Thomas J Melia

Thomas J Melia

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Thomas J Melia

Thomas J Melia

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Delipidation of mammalian Atg8-family proteins by each of the four ATG4 proteases.

Authors:
Karlina J Kauffman Shenliang Yu Jiaxin Jin Brian Mugo Nathan Nguyen Aidan O'Brien Shanta Nag Alf Håkon Lystad Thomas J Melia

Autophagy 2018 10;14(6):992-1010. Epub 2018 Apr 10.

a Department of Cell Biology , Yale University School of Medicine , New Haven , CT , USA.

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https://www.tandfonline.com/doi/full/10.1080/15548627.2018.1
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http://dx.doi.org/10.1080/15548627.2018.1437341DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6103404PMC
October 2019

ATG2 transports lipids to promote autophagosome biogenesis.

Authors:
Diana P Valverde Shenliang Yu Venkata Boggavarapu Nikit Kumar Joshua A Lees Thomas Walz Karin M Reinisch Thomas J Melia

J Cell Biol 2019 Jun 5;218(6):1787-1798. Epub 2019 Apr 5.

Department of Cell Biology, Yale University School of Medicine, New Haven, CT

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http://dx.doi.org/10.1083/jcb.201811139DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6548141PMC
June 2019

Maturation and Clearance of Autophagosomes in Neurons Depends on a Specific Cysteine Protease Isoform, ATG-4.2.

Authors:
Sarah E Hill Karlina J Kauffman Mia Krout Janet E Richmond Thomas J Melia Daniel A Colón-Ramos

Dev Cell 2019 04 14;49(2):251-266.e8. Epub 2019 Mar 14.

Department of Neuroscience, Program in Cellular Neuroscience, Neurodegeneration and Repair, Yale University School of Medicine, New Haven, CT 06510, USA; Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06510, USA; Instituto de Neurobiología, Recinto de Ciencias Médicas, Universidad de Puerto Rico, 201 Blvd del Valle, San Juan 00901, Puerto Rico. Electronic address:

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http://dx.doi.org/10.1016/j.devcel.2019.02.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6482087PMC
April 2019

Distinct functions of ATG16L1 isoforms in membrane binding and LC3B lipidation in autophagy-related processes.

Authors:
Alf Håkon Lystad Sven R Carlsson Laura R de la Ballina Karlina J Kauffman Shanta Nag Tamotsu Yoshimori Thomas J Melia Anne Simonsen

Nat Cell Biol 2019 03 18;21(3):372-383. Epub 2019 Feb 18.

Department of Molecular Medicine, Institute of Basic Medical Sciences, Faculty of Medicine, University of Oslo, Oslo, Norway.

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http://dx.doi.org/10.1038/s41556-019-0274-9DOI Listing
March 2019

A Programmable DNA Origami Platform for Organizing Intrinsically Disordered Nucleoporins within Nanopore Confinement.

Authors:
Patrick D Ellis Fisher Qi Shen Bernice Akpinar Luke K Davis Kenny Kwok Hin Chung David Baddeley Anđela Šarić Thomas J Melia Bart W Hoogenboom Chenxiang Lin C Patrick Lusk

ACS Nano 2018 02 25;12(2):1508-1518. Epub 2018 Jan 25.

Department of Cell Biology, Yale School of Medicine , New Haven, Connecticut 06520, United States.

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http://dx.doi.org/10.1021/acsnano.7b08044DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5834394PMC
February 2018

The coordination of membrane fission and fusion at the end of autophagosome maturation.

Authors:
Shenliang Yu Thomas J Melia

Curr Opin Cell Biol 2017 08 29;47:92-98. Epub 2017 Apr 29.

Department of Cell Biology, Yale University School of Medicine, New Haven, CT, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ceb.2017.03.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5537011PMC
August 2017

Sensing Membrane Curvature in Macroautophagy.

Authors:
Nathan Nguyen Vladimir Shteyn Thomas J Melia

J Mol Biol 2017 02 11;429(4):457-472. Epub 2017 Jan 11.

Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06520, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jmb.2017.01.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5276735PMC
February 2017

HS1BP3 negatively regulates autophagy by modulation of phosphatidic acid levels.

Authors:
Petter Holland Helene Knævelsrud Kristiane Søreng Benan J Mathai Alf Håkon Lystad Serhiy Pankiv Gunnveig T Bjørndal Sebastian W Schultz Viola H Lobert Robin B Chan Bowen Zhou Knut Liestøl Sven R Carlsson Thomas J Melia Gilbert Di Paolo Anne Simonsen

Nat Commun 2016 12 22;7:13889. Epub 2016 Dec 22.

Department of Molecular Medicine, Institute of Basic Medical Sciences, University of Oslo, PO Box 1112, 0317 Oslo, Norway.

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http://dx.doi.org/10.1038/ncomms13889DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5412012PMC
December 2016

The Legionella Anti-autophagy Effector RavZ Targets the Autophagosome via PI3P- and Curvature-Sensing Motifs.

Authors:
Florian A Horenkamp Karlina J Kauffman Lara J Kohler Racquel K Sherwood Kathryn P Krueger Vladimir Shteyn Craig R Roy Thomas J Melia Karin M Reinisch

Dev Cell 2015 Sep 3;34(5):569-76. Epub 2015 Sep 3.

Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06520, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S15345807150052
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http://dx.doi.org/10.1016/j.devcel.2015.08.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4594837PMC
September 2015

Lipidation of the autophagy proteins LC3 and GABARAP is a membrane-curvature dependent process.

Authors:
Julia Dancourt Thomas J Melia

Autophagy 2014 Aug 12;10(8):1470-1. Epub 2014 Jun 12.

Department of Cell Biology; Yale University School of Medicine; New Haven, CT USA.

