Tatiana Giraud

Tatiana Giraud

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Tatiana Giraud

Publications by authors named "Tatiana Giraud"

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Higher Gene Flow in Sex-Related Chromosomes than in Autosomes during Fungal Divergence.

Mol Biol Evol 2020 03;37(3):668-682

Ecologie Systematique Evolution, Batiment 360, Univ. Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.

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http://dx.doi.org/10.1093/molbev/msz252DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7038665PMC
March 2020

Differential gene expression between fungal mating types is associated with sequence degeneration.

Genome Biol Evol 2020 Feb 14. Epub 2020 Feb 14.

Department of Biology, Amherst College, Amherst, 01002 Massachusetts, USA.

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http://dx.doi.org/10.1093/gbe/evaa028DOI Listing
February 2020

Independent domestication events in the blue-cheese fungus Penicillium roqueforti.

Mol Ecol 2020 Jan 20. Epub 2020 Jan 20.

Ecologie Systématique et Evolution, CNRS, AgroParisTech, Ecologie Systématique Evolution, Université Paris-Saclay, Orsay, France.

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http://dx.doi.org/10.1111/mec.15359DOI Listing
January 2020

The complex evolutionary history of apricots: Species divergence, gene flow and multiple domestication events.

Mol Ecol 2019 12 22;28(24):5299-5314. Epub 2019 Nov 22.

UMR BFP, INRA-Université de Bordeaux, Villenave d'Ornon, France.

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http://dx.doi.org/10.1111/mec.15296DOI Listing
December 2019

Population genomics revealed cryptic species within host-specific zombie-ant fungi (Ophiocordyceps unilateralis).

Mol Phylogenet Evol 2019 11 13;140:106580. Epub 2019 Aug 13.

Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91400 Orsay, France.

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http://dx.doi.org/10.1016/j.ympev.2019.106580DOI Listing
November 2019

Understanding Adaptation, Coevolution, Host Specialization, and Mating System in Castrating Anther-Smut Fungi by Combining Population and Comparative Genomics.

Annu Rev Phytopathol 2019 08 23;57:431-457. Epub 2019 Jul 23.

Ecologie Systématique Evolution, Univ. Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, 91400 Orsay, France; email:

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http://dx.doi.org/10.1146/annurev-phyto-082718-095947DOI Listing
August 2019

Little Evidence of Antagonistic Selection in the Evolutionary Strata of Fungal Mating-Type Chromosomes (.

G3 (Bethesda) 2019 06 5;9(6):1987-1998. Epub 2019 Jun 5.

Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91400 Orsay, France

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http://dx.doi.org/10.1534/g3.119.400242DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6553529PMC
June 2019

Convergent recombination cessation between mating-type genes and centromeres in selfing anther-smut fungi.

Genome Res 2019 06 1;29(6):944-953. Epub 2019 May 1.

Ecologie Systématique Evolution, Bâtiment 360, Univ. Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, 91400 Orsay, France.

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http://dx.doi.org/10.1101/gr.242578.118DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6581054PMC
June 2019

Sympatry and interference of divergent pathogen species.

Ecol Evol 2019 May 12;9(9):5457-5467. Epub 2019 Apr 12.

Department of Biology University of Virginia Charlottesville Virginia.

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http://dx.doi.org/10.1002/ece3.5140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509394PMC
May 2019

Multiple infections, relatedness and virulence in the anther-smut fungus castrating Saponaria plants.

Mol Ecol 2018 12 22;27(23):4947-4959. Epub 2018 Nov 22.

Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France.

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http://doi.wiley.com/10.1111/mec.14911
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http://dx.doi.org/10.1111/mec.14911DOI Listing
December 2018

A genome scan of diversifying selection in Ophiocordyceps zombie-ant fungi suggests a role for enterotoxins in co-evolution and host specificity.

Mol Ecol 2018 09 29;27(18):3582-3598. Epub 2018 Aug 29.

Ecologie Systématique Evolution, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France.

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http://dx.doi.org/10.1111/mec.14813DOI Listing
September 2018

Co-occurrence among three divergent plant-castrating fungi in the same Silene host species.

Mol Ecol 2018 Jul 21. Epub 2018 Jul 21.

