Ting Ni

Ting Ni

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Spliceosome disassembly factors ILP1 and NTR1 promote miRNA biogenesis in Arabidopsis thaliana.

Nucleic Acids Res 2019 Sep;47(15):7886-7900

State Key Laboratory of Genetic Engineering and Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Huashan Hospital and School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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http://dx.doi.org/10.1093/nar/gkz526DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6736097PMC
September 2019

Global downregulation of pigmentation-associated genes in human premature hair graying.

Exp Ther Med 2019 Aug 11;18(2):1155-1163. Epub 2019 Jun 11.

State Key Laboratory of Genetic Engineering and Ministry of Education Key Laboratory of Contemporary Anthropology, Institute of Genetics, School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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http://dx.doi.org/10.3892/etm.2019.7663DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6601371PMC
August 2019

Chromatin remodeling factor BAZ1A regulates cellular senescence in both cancer and normal cells.

Life Sci 2019 Jul 11;229:225-232. Epub 2019 May 11.

Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai 200438, China. Electronic address:

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http://dx.doi.org/10.1016/j.lfs.2019.05.023DOI Listing
July 2019

A ZEB1/p53 signaling axis in stromal fibroblasts promotes mammary epithelial tumours.

Nat Commun 2019 Jul 19;10(1):3210. Epub 2019 Jul 19.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, Nanjing, 211198, China.

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http://dx.doi.org/10.1038/s41467-019-11278-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6642263PMC
July 2019

Endogenous Retrovirus-Derived Long Noncoding RNA Enhances Innate Immune Responses via Derepressing RELA Expression.

MBio 2019 Jul 30;10(4). Epub 2019 Jul 30.

Ministry of Education Key Laboratory of Contemporary Anthropology, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, People's Republic of China

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http://dx.doi.org/10.1128/mBio.00937-19DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6667616PMC
July 2019

HNRNPA1-mediated 3' UTR length changes of contributes to cancer- and senescence-associated phenotypes.

Aging (Albany NY) 2019 Jun;11(13):4407-4437

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai 200438, P.R. China.

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http://dx.doi.org/10.18632/aging.102060DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6660030PMC
June 2019

Difference analysis in prevalence of incidental pancreatic cystic lesions between computed tomography and magnetic resonance imaging.

BMC Med Imaging 2019 05 24;19(1):43. Epub 2019 May 24.

Department of Radiology, Zhongshan Hospital, Fudan University, and Shanghai Institute of Medical Imaging, 180 Fenglin Rd., Shanghai, 200032, China.

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http://dx.doi.org/10.1186/s12880-019-0341-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6534824PMC
May 2019

Alternative polyadenylation dependent function of splicing factor SRSF3 contributes to cellular senescence.

Aging (Albany NY) 2019 Mar;11(5):1356-1388

State Key Laboratory of Genetic Engineering and Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai 200438, China.

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http://dx.doi.org/10.18632/aging.101836DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6428108PMC
March 2019

Disruption of Causes Congenital Anomalies of the Kidney and Urinary Tract in Mice.

Int J Biol Sci 2018 1;14(1):10-20. Epub 2018 Jan 1.

State Key Laboratory of Genetic Engineering and National Center for International Research of Development and Disease, Institute of Developmental Biology and Molecular Medicine, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai 200433, China.

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http://dx.doi.org/10.7150/ijbs.22768DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5821045PMC
February 2019

Exploitation of nuclear protein SFPQ by the encephalomyocarditis virus to facilitate its replication.

Biochem Biophys Res Commun 2019 Feb 18;510(1):65-71. Epub 2019 Jan 18.

Ministry of Education Key Laboratory of Contemporary Anthropology, Human Phenome Institute, School of Life Sciences, Fudan University, Shanghai, 200438, PR China. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S0006291X193004
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http://dx.doi.org/10.1016/j.bbrc.2019.01.032DOI Listing
February 2019

Metastasis-related methyltransferase 1 (Merm1) represses the methyltransferase activity of Dnmt3a and facilitates RNA polymerase I transcriptional elongation.