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http://dx.doi.org/10.4161/auto.29468DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4203524PMC
August 2014

Lipidation of the LC3/GABARAP family of autophagy proteins relies on a membrane-curvature-sensing domain in Atg3.

Authors:
Sangeeta Nath Julia Dancourt Vladimir Shteyn Gabriella Puente Wendy M Fong Shanta Nag Joerg Bewersdorf Ai Yamamoto Bruno Antonny Thomas J Melia

Nat Cell Biol 2014 May 20;16(5):415-24. Epub 2014 Apr 20.

Department of Cell Biology, Yale University School of Medicine, New Haven, Connecticut 06510, USA.

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http://www.nature.com/articles/ncb2940
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http://dx.doi.org/10.1038/ncb2940DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4111135PMC
May 2014

The Legionella effector RavZ inhibits host autophagy through irreversible Atg8 deconjugation.

Authors:
Augustine Choy Julia Dancourt Brian Mugo Tamara J O'Connor Ralph R Isberg Thomas J Melia Craig R Roy

Science 2012 Nov 25;338(6110):1072-6. Epub 2012 Oct 25.

Department of Microbial Pathogenesis, Yale University School of Medicine, New Haven, CT, USA.

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http://dx.doi.org/10.1126/science.1227026DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3682818PMC
November 2012

Modulating macroautophagy: a neuronal perspective.

Authors:
Christopher W Johnson Thomas J Melia Ai Yamamoto

Future Med Chem 2012 Sep;4(13):1715-31

Department of Neurology, College of Physician & Surgeons, Columbia University, NY, USA.

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http://dx.doi.org/10.4155/fmc.12.112DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3566761PMC
September 2012

Approaches to the study of Atg8-mediated membrane dynamics in vitro.

Authors:
Anjali Jotwani Diana N Richerson Isabelle Motta Omar Julca-Zevallos Thomas J Melia

Methods Cell Biol 2012 ;108:93-116

Department of Cell Biology, Yale School of Medicine, Connecticut, USA.

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http://linkinghub.elsevier.com/retrieve/pii/B978012386487100
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http://dx.doi.org/10.1016/B978-0-12-386487-1.00005-5DOI Listing
May 2012

Guidelines for the use and interpretation of assays for monitoring autophagy.

