Thomas Bair

Thomas Bair

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Thomas Bair

Thomas Bair

Publications by authors named "Thomas Bair"

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Early Suppression of Macrophage Gene Expression by .

Front Microbiol 2018 15;9:2464. Epub 2018 Oct 15.

Serviço de Imunologia, Hospital Universitário Professor Edgard Santos, Universidade Federal da Bahia, Salvador, Brazil.

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https://www.frontiersin.org/article/10.3389/fmicb.2018.02464
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http://dx.doi.org/10.3389/fmicb.2018.02464DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6196312PMC
October 2018

Cutting Edge: β-Catenin-Interacting Tcf1 Isoforms Are Essential for Thymocyte Survival but Dispensable for Thymic Maturation Transitions.

J Immunol 2017 05 27;198(9):3404-3409. Epub 2017 Mar 27.

Department of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA 52242;

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http://dx.doi.org/10.4049/jimmunol.1602139DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5423537PMC
May 2017

Histone demethylase PHF8 promotes epithelial to mesenchymal transition and breast tumorigenesis.

Nucleic Acids Res 2017 02;45(4):1687-1702

Department of Anatomy and Cell Biology, Carver College of Medicine, The University of Iowa, IA 52242, USA.

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http://dx.doi.org/10.1093/nar/gkw1093DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389682PMC
February 2017

High throughput genomic sequencing of bioaerosols in broiler chicken production facilities.

Microb Biotechnol 2016 11 28;9(6):782-791. Epub 2016 Jul 28.

Department of Occupational and Environmental Health, University of Iowa, Iowa City, IA, USA.

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http://dx.doi.org/10.1111/1751-7915.12380DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5072194PMC
November 2016

Interferon-γ Inhibits Ebola Virus Infection.

PLoS Pathog 2015 12;11(11):e1005263. Epub 2015 Nov 12.

Department of Microbiology, The University of Iowa, Iowa City, Iowa, United States of America.

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http://dx.doi.org/10.1371/journal.ppat.1005263DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4643030PMC
April 2016

Calcium/calmodulin-dependent kinase II inhibition in smooth muscle reduces angiotensin II-induced hypertension by controlling aortic remodeling and baroreceptor function.

J Am Heart Assoc 2015 Jun 15;4(6):e001949. Epub 2015 Jun 15.

Department of Internal Medicine, Carver College of Medicine, University of Iowa, Iowa City, IA (A.M.P., D.W.N., A.N.V., M.E.D., W.J.K., R.M.W., K.G.L., M.W.C., C.D.S., K.R., I.M.G.) The Iowa City VA Healthcare System, Iowa City, IA (A.N.V., K.G.L., M.W.C., I.M.G.).

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http://dx.doi.org/10.1161/JAHA.115.001949DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4599535PMC
June 2015

Transcriptional changes that characterize the immune reactions of leprosy.

J Infect Dis 2015 May 14;211(10):1658-76. Epub 2014 Nov 14.

Department of Biochemistry Institute of Tropical Medicine of Rio Grande do Norte, Universidade Federal do Rio Grande do Norte National Institute of Science and Technology of Tropical Diseases, Salvador, Bahia, Brazil.

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http://repositorio.ufrn.br/jspui/bitstream/123456789/19273/1
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http://jid.oxfordjournals.org/lookup/doi/10.1093/infdis/jiu6
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http://dx.doi.org/10.1093/infdis/jiu612DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4425823PMC
May 2015

Identification of genomic binding sites for Candida glabrata Pdr1 transcription factor in wild-type and ρ0 cells.

Antimicrob Agents Chemother 2014 Nov 8;58(11):6904-12. Epub 2014 Sep 8.

Department of Molecular Physiology and Biophysics, Carver College of Medicine, University of Iowa, Iowa City, Iowa USA

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http://dx.doi.org/10.1128/AAC.03921-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4249425PMC
November 2014

An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge.