J Mol Cell Biol 2019 Jan;11(1):78-90

MOE Key Laboratory of Cell Proliferation and Differentiation, School of Life Sciences, Peking University, Beijing, China.

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http://dx.doi.org/10.1093/jmcb/mjy023DOI Listing
January 2019

CD47 Blockade Inhibits Tumor Progression through Promoting Phagocytosis of Tumor Cells by M2 Polarized Macrophages in Endometrial Cancer.

J Immunol Res 2018 7;2018:6156757. Epub 2018 Nov 7.

Department of Gynecology, International Peace Maternity and Child Health Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.

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http://dx.doi.org/10.1155/2018/6156757DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247569PMC
January 2019

Author Correction: An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells.

Sci Rep 2018 Dec 12;8(1):17900. Epub 2018 Dec 12.

The State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences, Fudan University, Shanghai, 200438, China.

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http://dx.doi.org/10.1038/s41598-018-36738-wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6289988PMC
December 2018

miR‑214 mediates vascular inflammation and apoptosis via PTEN expression.

Mol Med Rep 2018 Aug 18;18(2):2229-2236. Epub 2018 Jun 18.

Department of Cardiology, Shanghai Putuo District People's Hospital, Shanghai 200060, P.R. China.

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http://dx.doi.org/10.3892/mmr.2018.9185DOI Listing
August 2018

Sex Differences in Genetic Associations With Longevity.

JAMA Netw Open 2018 08 24;1(4):e181670. Epub 2018 Aug 24.

Center for the Study of Aging and Human Development, Medical School of Duke University, Durham, North Carolina (Zeng, H. Chen); Center for Healthy Aging and Development Studies, National School of Development, Raissun Institute for Advanced Studies, Peking University, Beijing, China (Zeng, Bai); BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China (Nie);BGI-Shenzhen, Shenzhen, China (Nie, Xiaomin Liu, Ye, Z. Chen, Bolund, Hou, Xiao Liu, Xu, H. Yang); The First Affiliated Hospital, Institute of Translational Medicine, School of Medicine, Zhejiang University, Hangzhou, China (Min, E. Xie); Business School of Xiangtan University, Xiangtan, China (H. Chen); Division of Non-Communicable Disease Control and Community Health, Chinese Center for Disease Control and Prevention, Beijing, China (Yin); National Institute of Environmental Health, Chinese Center for Disease Control and Prevention, Beijing, China (Lv, Shi); Department of Sociology, Peking University, Beijing, China (Lu, Li); School of Life Sciences, Fudan University, Shanghai, China (Ni); Department of Biomedicine, Aarhus University, Aarhus, Denmark (Bolund); Duke Population Research Institute, Duke University, Durham, North Carolina (Land, Yashin, O'Rand); The MOH Key Laboratory of Geriatrics, Beijing Hospital, National Center of Gerontology, Beijing, China (Sun, Z. Yang); School of Life Sciences, Peking University, Beijing, China (Tao, Gu); Boston University, Boston, Massachusetts (Gurinovich, Sebastiani, Perls); University of Bologna, Bologna, Italy (Franceschi); Department of Biostatistics and Bioinformatics, Duke University, Durham, North Carolina (J. Xie); French National Institute on Health and Medical Research and Ecole Pratique des Hautes Etudes, University of Montpellier, Montpellier, France (Robine); Max Planck Institute for Biology of Ageing, Cologne, Germany (Deelen); Department of Molecular Epidemiology, Leiden University Medical Center, Leiden, the Netherlands (Slagboom); Molecular Physiology Institute, Medical Center, Duke University, Durham, North Carolina (Hauser); Department of Neurology, Medical Center, Duke University, Durham, North Carolina (Gottschalk, Lutz); University of Southern Denmark, Odense, Denmark (Tan, Christensen); Human Aging Research Institute and School of Life Science, Nanchang University, Jiangxi, China (Tian); James D. Watson Institute of Genome Sciences, Hangzhou, China (H. Yang); Max Planck Institute for Demographic Research, Rostock, Germany (Vaupel).