Authors:
Daniel J Klionsky Fabio C Abdalla Hagai Abeliovich Robert T Abraham Abraham Acevedo-Arozena Khosrow Adeli Lotta Agholme Maria Agnello Patrizia Agostinis Julio A Aguirre-Ghiso Hyung Jun Ahn Ouardia Ait-Mohamed Slimane Ait-Si-Ali Takahiko Akematsu Shizuo Akira Hesham M Al-Younes Munir A Al-Zeer Matthew L Albert Roger L Albin Javier Alegre-Abarrategui Maria Francesca Aleo Mehrdad Alirezaei Alexandru Almasan Maylin Almonte-Becerril Atsuo Amano Ravi Amaravadi Shoba Amarnath Amal O Amer Nathalie Andrieu-Abadie Vellareddy Anantharam David K Ann Shailendra Anoopkumar-Dukie Hiroshi Aoki Nadezda Apostolova Giuseppe Arancia John P Aris Katsuhiko Asanuma Nana Y O Asare Hisashi Ashida Valerie Askanas David S Askew Patrick Auberger Misuzu Baba Steven K Backues Eric H Baehrecke Ben A Bahr Xue-Yuan Bai Yannick Bailly Robert Baiocchi Giulia Baldini Walter Balduini Andrea Ballabio Bruce A Bamber Edward T W Bampton Gábor Bánhegyi Clinton R Bartholomew Diane C Bassham Robert C Bast Henri Batoko Boon-Huat Bay Isabelle Beau Daniel M Béchet Thomas J Begley Christian Behl Christian Behrends Soumeya Bekri Bryan Bellaire Linda J Bendall Luca Benetti Laura Berliocchi Henri Bernardi Francesca Bernassola Sébastien Besteiro Ingrid Bhatia-Kissova Xiaoning Bi Martine Biard-Piechaczyk Janice S Blum Lawrence H Boise Paolo Bonaldo David L Boone Beat C Bornhauser Karina R Bortoluci Ioannis Bossis Frédéric Bost Jean-Pierre Bourquin Patricia Boya Michaël Boyer-Guittaut Peter V Bozhkov Nathan R Brady Claudio Brancolini Andreas Brech Jay E Brenman Ana Brennand Emery H Bresnick Patrick Brest Dave Bridges Molly L Bristol Paul S Brookes Eric J Brown John H Brumell Nicola Brunetti-Pierri Ulf T Brunk Dennis E Bulman Scott J Bultman Geert Bultynck Lena F Burbulla Wilfried Bursch Jonathan P Butchar Wanda Buzgariu Sergio P Bydlowski Ken Cadwell Monika Cahová Dongsheng Cai Jiyang Cai Qian Cai Bruno Calabretta Javier Calvo-Garrido Nadine Camougrand Michelangelo Campanella Jenny Campos-Salinas Eleonora Candi Lizhi Cao Allan B Caplan Simon R Carding Sandra M Cardoso Jennifer S Carew Cathleen R Carlin Virginie Carmignac Leticia A M Carneiro Serena Carra Rosario A Caruso Giorgio Casari Caty Casas Roberta Castino Eduardo Cebollero Francesco Cecconi Jean Celli Hassan Chaachouay Han-Jung Chae Chee-Yin Chai David C Chan Edmond Y Chan Raymond Chuen-Chung Chang Chi-Ming Che Ching-Chow Chen Guang-Chao Chen Guo-Qiang Chen Min Chen Quan Chen Steve S-L Chen WenLi Chen Xi Chen Xiangmei Chen Xiequn Chen Ye-Guang Chen Yingyu Chen Yongqiang Chen Yu-Jen Chen Zhixiang Chen Alan Cheng Christopher H K Cheng Yan Cheng Heesun Cheong Jae-Ho Cheong Sara Cherry Russ Chess-Williams Zelda H Cheung Eric Chevet Hui-Ling Chiang Roberto Chiarelli Tomoki Chiba Lih-Shen Chin Shih-Hwa Chiou Francis V Chisari Chi Hin Cho Dong-Hyung Cho Augustine M K Choi DooSeok Choi Kyeong Sook Choi Mary E Choi Salem Chouaib Divaker Choubey Vinay Choubey Charleen T Chu Tsung-Hsien Chuang Sheau-Huei Chueh Taehoon Chun Yong-Joon Chwae Mee-Len Chye Roberto Ciarcia Maria R Ciriolo Michael J Clague Robert S B Clark Peter G H Clarke Robert Clarke Patrice Codogno Hilary A Coller María I Colombo Sergio Comincini Maria Condello Fabrizio Condorelli Mark R Cookson Graham H Coombs Isabelle Coppens Ramon Corbalan Pascale Cossart Paola Costelli Safia Costes Ana Coto-Montes Eduardo Couve Fraser P Coxon James M Cregg José L Crespo Marianne J Cronjé Ana Maria Cuervo Joseph J Cullen Mark J Czaja Marcello D'Amelio Arlette Darfeuille-Michaud Lester M Davids Faith E Davies Massimo De Felici John F de Groot Cornelis A M de Haan Luisa De Martino Angelo De Milito Vincenzo De Tata Jayanta Debnath Alexei Degterev Benjamin Dehay Lea M D Delbridge Francesca Demarchi Yi Zhen Deng Jörn Dengjel Paul Dent Donna Denton Vojo Deretic Shyamal D Desai Rodney J Devenish Mario Di Gioacchino Gilbert Di Paolo Chiara Di Pietro Guillermo Díaz-Araya Inés Díaz-Laviada Maria T Diaz-Meco Javier Diaz-Nido Ivan Dikic Savithramma P Dinesh-Kumar Wen-Xing Ding Clark W Distelhorst Abhinav Diwan Mojgan Djavaheri-Mergny Svetlana Dokudovskaya Zheng Dong Frank C Dorsey Victor Dosenko James J Dowling Stephen Doxsey Marlène Dreux Mark E Drew Qiuhong Duan Michel A Duchosal Karen Duff Isabelle Dugail Madeleine Durbeej Michael Duszenko Charles L Edelstein Aimee L Edinger Gustavo Egea Ludwig Eichinger N Tony Eissa Suhendan Ekmekcioglu Wafik S El-Deiry Zvulun Elazar Mohamed Elgendy Lisa M Ellerby Kai Er Eng Anna-Mart Engelbrecht Simone Engelender Jekaterina Erenpreisa Ricardo Escalante Audrey Esclatine Eeva-Liisa Eskelinen Lucile Espert Virginia Espina Huizhou Fan Jia Fan Qi-Wen Fan Zhen Fan Shengyun Fang Yongqi Fang Manolis Fanto Alessandro Fanzani Thomas Farkas Jean-Claude Farré Mathias Faure Marcus Fechheimer Carl G Feng