Laboratoire Ecologie Systématique et Evolution, Univ. Paris Sud, CNRS, AgroParisTech, Université Paris Saclay, Orsay, France.

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http://dx.doi.org/10.1111/mec.14805DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6340787PMC
July 2018

Multiple convergent supergene evolution events in mating-type chromosomes.

Nat Commun 2018 05 21;9(1):2000. Epub 2018 May 21.

Ecologie Systématique Evolution, Bâtiment 360, Univ. Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, 91400, Orsay, France.

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http://dx.doi.org/10.1038/s41467-018-04380-9DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5962589PMC
May 2018

Gene Presence-Absence Polymorphism in Castrating Anther-Smut Fungi: Recent Gene Gains and Phylogeographic Structure.

Genome Biol Evol 2018 04;10(5):1298-1314

Department Génétique et Ecologie Evolutives, Ecologie Systématique Evolution, Bâtiment 360, Univ. Paris-Sud, AgroParisTech, CNRS, Université Paris-Saclay, Orsay, France.

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https://academic.oup.com/gbe/article/10/5/1298/4990910
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http://dx.doi.org/10.1093/gbe/evy089DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5967549PMC
April 2018

Lineage Selection and the Maintenance of Sex.

PLoS One 2013 18;8(6):e66906. Epub 2013 Jun 18.

Bionformatics and Genomics Programme, Center for Genomic Regulation (CRG), Barcelona, Spain ; Bionformatics and Genomics Programme, University Pompeu Fabra (UPF), Barcelona, Spain.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0066906PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3688966PMC
October 2017

Blue cheese-making has shaped the population genetic structure of the mould Penicillium roqueforti.

PLoS One 2017 1;12(3):e0171387. Epub 2017 Mar 1.

Ecologie Systématique Evolution, Université Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0171387PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5331954PMC
August 2017

Evolutionary strata on young mating-type chromosomes despite the lack of sexual antagonism.

Proc Natl Acad Sci U S A 2017 07 19;114(27):7067-7072. Epub 2017 Jun 19.

Ecologie Systématique Evolution, Univ. Paris Sud, AgroParisTech, CNRS, Université Paris-Saclay, 91400 Orsay, France;

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http://dx.doi.org/10.1073/pnas.1701658114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502610PMC
July 2017

Fungi as a Source of Food.

Microbiol Spectr 2017 06;5(3)

Institut de Systématique, Evolution et Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, Muséum National d'Histoire Naturelle, Sorbonne Universités, CP39, 75231 Paris Cedex 5, France.

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http://dx.doi.org/10.1128/microbiolspec.FUNK-0030-2016DOI Listing
June 2017

Fungal Sex: The Basidiomycota.

Microbiol Spectr 2017 06;5(3)

Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.

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http://dx.doi.org/10.1128/microbiolspec.FUNK-0046-2016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5467461PMC
June 2017

Introduction: microbial local adaptation: insights from natural populations, genomics and experimental evolution.

Mol Ecol 2017 04;26(7):1703-1710

Metapopulation Research Centre, Department of Biosciences, University of Helsinki, Viikinkaari 1, 00014, Helsinki, Finland.

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http://doi.wiley.com/10.1111/mec.14091
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http://dx.doi.org/10.1111/mec.14091DOI Listing
April 2017

Crop-to-wild gene flow and its fitness consequences for a wild fruit tree: Towards a comprehensive conservation strategy of the wild apple in Europe.

Evol Appl 2017 02 26;10(2):180-188. Epub 2016 Dec 26.

Ecologie Systématique Evolution Univ. Paris-Sud CNRS AgroParisTech Université Paris-Saclay Orsay France.

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http://dx.doi.org/10.1111/eva.12441DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5253423PMC
February 2017

Strong phylogeographic co-structure between the anther-smut fungus and its white campion host.

New Phytol 2016 Nov 8;212(3):668-679. Epub 2016 Aug 8.

Ecologie Systématique Evolution, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, Orsay, 91400, France.

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http://dx.doi.org/10.1111/nph.14125DOI Listing
November 2016

Intragenome Diversity of Gene Families Encoding Toxin-like Proteins in Venomous Animals.

Integr Comp Biol 2016 11 19;56(5):938-949. Epub 2016 Aug 19.

