

Exploitation of nuclear protein SFPQ by the encephalomyocarditis virus to facilitate its replication.

Biochem Biophys Res Commun 2019 02 18;510(1):65-71. Epub 2019 Jan 18.

Ministry of Education Key Laboratory of Contemporary Anthropology, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, 200438, PR China. Electronic address:

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February 2019

CD47 Blockade Inhibits Tumor Progression through Promoting Phagocytosis of Tumor Cells by M2 Polarized Macrophages in Endometrial Cancer.

J Immunol Res 2018 7;2018:6156757. Epub 2018 Nov 7.

Department of Gynecology, International Peace Maternity and Child Health Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

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January 2019

Author Correction: An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells.

Sci Rep 2018 Dec 12;8(1):17900. Epub 2018 Dec 12.

The State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences, Fudan University, Shanghai, 200438, China.

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December 2018

Sex Differences in Genetic Associations With Longevity.

JAMA Netw Open 2018 08 24;1(4):e181670. Epub 2018 Aug 24.

Center for the Study of Aging and Human Development, Medical School of Duke University, Durham, North Carolina (Zeng, H. Chen); Center for Healthy Aging and Development Studies, National School of Development, Raissun Institute for Advanced Studies, Peking University, Beijing, China (Zeng, Bai); BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China (Nie);BGI-Shenzhen, Shenzhen, China (Nie, Xiaomin Liu, Ye, Z. Chen, Bolund, Hou, Xiao Liu, Xu, H. Yang); The First Affiliated Hospital, Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou, China (Min, E. Xie); Business School of Xiangtan University, Xiangtan, China (H. Chen); Division of Non-Communicable Disease Control and Community Health, Chinese Center for Disease Control and Prevention, Beijing, China (Yin); National Institute of Environmental Health, Chinese Center for Disease Control and Prevention, Beijing, China (Lv, Shi); Department of Sociology, Peking University, Beijing, China (Lu, Li); School of Life Sciences, Fudan University, Shanghai, China (Ni); Department of Biomedicine, Aarhus University, Aarhus, Denmark (Bolund); Duke Population Research Institute, Duke University, Durham, North Carolina (Land, Yashin, O'Rand); The MOH Key Laboratory of Geriatrics, Beijing Hospital, National Center of Gerontology, Beijing, China (Sun, Z. Yang); School of Life Sciences, Peking University, Beijing, China (Tao, Gu); Boston University, Boston, Massachusetts (Gurinovich, Sebastiani, Perls); University of Bologna, Bologna, Italy (Franceschi); Department of Biostatistics and Bioinformatics, Duke University, Durham, North Carolina (J. Xie); French National Institute on Health and Medical Research and Ecole Pratique des Hautes Etudes, University of Montpellier, Montpellier, France (Robine); Max Planck Institute for Biology of Ageing, Cologne, Germany (Deelen); Department of Molecular Epidemiology, Leiden University Medical Center, Leiden, the Netherlands (Slagboom); Molecular Physiology Institute, Medical Center, Duke University, Durham, North Carolina (Hauser); Department of Neurology, Medical Center, Duke University, Durham, North Carolina (Gottschalk, Lutz); University of Southern Denmark, Odense, Denmark (Tan, Christensen); Human Aging Research Institute and School of Life Science, Nanchang University, Jiangxi, China (Tian); James D. Watson Institute of Genome Sciences, Hangzhou, China (H. Yang); Max Planck Institute for Demographic Research, Rostock, Germany (Vaupel).

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August 2018

miR‑214 mediates vascular inflammation and apoptosis via PTEN expression.

Mol Med Rep 2018 Aug 18;18(2):2229-2236. Epub 2018 Jun 18.

Department of Cardiology, Shanghai Putuo District People's Hospital, Shanghai 200060, P.R. China.

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August 2018