Jian Feng Qili Feng Youji Feng László Fésüs Ralph Feuer Maria E Figueiredo-Pereira Gian Maria Fimia Diane C Fingar Steven Finkbeiner Toren Finkel Kim D Finley Filomena Fiorito Edward A Fisher Paul B Fisher Marc Flajolet Maria L Florez-McClure Salvatore Florio Edward A Fon Francesco Fornai Franco Fortunato Rati Fotedar Daniel H Fowler Howard S Fox Rodrigo Franco Lisa B Frankel Marc Fransen José M Fuentes Juan Fueyo Jun Fujii Kozo Fujisaki Eriko Fujita Mitsunori Fukuda Ruth H Furukawa Matthias Gaestel Philippe Gailly Malgorzata Gajewska Brigitte Galliot Vincent Galy Subramaniam Ganesh Barry Ganetzky Ian G Ganley Fen-Biao Gao George F Gao Jinming Gao Lorena Garcia Guillermo Garcia-Manero Mikel Garcia-Marcos Marjan Garmyn Andrei L Gartel Evelina Gatti Mathias Gautel Thomas R Gawriluk Matthew E Gegg Jiefei Geng Marc Germain Jason E Gestwicki David A Gewirtz Saeid Ghavami Pradipta Ghosh Anna M Giammarioli Alexandra N Giatromanolaki Spencer B Gibson Robert W Gilkerson Michael L Ginger Henry N Ginsberg Jakub Golab Michael S Goligorsky Pierre Golstein Candelaria Gomez-Manzano Ebru Goncu Céline Gongora Claudio D Gonzalez Ramon Gonzalez Cristina González-Estévez Rosa Ana González-Polo Elena Gonzalez-Rey Nikolai V Gorbunov Sharon Gorski Sandro Goruppi Roberta A Gottlieb Devrim Gozuacik Giovanna Elvira Granato Gary D Grant Kim N Green Aleš Gregorc Frédéric Gros Charles Grose Thomas W Grunt Philippe Gual Jun-Lin Guan Kun-Liang Guan Sylvie M Guichard Anna S Gukovskaya Ilya Gukovsky Jan Gunst Asa B Gustafsson Andrew J Halayko Amber N Hale Sandra K Halonen Maho Hamasaki Feng Han Ting Han Michael K Hancock Malene Hansen Hisashi Harada Masaru Harada Stefan E Hardt J Wade Harper Adrian L Harris James Harris Steven D Harris Makoto Hashimoto Jeffrey A Haspel Shin-ichiro Hayashi Lori A Hazelhurst Congcong He You-Wen He Marie-Joseé Hébert Kim A Heidenreich Miep H Helfrich Gudmundur V Helgason Elizabeth P Henske Brian Herman Paul K Herman Claudio Hetz Sabine Hilfiker Joseph A Hill Lynne J Hocking Paul Hofman Thomas G Hofmann Jörg Höhfeld Tessa L Holyoake Ming-Huang Hong David A Hood Gökhan S Hotamisligil Ewout J Houwerzijl Maria Høyer-Hansen Bingren Hu Chien-An A Hu Hong-Ming Hu Ya Hua Canhua Huang Ju Huang Shengbing Huang Wei-Pang Huang Tobias B Huber Won-Ki Huh Tai-Ho Hung Ted R Hupp Gang Min Hur James B Hurley Sabah N A Hussain Patrick J Hussey Jung Jin Hwang Seungmin Hwang Atsuhiro Ichihara Shirin Ilkhanizadeh Ken Inoki Takeshi Into Valentina Iovane Juan L Iovanna Nancy Y Ip Yoshitaka Isaka Hiroyuki Ishida Ciro Isidoro Ken-ichi Isobe Akiko Iwasaki Marta Izquierdo Yotaro Izumi Panu M Jaakkola Marja Jäättelä George R Jackson William T Jackson Bassam Janji Marina Jendrach Ju-Hong Jeon Eui-Bae Jeung Hong Jiang Hongchi Jiang Jean X Jiang Ming Jiang Qing Jiang Xuejun Jiang Xuejun Jiang Alberto Jiménez Meiyan Jin Shengkan Jin Cheol O Joe Terje Johansen Daniel E Johnson Gail V W Johnson Nicola L Jones Bertrand Joseph Suresh K Joseph Annie M Joubert Gábor Juhász Lucienne Juillerat-Jeanneret Chang Hwa Jung Yong-Keun Jung Kai Kaarniranta Allen Kaasik Tomohiro Kabuta Motoni Kadowaki Katarina Kagedal Yoshiaki Kamada Vitaliy O Kaminskyy Harm H Kampinga Hiromitsu Kanamori Chanhee Kang Khong Bee Kang Kwang Il Kang Rui Kang Yoon-A Kang Tomotake Kanki Thirumala-Devi Kanneganti Haruo Kanno Anumantha G Kanthasamy Arthi Kanthasamy Vassiliki Karantza Gur P Kaushal Susmita Kaushik Yoshinori Kawazoe Po-Yuan Ke John H Kehrl Ameeta Kelekar Claus Kerkhoff David H Kessel Hany Khalil Jan A K W Kiel Amy A Kiger Akio Kihara Deok Ryong Kim Do-Hyung Kim Dong-Hou Kim Eun-Kyoung Kim Hyung-Ryong Kim Jae-Sung Kim Jeong Hun Kim Jin Cheon Kim John K Kim Peter K Kim Seong Who Kim Yong-Sun Kim Yonghyun Kim Adi Kimchi Alec C Kimmelman Jason S King Timothy J Kinsella Vladimir Kirkin Lorrie A Kirshenbaum Katsuhiko Kitamoto Kaio Kitazato Ludger Klein Walter T Klimecki Jochen Klucken Erwin Knecht Ben C B Ko Jan C Koch Hiroshi Koga Jae-Young Koh Young Ho Koh Masato Koike Masaaki Komatsu Eiki Kominami Hee Jeong Kong Wei-Jia Kong Viktor I Korolchuk Yaichiro Kotake Michael I Koukourakis Juan B Kouri Flores Attila L Kovács Claudine Kraft Dimitri Krainc Helmut Krämer Carole Kretz-Remy Anna M Krichevsky Guido Kroemer Rejko Krüger Oleg Krut Nicholas T Ktistakis Chia-Yi Kuan Roza Kucharczyk Ashok Kumar Raj Kumar Sharad Kumar Mondira Kundu Hsing-Jien Kung Tino Kurz Ho Jeong Kwon Albert R La Spada Frank Lafont Trond Lamark Jacques Landry Jon D Lane Pierre Lapaquette Jocelyn F Laporte Lajos László Sergio Lavandero Josée N Lavoie Robert Layfield Pedro A Lazo Weidong Le Laurent Le Cam Daniel J Ledbetter Alvin J X Lee Byung-Wan Lee Gyun Min Lee Jongdae Lee Ju-Hyun Lee Michael Lee Myung-Shik Lee Sug Hyung Lee Christiaan Leeuwenburgh Patrick Legembre Renaud