Ecologie Systematique Evolution, UMR8079, CNRS, Univ. of Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400 Orsay, France.

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http://dx.doi.org/10.1093/icb/icw097DOI Listing
November 2016

Fertility depression among cheese-making Penicillium roqueforti strains suggests degeneration during domestication.

Evolution 2016 09 21;70(9):2099-109. Epub 2016 Aug 21.

Origine, Structure, Evolution de la Biodiversité, UMR 7205 CNRS-MNHN, Muséum National d'Histoire Naturelle, CP39, 57 rue Cuvier, 75231, Paris Cedex 05, France.

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http://dx.doi.org/10.1111/evo.13015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5129480PMC
September 2016

cloncase: Estimation of sex frequency and effective population size by clonemate resampling in partially clonal organisms.

Mol Ecol Resour 2016 Jul 6;16(4):845-61. Epub 2016 Mar 6.

Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.

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http://dx.doi.org/10.1111/1755-0998.12511DOI Listing
July 2016

Lower prevalence but similar fitness in a parasitic fungus at higher radiation levels near Chernobyl.

Mol Ecol 2016 07 6;25(14):3370-83. Epub 2016 Jun 6.

Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.

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http://dx.doi.org/10.1111/mec.13675DOI Listing
July 2016

Insights into Penicillium roqueforti Morphological and Genetic Diversity.

PLoS One 2015 19;10(6):e0129849. Epub 2015 Jun 19.

Université de Brest, EA 3882 Laboratoire Universitaire de Biodiversité et d'Ecologie Microbienne, ESIAB, Technopôle Brest-Iroise, Plouzané, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129849PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4475020PMC
April 2016

Host phenology and geography as drivers of differentiation in generalist fungal mycoparasites.

PLoS One 2015 24;10(3):e0120703. Epub 2015 Mar 24.

Plant Protection Institute, Centre for Agricultural Research, Hungarian Academy of Sciences (MTA), Budapest, Hungary.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0120703PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4372539PMC
February 2016

Distribution and population structure of the anther smut Microbotryum silenes-acaulis parasitizing an arctic-alpine plant.

Mol Ecol 2016 Feb;25(3):811-24

Ecologie Systématique Evolution, CNRS, Univ. Paris-Sud, AgroParisTech, Université Paris-Saclay, 91400, Orsay, France.

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http://dx.doi.org/10.1111/mec.13512DOI Listing
February 2016

Contrasted patterns in mating-type chromosomes in fungi: hotspots versus coldspots of recombination.

Fungal Biol Rev 2015 Dec;29(3-4):220-229

Laboratoire Ecologie, Systématique et Evolution, UMR 8079 CNRS-UPS-AgroParisTech, Bâtiment 360, Université Paris-Sud, 91405 Orsay cedex, France.

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https://linkinghub.elsevier.com/retrieve/pii/S17494613150002
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http://dx.doi.org/10.1016/j.fbr.2015.06.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4680991PMC
December 2015

Adaptive Horizontal Gene Transfers between Multiple Cheese-Associated Fungi.

Curr Biol 2015 Oct 24;25(19):2562-9. Epub 2015 Sep 24.

Ecologie, Systématique et Evolution, UMR8079, Univ. Paris-Sud, 91405 Orsay, France; Ecologie, Systématique et Evolution, UMR8079, CNRS, 91405 Orsay, France. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2015.08.025DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4598740PMC
October 2015

Chaos of Rearrangements in the Mating-Type Chromosomes of the Anther-Smut Fungus Microbotryum lychnidis-dioicae.

Genetics 2015 Aug 3;200(4):1275-84. Epub 2015 Jun 3.

Ecologie, Systématique et Evolution, Univ Paris-Sud, 91405 Orsay, France Centre National de la Recherche Scientifique, F-91405 Orsay, France

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http://dx.doi.org/10.1534/genetics.115.177709DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4574255PMC
August 2015

Genomic basis of the differences between cider and dessert apple varieties.

Evol Appl 2015 Aug 13;8(7):650-61. Epub 2015 Jun 13.

Ecologie, Systématique et Evolution, Université Paris-Sud Orsay, France ; Ecologie, Systématique et Evolution, CNRS Orsay, France.