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http://jamanetworkopen.jamanetwork.com/article.aspx?doi=10.1
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http://dx.doi.org/10.1001/jamanetworkopen.2018.1670DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6173523PMC
August 2018

Different MR features for differentiation of intrahepatic mass-forming cholangiocarcinoma from hepatocellular carcinoma according to tumor size.

Br J Radiol 2018 Jul 5;91(1088):20180017. Epub 2018 Jun 5.

1 Department of Radiology, Zhongshan Hospital, Fudan University, and Shanghai Medical Imaging Institute , Shanghai , China.

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http://dx.doi.org/10.1259/bjr.20180017DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6209488PMC
July 2018

Antisense transcription regulates the expression of sense gene via alternative polyadenylation.

Protein Cell 2018 06 22;9(6):540-552. Epub 2017 Dec 22.

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438, China.

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http://dx.doi.org/10.1007/s13238-017-0497-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5966356PMC
June 2018

Down-regulation of cancer-associated gene CDC73 contributes to cellular senescence.

Biochem Biophys Res Commun 2018 05 5;499(4):809-814. Epub 2018 Apr 5.

Ministry of Education Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438, China. Electronic address:

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http://dx.doi.org/10.1016/j.bbrc.2018.03.228DOI Listing
May 2018

Position-specific intron retention is mediated by the histone methyltransferase SDG725.

BMC Biol 2018 04 30;16(1):44. Epub 2018 Apr 30.

State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, Human Phenome Institute, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438, People's Republic of China.

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http://dx.doi.org/10.1186/s12915-018-0513-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5925840PMC
April 2018

3' UTR lengthening as a novel mechanism in regulating cellular senescence.

Genome Res 2018 02 12. Epub 2018 Feb 12.

State Key Laboratory of Genetic Engineering and Ministry of Education (MOE) Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Huashan Hospital, Fudan University, Shanghai, 200438 China.

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http://dx.doi.org/10.1101/gr.224451.117DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5848608PMC
February 2018

NRF1 coordinates with DNA methylation to regulate spermatogenesis.

FASEB J 2017 11 28;31(11):4959-4970. Epub 2017 Jul 28.

Shanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences and School of Life Sciences, East China Normal University, Shanghai, China;

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http://dx.doi.org/10.1096/fj.201700093RDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5636708PMC
November 2017

Alternative Polyadenylation: Methods, Findings, and Impacts.

Genomics Proteomics Bioinformatics 2017 10 12;15(5):287-300. Epub 2017 Oct 12.

State Key Laboratory of Genetic Engineering & MOE Key Laboratory of Contemporary Anthropology, Collaborative Innovation Center of Genetics and Development, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai 200438, China. Electronic address:

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http://dx.doi.org/10.1016/j.gpb.2017.06.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5673674PMC
October 2017

Oroxylin A suppresses the development and growth of colorectal cancer through reprogram of HIF1α-modulated fatty acid metabolism.

Cell Death Dis 2017 06 8;8(6):e2865. Epub 2017 Jun 8.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, Department of Basic Medicine, School of Basic Medicine and Clinical Pharmacy, China Pharmaceutical University, 24 Tongjiaxiang, Nanjing, China.

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http://dx.doi.org/10.1038/cddis.2017.261DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520917PMC
June 2017

Dynamic landscape of alternative polyadenylation during retinal development.

Cell Mol Life Sci 2017 05 18;74(9):1721-1739. Epub 2016 Dec 18.

State Key Laboratory of Ophthalmology, Guangdong Provincial Key Laboratory of Ophthalmology and Visual Science, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou, 500040, China.

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http://dx.doi.org/10.1007/s00018-016-2429-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5380485PMC
May 2017

An episomal vector-based CRISPR/Cas9 system for highly efficient gene knockout in human pluripotent stem cells.