Legouis Michael Lehmann Huan-Yao Lei Qun-Ying Lei David A Leib José Leiro John J Lemasters Antoinette Lemoine Maciej S Lesniak Dina Lev Victor V Levenson Beth Levine Efrat Levy Faqiang Li Jun-Lin Li Lian Li Sheng Li Weijie Li Xue-Jun Li Yan-bo Li Yi-Ping Li Chengyu Liang Qiangrong Liang Yung-Feng Liao Pawel P Liberski Andrew Lieberman Hyunjung J Lim Kah-Leong Lim Kyu Lim Chiou-Feng Lin Fu-Cheng Lin Jian Lin Jiandie D Lin Kui Lin Wan-Wan Lin Weei-Chin Lin Yi-Ling Lin Rafael Linden Paul Lingor Jennifer Lippincott-Schwartz Michael P Lisanti Paloma B Liton Bo Liu Chun-Feng Liu Kaiyu Liu Leyuan Liu Qiong A Liu Wei Liu Young-Chau Liu Yule Liu Richard A Lockshin Chun-Nam Lok Sagar Lonial Benjamin Loos Gabriel Lopez-Berestein Carlos López-Otín Laura Lossi Michael T Lotze Peter Lőw Binfeng Lu Bingwei Lu Bo Lu Zhen Lu Frédéric Luciano Nicholas W Lukacs Anders H Lund Melinda A Lynch-Day Yong Ma Fernando Macian Jeff P MacKeigan Kay F Macleod Frank Madeo Luigi Maiuri Maria Chiara Maiuri Davide Malagoli May Christine V Malicdan Walter Malorni Na Man Eva-Maria Mandelkow Stéphen Manon Irena Manov Kai Mao Xiang Mao Zixu Mao Philippe Marambaud Daniela Marazziti Yves L Marcel Katie Marchbank Piero Marchetti Stefan J Marciniak Mateus Marcondes Mohsen Mardi Gabriella Marfe Guillermo Mariño Maria Markaki Mark R Marten Seamus J Martin Camille Martinand-Mari Wim Martinet Marta Martinez-Vicente Matilde Masini Paola Matarrese Saburo Matsuo Raffaele Matteoni Andreas Mayer Nathalie M Mazure David J McConkey Melanie J McConnell Catherine McDermott Christine McDonald Gerald M McInerney Sharon L McKenna BethAnn McLaughlin Pamela J McLean Christopher R McMaster G Angus McQuibban Alfred J Meijer Miriam H Meisler Alicia Meléndez Thomas J Melia Gerry Melino Maria A Mena Javier A Menendez Rubem F S Menna-Barreto Manoj B Menon Fiona M Menzies Carol A Mercer Adalberto Merighi Diane E Merry Stefania Meschini Christian G Meyer Thomas F Meyer Chao-Yu Miao Jun-Ying Miao Paul A M Michels Carine Michiels Dalibor Mijaljica Ana Milojkovic Saverio Minucci Clelia Miracco Cindy K Miranti Ioannis Mitroulis Keisuke Miyazawa Noboru Mizushima Baharia Mograbi Simin Mohseni Xavier Molero Bertrand Mollereau Faustino Mollinedo Takashi Momoi Iryna Monastyrska Martha M Monick Mervyn J Monteiro Michael N Moore Rodrigo Mora Kevin Moreau Paula I Moreira Yuji Moriyasu Jorge Moscat Serge Mostowy Jeremy C Mottram Tomasz Motyl Charbel E-H Moussa Sylke Müller Sylviane Muller Karl Münger Christian Münz Leon O Murphy Maureen E Murphy Antonio Musarò Indira Mysorekar Eiichiro Nagata Kazuhiro Nagata Aimable Nahimana Usha Nair Toshiyuki Nakagawa Kiichi Nakahira Hiroyasu Nakano Hitoshi Nakatogawa Meera Nanjundan Naweed I Naqvi Derek P Narendra Masashi Narita Miguel Navarro Steffan T Nawrocki Taras Y Nazarko Andriy Nemchenko Mihai G Netea Thomas P Neufeld Paul A Ney Ioannis P Nezis Huu Phuc Nguyen Daotai Nie Ichizo Nishino Corey Nislow Ralph A Nixon Takeshi Noda Angelika A Noegel Anna Nogalska Satoru Noguchi Lucia Notterpek Ivana Novak Tomoyoshi Nozaki Nobuyuki Nukina Thorsten Nürnberger Beat Nyfeler Keisuke Obara Terry D Oberley Salvatore Oddo Michinaga Ogawa Toya Ohashi Koji Okamoto Nancy L Oleinick F Javier Oliver Laura J Olsen Stefan Olsson Onya Opota Timothy F Osborne Gary K Ostrander Kinya Otsu Jing-hsiung James Ou Mireille Ouimet Michael Overholtzer Bulent Ozpolat Paolo Paganetti Ugo Pagnini Nicolas Pallet Glen E Palmer Camilla Palumbo Tianhong Pan Theocharis Panaretakis Udai Bhan Pandey Zuzana Papackova Issidora Papassideri Irmgard Paris Junsoo Park Ohkmae K Park Jan B Parys Katherine R Parzych Susann Patschan Cam Patterson Sophie Pattingre John M Pawelek Jianxin Peng David H Perlmutter Ida Perrotta George Perry Shazib Pervaiz Matthias Peter Godefridus J Peters Morten Petersen Goran Petrovski James M Phang Mauro Piacentini Philippe Pierre Valérie Pierrefite-Carle Gérard Pierron Ronit Pinkas-Kramarski Antonio Piras Natik Piri Leonidas C Platanias Stefanie Pöggeler Marc Poirot Angelo Poletti Christian Poüs Mercedes Pozuelo-Rubio Mette Prætorius-Ibba Anil Prasad Mark Prescott Muriel Priault Nathalie Produit-Zengaffinen Ann Progulske-Fox Tassula Proikas-Cezanne Serge Przedborski Karin Przyklenk Rosa Puertollano Julien Puyal Shu-Bing Qian Liang Qin Zheng-Hong Qin Susan E Quaggin Nina Raben Hannah Rabinowich Simon W Rabkin Irfan Rahman Abdelhaq Rami Georg Ramm Glenn Randall Felix Randow V Ashutosh Rao Jeffrey C Rathmell Brinda Ravikumar Swapan K Ray Bruce H Reed John C Reed Fulvio Reggiori Anne Régnier-Vigouroux Andreas S Reichert John J Reiners Russel J Reiter Jun Ren José L Revuelta Christopher J Rhodes Konstantinos Ritis Elizete Rizzo Jeffrey Robbins Michel Roberge Hernan Roca Maria C Roccheri Stephane Rocchi H Peter Rodemann Santiago