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http://doi.wiley.com/10.1111/eva.12270
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http://dx.doi.org/10.1111/eva.12270DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4516418PMC
August 2015

Influence of multiple infection and relatedness on virulence: disease dynamics in an experimental plant population and its castrating parasite.

PLoS One 2014 3;9(6):e98526. Epub 2014 Jun 3.

Ecologie, Systématique et Evolution, Université Paris-Sud, Orsay, France; Ecologie, Systématique et Evolution, CNRS, Orsay, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0098526PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4043691PMC
January 2015

Induction of sexual reproduction and genetic diversity in the cheese fungus Penicillium roqueforti.

Evol Appl 2014 Apr 20;7(4):433-41. Epub 2014 Mar 20.

Ecologie, Systématique et Evolution, Université Paris-Sud Orsay Cedex, France ; CNRS Orsay Cedex, France.

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http://dx.doi.org/10.1111/eva.12140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4001442PMC
April 2014

Massive gene swamping among cheese-making fungi.

Microb Cell 2014 Mar 3;1(3):107-109. Epub 2014 Mar 3.

Univ Paris-Sud, Ecologie, Systématique et Evolution, UMR8079, 91405 Orsay, France. ; CNRS, Ecologie, Systématique et Evolution, UMR8079, 91405 Orsay, France.

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http://dx.doi.org/10.15698/mic2014.01.135DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5349230PMC
March 2014

The domestication and evolutionary ecology of apples.

Trends Genet 2014 Feb 27;30(2):57-65. Epub 2013 Nov 27.

Centre National de la Recherche Scientifique (CNRS), Unité Mixte de Recherche (UMR) 8079, Bâtiment 360, 91405 Orsay, France; Université Paris Sud, UMR 8079, Bâtiment 360, 91405 Orsay, France.

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http://max2.ese.u-psud.fr/publications/TIGS_1094.pdf
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http://www.cell.com/trends/genetics/pdf/S0168-9525(13)00190-
Web Search
http://linkinghub.elsevier.com/retrieve/pii/S016895251300190
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http://dx.doi.org/10.1016/j.tig.2013.10.002DOI Listing
February 2014

Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes.

Mol Ecol 2014 Feb 22;23(4):753-73. Epub 2014 Jan 22.

Ecologie, Systématique et Evolution, UMR8079, University of Paris-Sud, Orsay, 91405, France; Ecologie, Systématique et Evolution, CNRS, UMR8079, Orsay, 91405, France; Department of Plant and Microbial Biology, University of California, Berkeley, CA, 94720-3102, USA.

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http://dx.doi.org/10.1111/mec.12631DOI Listing
February 2014

High variability of mitochondrial gene order among fungi.

Genome Biol Evol 2014 Feb;6(2):451-65

Bioinformatics and Genomics Programme, Centre for Genomic Regulation (CRG), Barcelona, Spain.

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http://dx.doi.org/10.1093/gbe/evu028DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3942027PMC
February 2014

Independent domestications of cultivated tree peonies from different wild peony species.

Mol Ecol 2014 Jan 13;23(1):82-95. Epub 2013 Nov 13.

Shanghai Chenshan Plant Science Research Center, Chinese Academy of Sciences, Shanghai Chenshan Botanical Garden, 3888 Chenhua Road, Shanghai, 201602, China; Landscape Architecture College, Beijing Forestry University, No. 35 Tsinghua East Road, Haidian District, Beijing, 100083, China.

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http://dx.doi.org/10.1111/mec.12567DOI Listing
January 2014

Allee effects in ants.

J Anim Ecol 2013 Sep;82(5):956-65

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http://dx.doi.org/10.1111/1365-2656.12091DOI Listing
September 2013

The 'Dr Jekyll and Mr Hyde fungus': noble rot versus gray mold symptoms of Botrytis cinerea on grapes.

Evol Appl 2013 Sep 15;6(6):960-9. Epub 2013 Jul 15.

Biologie et Génétique des Interactions Plante-Parasite, INRA-CIRAD-SupAgro Montpellier Cedex 5, France.

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http://dx.doi.org/10.1111/eva.12079DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3779096PMC
September 2013

Purifying selection after episodes of recurrent adaptive diversification in fungal pathogens.

Infect Genet Evol 2013 Jul 10;17:123-31. Epub 2013 Apr 10.