Sci Rep 2017 05 24;7(1):2320. Epub 2017 May 24.

The State Key Laboratory of Genetic Engineering and MOE Key Laboratory of Contemporary Anthropology, School of Life Sciences, Fudan University, Shanghai, 200438, China.

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http://dx.doi.org/10.1038/s41598-017-02456-yDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5443789PMC
May 2017

Snail1-dependent p53 repression regulates expansion and activity of tumour-initiating cells in breast cancer.

Nat Cell Biol 2016 Nov 17;18(11):1221-1232. Epub 2016 Oct 17.

Division of Molecular Medicine and Genetics, Department of Internal Medicine, The Life Sciences Institute, University of Michigan, Ann Arbor, Michigan 48109, USA.

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http://dx.doi.org/10.1038/ncb3425DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6038146PMC
November 2016

Expression dynamics, relationships, and transcriptional regulations of diverse transcripts in mouse spermatogenic cells.

RNA Biol 2016 Oct 25;13(10):1011-1024. Epub 2016 Aug 25.

a State Key Laboratory of Stem Cell and Reproductive Biology, Institute of Zoology, Chinese Academy of Sciences , Beijing , China.

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http://dx.doi.org/10.1080/15476286.2016.1218588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5056783PMC
October 2016

FV-429 induces apoptosis and inhibits glycolysis by inhibiting Akt-mediated phosphorylation of hexokinase II in MDA-MB-231 cells.

Mol Carcinog 2016 09 10;55(9):1317-28. Epub 2015 Aug 10.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, Key Laboratory of Drug Quality Control and Pharmacovigilance, JiangSu Key Laboratory of Drug Design and Optimization, China Pharmaceutical University, Nanjing, P. R. China.

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http://dx.doi.org/10.1002/mc.22374DOI Listing
September 2016

Global intron retention mediated gene regulation during CD4+ T cell activation.

Nucleic Acids Res 2016 08 1;44(14):6817-29. Epub 2016 Jul 1.

Systems Biology Center, National Heart Lung and Blood Institute, National Institutes of Health, Bethesda, MD 20892, USA

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http://dx.doi.org/10.1093/nar/gkw591DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5001615PMC
August 2016

CCL20 mediates RANK/RANKL-induced epithelial-mesenchymal transition in endometrial cancer cells.

Oncotarget 2016 May;7(18):25328-39

Laboratory for Gynecologic Oncology, International Peace Maternity and Child Health Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai, China.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5041907PMC
http://dx.doi.org/10.18632/oncotarget.8291DOI Listing
May 2016

PA-seq for Global Identification of RNA Polyadenylation Sites of Kaposi's Sarcoma-Associated Herpesvirus Transcripts.

Curr Protoc Microbiol 2016 05 6;41:14E.7.1-14E.7.18. Epub 2016 May 6.

Systems Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health, Bethesda, Maryland.

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http://dx.doi.org/10.1002/cpmc.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4910627PMC
May 2016

SET DOMAIN GROUP 708, a histone H3 lysine 36-specific methyltransferase, controls flowering time in rice (Oryza sativa).

New Phytol 2016 Apr 7;210(2):577-88. Epub 2015 Dec 7.

State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, International Associated Laboratory of CNRS-Fudan-HUNAU on Plant Epigenome Research, Institute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, 200433, China.

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http://dx.doi.org/10.1111/nph.13768DOI Listing
April 2016

Oroxylin A modulates mitochondrial function and apoptosis in human colon cancer cells by inducing mitochondrial translocation of wild-type p53.

Oncotarget 2016 Mar;7(13):17009-20

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, China Pharmaceutical University, Nanjing 210009, People's Republic of China.

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http://www.oncotarget.com/fulltext/7927
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http://dx.doi.org/10.18632/oncotarget.7927DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4941367PMC
March 2016

An intriguing RNA species--perspectives of circularized RNA.