Rodríguez de Córdoba Bärbel Rohrer Igor B Roninson Kirill Rosen Magdalena M Rost-Roszkowska Mustapha Rouis Kasper M A Rouschop Francesca Rovetta Brian P Rubin David C Rubinsztein Klaus Ruckdeschel Edmund B Rucker Assaf Rudich Emil Rudolf Nelson Ruiz-Opazo Rossella Russo Tor Erik Rusten Kevin M Ryan Stefan W Ryter David M Sabatini Junichi Sadoshima Tapas Saha Tatsuya Saitoh Hiroshi Sakagami Yasuyoshi Sakai Ghasem Hoseini Salekdeh Paolo Salomoni Paul M Salvaterra Guy Salvesen Rosa Salvioli Anthony M J Sanchez José A Sánchez-Alcázar Ricardo Sánchez-Prieto Marco Sandri Uma Sankar Poonam Sansanwal Laura Santambrogio Shweta Saran Sovan Sarkar Minnie Sarwal Chihiro Sasakawa Ausra Sasnauskiene Miklós Sass Ken Sato Miyuki Sato Anthony H V Schapira Michael Scharl Hermann M Schätzl Wiep Scheper Stefano Schiaffino Claudio Schneider Marion E Schneider Regine Schneider-Stock Patricia V Schoenlein Daniel F Schorderet Christoph Schüller Gary K Schwartz Luca Scorrano Linda Sealy Per O Seglen Juan Segura-Aguilar Iban Seiliez Oleksandr Seleverstov Christian Sell Jong Bok Seo Duska Separovic Vijayasaradhi Setaluri Takao Setoguchi Carmine Settembre John J Shacka Mala Shanmugam Irving M Shapiro Eitan Shaulian Reuben J Shaw James H Shelhamer Han-Ming Shen Wei-Chiang Shen Zu-Hang Sheng Yang Shi Kenichi Shibuya Yoshihiro Shidoji Jeng-Jer Shieh Chwen-Ming Shih Yohta Shimada Shigeomi Shimizu Takahiro Shintani Orian S Shirihai Gordon C Shore Andriy A Sibirny Stan B Sidhu Beata Sikorska Elaine C M Silva-Zacarin Alison Simmons Anna Katharina Simon Hans-Uwe Simon Cristiano Simone Anne Simonsen David A Sinclair Rajat Singh Debasish Sinha Frank A Sinicrope Agnieszka Sirko Parco M Siu Efthimios Sivridis Vojtech Skop Vladimir P Skulachev Ruth S Slack Soraya S Smaili Duncan R Smith Maria S Soengas Thierry Soldati Xueqin Song Anil K Sood Tuck Wah Soong Federica Sotgia Stephen A Spector Claudia D Spies Wolfdieter Springer Srinivasa M Srinivasula Leonidas Stefanis Joan S Steffan Ruediger Stendel Harald Stenmark Anastasis Stephanou Stephan T Stern Cinthya Sternberg Björn Stork Peter Strålfors Carlos S Subauste Xinbing Sui David Sulzer Jiaren Sun Shi-Yong Sun Zhi-Jun Sun Joseph J Y Sung Kuninori Suzuki Toshihiko Suzuki Michele S Swanson Charles Swanton Sean T Sweeney Lai-King Sy Gyorgy Szabadkai Ira Tabas Heinrich Taegtmeyer Marco Tafani Krisztina Takács-Vellai Yoshitaka Takano Kaoru Takegawa Genzou Takemura Fumihiko Takeshita Nicholas J Talbot Kevin S W Tan Keiji Tanaka Kozo Tanaka Daolin Tang Dingzhong Tang Isei Tanida Bakhos A Tannous Nektarios Tavernarakis Graham S Taylor Gregory A Taylor J Paul Taylor Lance S Terada Alexei Terman Gianluca Tettamanti Karin Thevissen Craig B Thompson Andrew Thorburn Michael Thumm FengFeng Tian Yuan Tian Glauco Tocchini-Valentini Aviva M Tolkovsky Yasuhiko Tomino Lars Tönges Sharon A Tooze Cathy Tournier John Tower Roberto Towns Vladimir Trajkovic Leonardo H Travassos Ting-Fen Tsai Mario P Tschan Takeshi Tsubata Allan Tsung Boris Turk Lorianne S Turner Suresh C Tyagi Yasuo Uchiyama Takashi Ueno Midori Umekawa Rika Umemiya-Shirafuji Vivek K Unni Maria I Vaccaro Enza Maria Valente Greet Van den Berghe Ida J van der Klei Wouter van Doorn Linda F van Dyk Marjolein van Egmond Leo A van Grunsven Peter Vandenabeele Wim P Vandenberghe Ilse Vanhorebeek Eva C Vaquero Guillermo Velasco Tibor Vellai Jose Miguel Vicencio Richard D Vierstra Miquel Vila Cécile Vindis Giampietro Viola Maria Teresa Viscomi Olga V Voitsekhovskaja Clarissa von Haefen Marcela Votruba Keiji Wada Richard Wade-Martins Cheryl L Walker Craig M Walsh Jochen Walter Xiang-Bo Wan Aimin Wang Chenguang Wang Dawei Wang Fan Wang Fen Wang Guanghui Wang Haichao Wang Hong-Gang Wang Horng-Dar Wang Jin Wang Ke Wang Mei Wang Richard C Wang Xinglong Wang Xuejun Wang Ying-Jan Wang Yipeng Wang Zhen Wang Zhigang Charles Wang Zhinong Wang Derick G Wansink Diane M Ward Hirotaka Watada Sarah L Waters Paul Webster Lixin Wei Conrad C Weihl William A Weiss Scott M Welford Long-Ping Wen Caroline A Whitehouse J Lindsay Whitton Alexander J Whitworth Tom Wileman John W Wiley Simon Wilkinson Dieter Willbold Roger L Williams Peter R Williamson Bradly G Wouters Chenghan Wu Dao-Cheng Wu William K K Wu Andreas Wyttenbach Ramnik J Xavier Zhijun Xi Pu Xia Gengfu Xiao Zhiping Xie Zhonglin Xie Da-zhi Xu Jianzhen Xu Liang Xu Xiaolei Xu Ai Yamamoto Akitsugu Yamamoto Shunhei Yamashina Michiaki Yamashita Xianghua Yan Mitsuhiro Yanagida Dun-Sheng Yang Elizabeth Yang Jin-Ming Yang Shi Yu Yang Wannian Yang Wei Yuan Yang Zhifen Yang Meng-Chao Yao Tso-Pang Yao Behzad Yeganeh Wei-Lien Yen Jia-jing Yin Xiao-Ming Yin Ook-Joon Yoo Gyesoon Yoon Seung-Yong Yoon Tomohiro Yorimitsu Yuko 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Autophagy 2012 Apr;8(4):445-544