Laboratoire Ecologie, Systématique et Evolution, Univ Paris-Sud, F-91405 Orsay cedex, France.

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http://dx.doi.org/10.1016/j.meegid.2013.03.012DOI Listing
July 2013

Do black truffles avoid sexual harassment by linking mating type and vegetative incompatibility?

New Phytol 2013 Jul;199(1):10-3

Muséum national d'Histoire naturelle (UMR 7205 OSEB), Paris, France.

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http://doi.wiley.com/10.1111/nph.12329
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http://dx.doi.org/10.1111/nph.12329DOI Listing
July 2013

Crop-to-wild gene flow and spatial genetic structure in the closest wild relatives of the cultivated apple.

Evol Appl 2013 07 28;6(5):737-748. Epub 2013 Jun 28.

CNRS Laboratoire Ecologie Systématique et Evolution - UMR8079 Orsay France.

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http://dx.doi.org/10.1111/eva.12059DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5779123PMC
July 2013

Sex in cheese: evidence for sexuality in the fungus Penicillium roqueforti.

PLoS One 2012 21;7(11):e49665. Epub 2012 Nov 21.

Department Systématique et Evolution, Origine, Structure, Evolution de la Biodiversité, UMR 7205 CNRS-MNHN, Muséum National d'Histoire Naturelle, Paris, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0049665PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3504111PMC
May 2013

History of the invasion of the anther smut pathogen on Silene latifolia in North America.

New Phytol 2013 May 13;198(3):946-56. Epub 2013 Feb 13.

Université Paris-Sud, Laboratoire Ecologie, Systématique et Evolution, UMR8079, Orsay Cedex, F-91405, France.

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http://dx.doi.org/10.1111/nph.12177DOI Listing
May 2013

Genetic signature of a range expansion and leap-frog event after the recent invasion of Europe by the grapevine downy mildew pathogen Plasmopara viticola.

Mol Ecol 2013 May 18;22(10):2771-86. Epub 2013 Mar 18.

Ecologie, Systématique et Evolution, UMR 8079 Université Paris Sud Laboratoire Ecologie, Systematique et Evolution, UMR8079, Orsay Cedex, France.

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http://dx.doi.org/10.1111/mec.12293DOI Listing
May 2013

Extensive divergence between mating-type chromosomes of the anther-smut fungus.

Genetics 2013 Jan 12;193(1):309-15. Epub 2012 Nov 12.

Department of Biology, Amherst College, Amherst, MA 01002, USA.

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http://dx.doi.org/10.1534/genetics.112.146266DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3527253PMC
January 2013

Genes under positive selection in a model plant pathogenic fungus, Botrytis.

Infect Genet Evol 2012 Jul 3;12(5):987-96. Epub 2012 Mar 3.

Ecologie, Systématique et Evolution, Université Paris-Sud UMR8079, F-91405 Orsay Cedex, France.

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http://dx.doi.org/10.1016/j.meegid.2012.02.012DOI Listing
July 2012

Emergence of novel fungal pathogens by ecological speciation: importance of the reduced viability of immigrants.

Mol Ecol 2011 Nov 4;20(21):4521-32. Epub 2011 Oct 4.

INRA, UMR PaVé, B.P. 57, 42 rue Georges Morel, F49071 Beaucouzé, France.

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http://dx.doi.org/10.1111/j.1365-294X.2011.05288.xDOI Listing
November 2011

Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea.

PLoS Genet 2011 Aug 18;7(8):e1002230. Epub 2011 Aug 18.

Unité de Recherche Génomique - Info, UR1164, INRA, Versailles, France.

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http://dx.doi.org/10.1371/journal.pgen.1002230DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3158057PMC
August 2011

Competition, cooperation among kin, and virulence in multiple infections.

Evolution 2011 May 24;65(5):1357-66. Epub 2010 Dec 24.

Origine, Structure, Evolution de la Diversité, UMR 7205 CNRS-MNHN, Muséum national d'histoire naturelle, CP39, 57 rue Cuvier, 75231 Paris Cedex 05, France.

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http://dx.doi.org/10.1111/j.1558-5646.2010.01207.xDOI Listing
May 2011

Having sex, yes, but with whom? Inferences from fungi on the evolution of anisogamy and mating types.