Protein Cell 2015 Dec 8;6(12):871-80. Epub 2015 Sep 8.

MOE Key Laboratory of Contemporary Anthropology & State Key Laboratory of Genetics Engineering, Collaborative Innovation Center of Genetics and Development, School of Life Sciences, Fudan University, Shanghai, 200433, China.

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http://dx.doi.org/10.1007/s13238-015-0202-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4656206PMC
December 2015

RNA polymerase II-associated factor 1 regulates the release and phosphorylation of paused RNA polymerase II.

Science 2015 Dec;350(6266):1383-6

Laboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York, NY 10065, USA.

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http://dx.doi.org/10.1126/science.aad2338DOI Listing
December 2015

A novel role of CDX1 in embryonic epicardial development.

PLoS One 2014 28;9(7):e103271. Epub 2014 Jul 28.

Shanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences and School of Life Sciences, East China Normal University, Shanghai, China.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0103271PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4113346PMC
November 2015

MitoRCA-seq reveals unbalanced cytocine to thymine transition in Polg mutant mice.

Sci Rep 2015 Jul 27;5:12049. Epub 2015 Jul 27.

Genetics and Development Biology Center, National Heart Lung Blood Institute, National Institutes of Health, Bethesda, Maryland 20892, USA.

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http://dx.doi.org/10.1038/srep12049DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4648470PMC
July 2015

Lactate promotes PGE2 synthesis and gluconeogenesis in monocytes to benefit the growth of inflammation-associated colorectal tumor.

Oncotarget 2015 Jun;6(18):16198-214

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, China Pharmaceutical University, Nanjing, The People's Republic of China.

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http://www.oncotarget.com/fulltext/3838
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4594635PMC
http://dx.doi.org/10.18632/oncotarget.3838DOI Listing
June 2015

Oroxylin A promotes PTEN-mediated negative regulation of MDM2 transcription via SIRT3-mediated deacetylation to stabilize p53 and inhibit glycolysis in wt-p53 cancer cells.

J Hematol Oncol 2015 Apr 23;8:41. Epub 2015 Apr 23.

State Key Laboratory of Natural Medicines, Jiangsu Key Laboratory of Carcinogenesis and Intervention, China Pharmaceutical University, 24 Tongjiaxiang, Nanjing, 210009, The People's Republic of China.

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http://dx.doi.org/10.1186/s13045-015-0137-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4419472PMC
April 2015

A viral genome landscape of RNA polyadenylation from KSHV latent to lytic infection.

PLoS Pathog 2013 14;9(11):e1003749. Epub 2013 Nov 14.

Tumor Virus RNA Biology Section, Gene Regulation and Chromosome Biology Laboratory, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1003749DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3828183PMC
June 2014

Genome sequencing accuracy by RCA-seq versus long PCR template cloning and sequencing in identification of human papillomavirus type 58.

Cell Biosci 2014 Jan 13;4(1). Epub 2014 Jan 13.

Tumor Virus RNA Biology Section, Gene Regulation and Chromosome Biology Laboratory, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.

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http://dx.doi.org/10.1186/2045-3701-4-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3903022PMC
January 2014

Distinct polyadenylation landscapes of diverse human tissues revealed by a modified PA-seq strategy.

BMC Genomics 2013 Sep 11;14:615. Epub 2013 Sep 11.

National Heart Lung Blood Institute, National Institutes of Health, Genetics and Development Biology Center, 9000 Rockville Pike, Bethesda, MD, 20892, USA.

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http://dx.doi.org/10.1186/1471-2164-14-615DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3848854PMC
September 2013

Human papillomavirus type 58 genome variations and RNA expression in cervical lesions.

J Virol 2013 Aug 19;87(16):9313-22. Epub 2013 Jun 19.

Tumor Virus RNA Biology Section, Gene Regulation and Chromosome Biology Laboratory, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1128/JVI.01154-13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3754072PMC
August 2013

Genome-wide identification and predictive modeling of tissue-specific alternative polyadenylation.