Life Sciences Institute, University of Michigan, Ann Arbor, MI, USA.

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http://dx.doi.org/10.4161/auto.19496DOI Listing
April 2012

SNARE proteins: one to fuse and three to keep the nascent fusion pore open.

Authors:
Lei Shi Qing-Tao Shen Alexander Kiel Jing Wang Hong-Wei Wang Thomas J Melia James E Rothman Frédéric Pincet

Science 2012 Mar;335(6074):1355-9

Department of Cell Biology, School of Medicine, Yale University, New Haven, CT 06520, USA.

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March 2012

Using light to see and control membrane traffic.

Authors:
Yingke Xu Thomas J Melia Derek K Toomre

Curr Opin Chem Biol 2011 Dec 10;15(6):822-30. Epub 2011 Nov 10.

Department of Cell Biology, Yale University School of Medicine, New Haven, CT 06520-8002, USA.

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December 2011

Dual roles of Munc18-1 rely on distinct binding modes of the central cavity with Stx1A and SNARE complex.

Authors:
Lei Shi Daniel Kümmel Jeff Coleman Thomas J Melia Claudio G Giraudo

Mol Biol Cell 2011 Nov 7;22(21):4150-60. Epub 2011 Sep 7.

Department of Cell Biology, School of Medicine, Yale University, New Haven, CT 06520, USA.

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November 2011

A comprehensive glossary of autophagy-related molecules and processes (2nd edition).

Authors:
Daniel J Klionsky Eric H Baehrecke John H Brumell Charleen T Chu Patrice Codogno Ana Marie Cuervo Jayanta Debnath Vojo Deretic Zvulun Elazar Eeva-Liisa Eskelinen Steven Finkbeiner Juan Fueyo-Margareto David Gewirtz Marja Jäättelä Guido Kroemer Beth Levine Thomas J Melia Noboru Mizushima David C Rubinsztein Anne Simonsen Andrew Thorburn Michael Thumm Sharon A Tooze

Autophagy 2011 Nov 1;7(11):1273-94. Epub 2011 Nov 1.

Life Sciences Institute, and Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI, USA.

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November 2011

SNARE proteins are required for macroautophagy.

Authors:
Usha Nair Anjali Jotwani Jiefei Geng Noor Gammoh Diana Richerson Wei-Lien Yen Janice Griffith Shanta Nag Ke Wang Tyler Moss Misuzu Baba James A McNew Xuejun Jiang Fulvio Reggiori Thomas J Melia Daniel J Klionsky

Cell 2011 Jul;146(2):290-302

Life Sciences Institute, University of Michigan, Ann Arbor, MI 48109, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3143362PMC
July 2011

Protein determinants of SNARE-mediated lipid mixing.

Authors:
Hong Ji Jeff Coleman Rong Yang Thomas J Melia James E Rothman David Tareste

Biophys J 2010 Jul;99(2):553-60

Department of Cell Biology, School of Medicine, Yale University, New Haven, Connecticut, USA.

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July 2010

The selective macroautophagic degradation of aggregated proteins requires the PI3P-binding protein Alfy.

Authors:
Maria Filimonenko Pauline Isakson Kim D Finley Monique Anderson Hyun Jeong Thomas J Melia Bryan J Bartlett Katherine M Myers Hanne C G Birkeland Trond Lamark Dimitri Krainc Andreas Brech Harald Stenmark Anne Simonsen Ai Yamamoto

Mol Cell 2010 Apr;38(2):265-79

Centre for Cancer Biomedicine, University of Oslo, Department of Biochemistry, The Norwegian Radium Hospital, Oslo, Norway.

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April 2010

Acetylation targets mutant huntingtin to autophagosomes for degradation.

Authors:
Hyunkyung Jeong Florian Then Thomas J Melia Joseph R Mazzulli Libin Cui Jeffrey N Savas Cindy Voisine Paolo Paganetti Naoko Tanese Anne C Hart Ai Yamamoto Dimitri Krainc

Cell 2009 Apr;137(1):60-72

Department of Neurology, Massachusetts General Hospital, Harvard Medical School, MassGeneral Institute for Neurodegeneration, Charlestown, MA 02129, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2940108PMC
April 2009

Alternative zippering as an on-off switch for SNARE-mediated fusion.