Biol Rev Camb Philos Soc 2011 May 16;86(2):421-42. Epub 2010 Aug 16.

Université Lille Nord de France, USTL, GEPV, CNRS, FRE 3268, Villeneuve d'Ascq, France.

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http://dx.doi.org/10.1111/j.1469-185X.2010.00153.xDOI Listing
May 2011

Nuclear and chloroplast microsatellites show multiple introductions in the worldwide invasion history of common ragweed, Ambrosia artemisiifolia.

PLoS One 2011 Mar 10;6(3):e17658. Epub 2011 Mar 10.

UMR CNRS 7205 Origine, Structure et Evolution de la Biodiversité, Muséum National d'Histoire Naturelle, Paris, France.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0017658PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3053376PMC
March 2011

Maintenance of fungal pathogen species that are specialized to different hosts: allopatric divergence and introgression through secondary contact.

Mol Biol Evol 2011 Jan 13;28(1):459-71. Epub 2010 Sep 13.

Laboratoire Ecologie, Systématique et Evolution, Univ Paris Sud, UMR8079, Orsay, France.

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http://dx.doi.org/10.1093/molbev/msq235DOI Listing
January 2011

Glacial refugia in pathogens: European genetic structure of anther smut pathogens on Silene latifolia and Silene dioica.

PLoS Pathog 2010 Dec 16;6(12):e1001229. Epub 2010 Dec 16.

Université Paris-Sud, Laboratoire Ecologie, Systématique et Evolution, UMR 8079, Orsay, France.

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http://dx.doi.org/10.1371/journal.ppat.1001229DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3002987PMC
December 2010

Linking the emergence of fungal plant diseases with ecological speciation.

Trends Ecol Evol 2010 Jul 29;25(7):387-95. Epub 2010 Apr 29.

Ecologie, Systematique et Evolution, Universite Paris-Sud, 92120 Orsay, France.

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http://dx.doi.org/10.1016/j.tree.2010.03.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2885483PMC
July 2010

Using phylogenies of pheromone receptor genes in the Microbotryum violaceum species complex to investigate possible speciation by hybridization.

Mycologia 2010 May-Jun;102(3):689-96

Ecologie, Systématique et Evolution, Universiti Paris-Sud, F-91405 Orsay cedex, France.

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http://dx.doi.org/10.3852/09-192DOI Listing
July 2010

The impact of genome defense on mobile elements in Microbotryum.

Genetica 2010 Mar 7;138(3):313-9. Epub 2009 Nov 7.

School of Biological Sciences, University of Reading, Reading, UK.

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http://dx.doi.org/10.1007/s10709-009-9419-2DOI Listing
March 2010

Microsatellite loci to recognize species for the cheese starter and contaminating strains associated with cheese manufacturing.

Int J Food Microbiol 2010 Feb 3;137(2-3):204-13. Epub 2009 Dec 3.

Muséum National d'Histoire Naturelle, Département Systématique et Evolution, UMR OSEB 7205, CP 39, 57 rue Cuvier, 75231 Paris Cedex 05, France.

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http://dx.doi.org/10.1016/j.ijfoodmicro.2009.11.014DOI Listing
February 2010

Rapidly evolving genes in pathogens: methods for detecting positive selection and examples among fungi, bacteria, viruses and protists.

Infect Genet Evol 2009 Jul 6;9(4):656-70. Epub 2009 Apr 6.

Ecologie, Systématique et Evolution, Université Paris-Sud, Orsay cedex, France.

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http://dx.doi.org/10.1016/j.meegid.2009.03.010DOI Listing
July 2009

Within-host competitive exclusion among species of the anther smut pathogen.

BMC Ecol 2009 May 7;9:11. Epub 2009 May 7.

Department of Biology, Amherst College, Amherst, MA 01002, USA.

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http://dx.doi.org/10.1186/1472-6785-9-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2688501PMC
May 2009

Ancient trans-specific polymorphism at pheromone receptor genes in basidiomycetes.

Genetics 2009 Jan 10;181(1):209-23. Epub 2008 Nov 10.

Department of Biology, Amherst College, Amherst, Massachusetts 01002-5000, USA.