Bioinformatics 2013 Jul;29(13):i108-16

Department of Computer Science, Duke University, Durham, NC 27708, USA.

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http://dx.doi.org/10.1093/bioinformatics/btt233DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3694680PMC
July 2013

Histone H2B ubiquitin ligase RNF20 is required for MLL-rearranged leukemia.

Proc Natl Acad Sci U S A 2013 Mar 14;110(10):3901-6. Epub 2013 Feb 14.

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA.

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http://dx.doi.org/10.1073/pnas.1301045110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3593849PMC
March 2013

Integrative analysis of the zinc finger transcription factor Lame duck in the Drosophila myogenic gene regulatory network.

Proc Natl Acad Sci U S A 2012 Dec 26;109(50):20768-73. Epub 2012 Nov 26.

Laboratory of Developmental Systems Biology, National Heart Lung and Blood Institute, National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1073/pnas.1210415109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3528522PMC
December 2012

Ancient gene transfer from algae to animals: mechanisms and evolutionary significance.

BMC Evol Biol 2012 Jun 12;12:83. Epub 2012 Jun 12.

State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan, 650223, China.

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http://dx.doi.org/10.1186/1471-2148-12-83DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3494510PMC
June 2012

Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin level.

PLoS Genet 2011 Jan 13;7(1):e1001274. Epub 2011 Jan 13.

Program in Computational Biology and Bioinformatics, Duke University, Durham, North Carolina, United States of America.

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http://dx.plos.org/10.1371/journal.pgen.1001274
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http://dx.doi.org/10.1371/journal.pgen.1001274DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3020932PMC
January 2011

The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe.

PLoS One 2010 Dec 20;5(12):e15271. Epub 2010 Dec 20.

Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0015271PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3004915PMC
December 2010

A paired-end sequencing strategy to map the complex landscape of transcription initiation.

Nat Methods 2010 Jul 23;7(7):521-7. Epub 2010 May 23.

Institute for Genome Sciences and Policy, Duke University Medical Center, Durham, North Carolina, USA.

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http://www.nature.com/articles/nmeth.1464
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http://dx.doi.org/10.1038/nmeth.1464DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3197272PMC
July 2010

Selective gene amplification for high-throughput sequencing.

Recent Pat DNA Gene Seq 2009 ;3(1):29-38

Institute for Genome Sciences & Policy, Department of Cell Biology, Duke University Medical Center, 101 Science Drive, Durham, NC 27708, USA.

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February 2009

Computational analysis of the relationship between allergenicity and digestibility of allergenic proteins in simulated gastric fluid.

BMC Bioinformatics 2007 Oct 9;8:375. Epub 2007 Oct 9.

College of Life Sciences, National Lab of Protein Engineering and Genetic Engineering of Plants, Peking University, Beijing 100871, PR China.

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http://bmcbioinformatics.biomedcentral.com/articles/10.1186/
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http://dx.doi.org/10.1186/1471-2105-8-375DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2099448PMC
October 2007

Oral route of mini-proinsulin-expressing Ganoderma lucidum decreases blood glucose level in streptozocin-induced diabetic rats.

Int J Mol Med 2007 Jul;20(1):45-51

National Laboratory of Protein Engineering and Plant Genetic Engineering, College of Life Sciences, Peking University, Beijing, PR China.

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July 2007

The ubiquitin ligase ability of IAPs regulates apoptosis.

IUBMB Life 2005 Dec;57(12):779-85

College of Life Science, Sichuan University, Sichuan Province, P. R. China.

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December 2005

Promoter of the rolC gene of Agrobacterium rhizogenes can be strongly regulated in glandular cell of transgenic tobacco.

Mol Biotechnol 2003 Jun;24(2):121-6

Life Sciences Center, College of Life Science, Peking University, Beijing 100871, China.

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http://link.springer.com/10.1385/MB:24:2:121
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June 2003