Authors:
Catherine A Brownstein Alan H Beggs Nils Homer Barry Merriman Timothy W Yu Katherine C Flannery Elizabeth T DeChene Meghan C Towne Sarah K Savage Emily N Price Ingrid A Holm Lovelace J Luquette Elaine Lyon Joseph Majzoub Peter Neupert David McCallie Peter Szolovits Huntington F Willard Nancy J Mendelsohn Renee Temme Richard S Finkel Sabrina W Yum Livija Medne Shamil R Sunyaev Ivan Adzhubey Christopher A Cassa Paul I W de Bakker Hatice Duzkale Piotr Dworzyński William Fairbrother Laurent Francioli Birgit H Funke Monica A Giovanni Robert E Handsaker Kasper Lage Matthew S Lebo Monkol Lek Ignaty Leshchiner Daniel G MacArthur Heather M McLaughlin Michael F Murray Tune H Pers Paz P Polak Soumya Raychaudhuri Heidi L Rehm Rachel Soemedi Nathan O Stitziel Sara Vestecka Jochen Supper Claudia Gugenmus Bernward Klocke Alexander Hahn Max Schubach Mortiz Menzel Saskia Biskup Peter Freisinger Mario Deng Martin Braun Sven Perner Richard J H Smith Janeen L Andorf Jian Huang Kelli Ryckman Val C Sheffield Edwin M Stone Thomas Bair E Ann Black-Ziegelbein Terry A Braun Benjamin Darbro Adam P DeLuca Diana L Kolbe Todd E Scheetz Aiden E Shearer Rama Sompallae Kai Wang Alexander G Bassuk Erik Edens Katherine Mathews Steven A Moore Oleg A Shchelochkov Pamela Trapane Aaron Bossler Colleen A Campbell Jonathan W Heusel Anne Kwitek Tara Maga Karin Panzer Thomas Wassink Douglas Van Daele Hela Azaiez Kevin Booth Nic Meyer Michael M Segal Marc S Williams Gerard Tromp Peter White Donald Corsmeier Sara Fitzgerald-Butt Gail Herman Devon Lamb-Thrush Kim L McBride David Newsom Christopher R Pierson Alexander T Rakowsky Aleš Maver Luca Lovrečić Anja Palandačić Borut Peterlin Ali Torkamani Anna Wedell Mikael Huss Andrey Alexeyenko Jessica M Lindvall Måns Magnusson Daniel Nilsson Henrik Stranneheim Fulya Taylan Christian Gilissen Alexander Hoischen Bregje van Bon Helger Yntema Marcel Nelen Weidong Zhang Jason Sager Lu Zhang Kathryn Blair Deniz Kural Michael Cariaso Greg G Lennon Asif Javed Saloni Agrawal Pauline C Ng Komal S Sandhu Shuba Krishna Vamsi Veeramachaneni Ofer Isakov Eran Halperin Eitan Friedman Noam Shomron Gustavo Glusman Jared C Roach Juan Caballero Hannah C Cox Denise Mauldin Seth A Ament Lee Rowen Daniel R Richards F Anthony San Lucas Manuel L Gonzalez-Garay C Thomas Caskey Yu Bai Ying Huang Fang Fang Yan Zhang Zhengyuan Wang Jorge Barrera Juan M Garcia-Lobo Domingo González-Lamuño Javier Llorca Maria C Rodriguez Ignacio Varela Martin G Reese Francisco M De La Vega Edward Kiruluta Michele Cargill Reece K Hart Jon M Sorenson Gholson J Lyon David A Stevenson Bruce E Bray Barry M Moore Karen Eilbeck Mark Yandell Hongyu Zhao Lin Hou Xiaowei Chen Xiting Yan Mengjie Chen Cong Li Can Yang Murat Gunel Peining Li Yong Kong Austin C Alexander Zayed I Albertyn Kym M Boycott Dennis E Bulman Paul M K Gordon A Micheil Innes Bartha M Knoppers Jacek Majewski Christian R Marshall Jillian S Parboosingh Sarah L Sawyer Mark E Samuels Jeremy Schwartzentruber Isaac S Kohane David M Margulies

Genome Biol 2014 Mar 25;15(3):R53. Epub 2014 Mar 25.

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http://dx.doi.org/10.1186/gb-2014-15-3-r53DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4073084PMC
March 2014

Inhibition of p53 expression modifies the specificity of chromatin binding by the androgen receptor.

Oncotarget 2012 Feb;3(2):183-94

Department of Pathology, University of Iowa Hospitals and Clinics, Iowa City, Iowa, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3326648PMC
http://dx.doi.org/10.18632/oncotarget.449DOI Listing
February 2012

Global gene expression profiling in mouse plasma cell tumor precursor and bystander cells reveals potential intervention targets for plasma cell neoplasia.

Blood 2012 Jan 6;119(4):1018-28. Epub 2011 Dec 6.

Molecular Genetics Section, Laboratory of Cancer Biology and Genetics, Center for Cancer Research, National Cancer Institute, National Institutes of Health, 37 Convent Drive, Bethesda, MD 20892, USA.

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http://www.bloodjournal.org/content/119/4/1018.full.pdf
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http://www.bloodjournal.org/cgi/doi/10.1182/blood-2011-06-36
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http://dx.doi.org/10.1182/blood-2011-06-363887DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3271714PMC
January 2012

Identification of primary gene targets of TFAP2C in hormone responsive breast carcinoma cells.

Genes Chromosomes Cancer 2010 Oct;49(10):948-62

Department of Surgery, University of Iowa Carver College of Medicine, Iowa City, IA 52242, USA.

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http://dx.doi.org/10.1002/gcc.20807DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2928401PMC
October 2010

Transcriptional profiling identifies the metabolic phenotype of gonococcal biofilms.

Infect Immun 2009 Sep 15;77(9):3522-32. Epub 2009 Jun 15.

Department of Microbiology, The University of Iowa, Iowa City, Iowa 52242, USA.

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http://dx.doi.org/10.1128/IAI.00036-09DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2737991PMC
September 2009

ZEB1 enhances transendothelial migration and represses the epithelial phenotype of prostate cancer cells.

Mol Biol Cell 2009 Apr 18;20(8):2207-17. Epub 2009 Feb 18.

Department of Molecular Physiology, Roy J. and Lucille A. Carver College of Medicine, The University of Iowa, Iowa City, 52242, USA.

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http://www.molbiolcell.org/content/20/8/2207.full.pdf
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http://www.molbiolcell.org/cgi/doi/10.1091/mbc.E08-10-1076
Publisher Site
http://dx.doi.org/10.1091/mbc.e08-10-1076DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669028PMC
April 2009

Multi-granularity Parallel Computing in a Genome-Scale Molecular Evolution Application.

J Supercomput 2009 Jan;5698:49-59

Coordinated Laboratory for Computational Genomics, University of Iowa, Iowa City, IA 52242 USA.

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http://dx.doi.org/10.1007/978-3-642-03275-2_6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3155254PMC
January 2009

First exons and introns--a survey of GC content and gene structure in the human genome.

In Silico Biol 2006 ;6(3):237-42

Center for Bioinformatics and Computational Biology, The University of Iowa, Iowa City, IA 52242, USA.

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February 2007