Timothy I Shaw

Timothy I Shaw

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Timothy I Shaw

Timothy I Shaw

Publications by authors named "Timothy I Shaw"

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A Key Role for the Ubiquitin Ligase UBR4 in Myofiber Hypertrophy in Drosophila and Mice.

Cell Rep 2019 Jul;28(5):1268-1281.e6

Division of Developmental Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA; Department of Developmental Neurobiology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, USA. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2019.06.094DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6697171PMC
July 2019

ULK1 and ULK2 Regulate Stress Granule Disassembly Through Phosphorylation and Activation of VCP/p97.

Mol Cell 2019 05 9;74(4):742-757.e8. Epub 2019 Apr 9.

Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA; Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA. Electronic address:

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http://dx.doi.org/10.1016/j.molcel.2019.03.027DOI Listing
May 2019

Identification of Therapeutic Targets in Rhabdomyosarcoma through Integrated Genomic, Epigenomic, and Proteomic Analyses.

Cancer Cell 2018 09 23;34(3):411-426.e19. Epub 2018 Aug 23.

Department of Developmental Neurobiology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, MS 323, Memphis, TN 38105-3678, USA; Department of Ophthalmology, University of Tennessee Health Science Center, Memphis, TN 38105, USA; Howard Hughes Medical Institute, Chevy Chase, MD 20815, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ccell.2018.07.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6158019PMC
September 2018

C9orf72 Dipeptide Repeats Impair the Assembly, Dynamics, and Function of Membrane-Less Organelles.

Cell 2016 Oct;167(3):774-788.e17

Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA; Howard Hughes Medical Institute, Department of Cell and Molecular Biology, St Jude Children's Research Hospital, Memphis, TN 38105, USA. Electronic address:

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5079111PMC
http://dx.doi.org/10.1016/j.cell.2016.10.002DOI Listing
October 2016

Rapid Microbiome Changes in Freshly Deposited Cow Feces under Field Conditions.

Front Microbiol 2016 13;7:500. Epub 2016 Apr 13.

Ecosystems Research Division, United States Environmental Protection Agency, Athens GA, USA.

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http://dx.doi.org/10.3389/fmicb.2016.00500DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4830129PMC
May 2016

STRAW: Species TRee Analysis Web server.

Nucleic Acids Res 2013 Jul 9;41(Web Server issue):W238-41. Epub 2013 May 9.

Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA.

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http://dx.doi.org/10.1093/nar/gkt377DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3692081PMC
July 2013

HIV N-linked glycosylation site analyzer and its further usage in anchored alignment.

Nucleic Acids Res 2013 Jul 8;41(Web Server issue):W454-8. Epub 2013 Jun 8.

Institute of Bioinformatics, University of Georgia, GA 30605, USA.

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http://dx.doi.org/10.1093/nar/gkt472DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3692120PMC
July 2013

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species.

Gigascience 2013 Jul 22;2(1):10. Epub 2013 Jul 22.

Genome Center, UC, Davis, CA 95616, USA.

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http://dx.doi.org/10.1186/2047-217X-2-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3844414PMC
July 2013

Information-theoretic uncertainty of SCFG-modeled folding space of the non-coding RNA.

J Theor Biol 2013 Feb 14;318:140-63. Epub 2012 Nov 14.

Institute of Bioinformatics, University of Georgia, Davison Life Sciences Bldg, Room B118B, 120 Green St, Athens, GA 30602, USA.

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http://dx.doi.org/10.1016/j.jtbi.2012.10.023DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3538908PMC
February 2013

Transcriptome analysis of a North American songbird, Melospiza melodia.

DNA Res 2012 29;19(4):325-33. Epub 2012 May 29.

Institute of Bioinformatics, Davidson Life Sciences, University of Georgia, Athens, 30602, USA.

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http://dx.doi.org/10.1093/dnares/dss015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3415294PMC
November 2012

Stable stem enabled Shannon entropies distinguish non-coding RNAs from random backgrounds.

BMC Bioinformatics 2012 Apr 12;13 Suppl 5:S1. Epub 2012 Apr 12.

Department of Computer Science, University of Georgia, Athens, Georgia 30602, USA.

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http://dx.doi.org/10.1186/1471-2105-13-S5-S1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3358654PMC
April 2012

RNApasta: a tool for analysis of RNA structural alignments.

Int J Bioinform Res Appl 2010 ;6(6):571-83

Department of Plant Biology, University of Georgia, Athens, GA 30602, USA.

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http://dx.doi.org/10.1504/IJBRA.2010.038738DOI Listing
June 2011

Analyzing modular RNA structure reveals low global structural entropy in microRNA sequence.

J Bioinform Comput Biol 2011 Apr;9(2):283-98

Institute of Bioinformatics, University of Georgia, Athens, GA 30602, USA.

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April 2011