Authors:
Claudio G Giraudo Alejandro Garcia-Diaz William S Eng Yuhang Chen Wayne A Hendrickson Thomas J Melia James E Rothman

Science 2009 Jan;323(5913):512-6

Department of Physiology and Cellular Biophysics, Columbia University, College of Physicians and Surgeons, 1150 Saint Nicholas Avenue, Russ Berrie Building, Room 520, New York, NY 10032, USA.

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January 2009

Distinct domains of complexins bind SNARE complexes and clamp fusion in vitro.

Authors:
Claudio G Giraudo Alejandro Garcia-Diaz William S Eng Ai Yamamoto Thomas J Melia James E Rothman

J Biol Chem 2008 Jul 22;283(30):21211-9. Epub 2008 May 22.

Department of Physiology and Cellular Biophysics, Columbia University, College of Physicians and Surgeons, 1150 St. Nicholas Avenue, New York, NY 10032, USA.

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July 2008

SNAREpin/Munc18 promotes adhesion and fusion of large vesicles to giant membranes.

Authors:
David Tareste Jingshi Shen Thomas J Melia James E Rothman

Proc Natl Acad Sci U S A 2008 Feb 11;105(7):2380-5. Epub 2008 Feb 11.

Department of Physiology and Cellular Biophysics, Columbia University, 1150 St. Nicholas Avenue, New York, NY 10032, USA.

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February 2008

Energetics and dynamics of SNAREpin folding across lipid bilayers.

Authors:
Feng Li Frédéric Pincet Eric Perez William S Eng Thomas J Melia James E Rothman David Tareste

Nat Struct Mol Biol 2007 Oct 30;14(10):890-6. Epub 2007 Sep 30.

Laboratoire de Physique Statistique, Unité Mixte de Recherche 8550, Centre National de la Recherche Scientifique associée aux Universités Paris VI et Paris VII, Ecole Normale Supérieure, 24 rue Lhomond, 75005 Paris, France.

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October 2007

Putting the clamps on membrane fusion: how complexin sets the stage for calcium-mediated exocytosis.

Authors:
Thomas J Melia

FEBS Lett 2007 May 5;581(11):2131-9. Epub 2007 Mar 5.

Columbia University, Department of Physiology and Cellular Biophysics, 1150 Saint Nicholas Avenue, New York, NY 10032, USA

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May 2007

Selective activation of cognate SNAREpins by Sec1/Munc18 proteins.

Authors:
Jingshi Shen David C Tareste Fabienne Paumet James E Rothman Thomas J Melia

Cell 2007 Jan;128(1):183-95

Department of Physiology and Cellular Biophysics, Columbia University, New York, NY 10032, USA.

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January 2007

Lipidic antagonists to SNARE-mediated fusion.

Authors:
Thomas J Melia Daoqi You David C Tareste James E Rothman

J Biol Chem 2006 Oct 3;281(40):29597-605. Epub 2006 Aug 3.

Department of Physiology and Cellular Biophysics, Columbia University, College of Physicians and Surgeons, New York, New York 10032, USA.

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October 2006

A clamping mechanism involved in SNARE-dependent exocytosis.

Authors:
Claudio G Giraudo William S Eng Thomas J Melia James E Rothman

Science 2006 Aug 22;313(5787):676-80. Epub 2006 Jun 22.

Department of Physiology and Cellular Biophysics, Columbia University, New York, NY 10032, USA.

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August 2006

SNAREs can promote complete fusion and hemifusion as alternative outcomes.

Authors:
Claudio G Giraudo Chuan Hu Daoqi You Avram M Slovic Eugene V Mosharov David Sulzer Thomas J Melia James E Rothman

J Cell Biol 2005 Jul;170(2):249-60

Department of Physiology and Cellular Biophysics, Columbia University College of Physicians and Surgeons, New York, NY 10032, USA.

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July 2005

How a G protein binds a membrane.

Authors:
Zhixian Zhang Thomas J Melia Feng He Ching Yuan Amy McGough Michael F Schmid Theodore G Wensel

J Biol Chem 2004 Aug 1;279(32):33937-45. Epub 2004 Jun 1.

Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, Texas 77030, USA.

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August 2004

Imaging single membrane fusion events mediated by SNARE proteins.

Authors:
Marina Fix Thomas J Melia Jyoti K Jaiswal Joshua Z Rappoport Daoqi You Thomas H Söllner James E Rothman Sanford M Simon

Proc Natl Acad Sci U S A 2004 May 3;101(19):7311-6. Epub 2004 May 3.

Laboratory of Cellular Biophysics, The Rockefeller University, 1230 York Avenue, Box 304, New York, NY 10021, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC409915PMC
May 2004

Liposome fusion assay to monitor intracellular membrane fusion machines.

Authors:
Brenton L Scott Jeffrey S Van Komen Song Liu Thomas Weber Thomas J Melia James A McNew

Methods Enzymol 2003 ;372:274-300

Department of Biochemistry and Cell Biology, Rice University, Houston, Texas 77005, USA.

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December 2003

Fusion of cells by flipped SNAREs.

Authors:
Chuan Hu Mahiuddin Ahmed Thomas J Melia Thomas H Söllner Thomas Mayer James E Rothman

Science 2003 Jun;300(5626):1745-9

Cellular Biochemistry and Biophysics Program, Memorial Sloan-Kettering Cancer Center, 1275 York Avenue, Box 251, New York, NY 10021, USA.

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June 2003

Regulation of membrane fusion by the membrane-proximal coil of the t-SNARE during zippering of SNAREpins.

Authors:
Thomas J Melia Thomas Weber James A McNew Lillian E Fisher Robert J Johnston Frank Parlati Lara K Mahal Thomas H Sollner James E Rothman

J Cell Biol 2002 Sep 3;158(5):929-40. Epub 2002 Sep 3.

Department of Cellular Biochemistry and Biophysics, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.

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September 2002