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http://www.genetics.org/lookup/doi/10.1534/genetics.108.0937
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http://dx.doi.org/10.1534/genetics.108.093708DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2621169PMC
January 2009

Speciation in fungi.

Fungal Genet Biol 2008 Jun 14;45(6):791-802. Epub 2008 Feb 14.

Ecologie, Systématique et Evolution, UMR 8079 CNRS, ESE, Bâtiment 360; Université Paris-Sud, 91405 Orsay cedex, France.

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http://dx.doi.org/10.1016/j.fgb.2008.02.001DOI Listing
June 2008

Mating system of the anther smut fungus Microbotryum violaceum: selfing under heterothallism.

Eukaryot Cell 2008 May 15;7(5):765-75. Epub 2008 Feb 15.

Ecologie, Systématique et Evolution, Bâtiment 360, Université Paris-Sud, F-91405 Orsay cedex, France.

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http://dx.doi.org/10.1128/EC.00440-07DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2394975PMC
May 2008

Genetic diversity in natural populations: a fundamental component of plant-microbe interactions.

Curr Opin Plant Biol 2008 Apr 7;11(2):135-43. Epub 2008 Mar 7.

Univ Paris-Sud, Laboratoire Ecologie Systématique et Evolution, UMR 8079, Orsay Cedex F-91405, France.

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http://dx.doi.org/10.1016/j.pbi.2008.02.002DOI Listing
April 2008

A congruence index for testing topological similarity between trees.

Bioinformatics 2007 Dec 12;23(23):3119-24. Epub 2007 Oct 12.

University Paris-Sud, Laboratoire Ecologie Systématique et Evolution, UMR8079, Orsay, F-91405, Paris, France.

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http://dx.doi.org/10.1093/bioinformatics/btm500DOI Listing
December 2007

Challenges of microsatellite isolation in fungi.

Fungal Genet Biol 2007 Oct 2;44(10):933-49. Epub 2007 Jun 2.

INRA, Biodiversité, Gènes et Communautés, 33612, Cestas, France.

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http://dx.doi.org/10.1016/j.fgb.2007.05.003DOI Listing
October 2007

Expressed sequences tags of the anther smut fungus, Microbotryum violaceum, identify mating and pathogenicity genes.

BMC Genomics 2007 Aug 10;8:272. Epub 2007 Aug 10.

UMR 8079 CNRS-UPS, Ecologie, Systématique et Evolution, Bâtiment 360, Université Paris-Sud, F-91405 Orsay Cedex, France.

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http://dx.doi.org/10.1186/1471-2164-8-272DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2020487PMC
August 2007

Evolution of reproductive isolation within a parasitic fungal species complex.

Evolution 2007 Jul;61(7):1781-7

Ecologie, Systématique et Evolution, UMR 8079 CNRS-UPS-ENGREF, Bâtiment 360, Université Paris-Sud, F-91405 Orsay, France.

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http://dx.doi.org/10.1111/j.1558-5646.2007.00144.xDOI Listing
July 2007

Phylogenetic evidence of host-specific cryptic species in the anther smut fungus.

Evolution 2007 Jan;61(1):15-26

Ecologie, Systématique et Evolution, UMR 8079 CNRS-UPS-ENGREF, Bâtiment 360, Université Paris-Sud, F-91405 Orsay, France.

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http://dx.doi.org/10.1111/j.1558-5646.2007.00002.xDOI Listing
January 2007

Partition of the Botrytis cinerea complex in France using multiple gene genealogies.

Mycologia 2005 Nov-Dec;97(6):1251-67

PMDV, INRA Centre de Versailles, France.

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http://dx.doi.org/10.3852/mycologia.97.6.1251DOI Listing
July 2006

Speciation in parasites: host switching does not automatically lead to allopatry.

Authors:
Tatiana Giraud

Trends Parasitol 2006 Apr 20;22(4):151-2; author reply 152-3. Epub 2006 Feb 20.

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http://dx.doi.org/10.1016/j.pt.2006.02.001DOI Listing
April 2006

Native supercolonies of unrelated individuals in the invasive Argentine ant.

Evolution 2006 Apr;60(4):782-91

Department of Ecology and Evolution, University of Lausanne, Biophore, CH-1015 Lausanne, Switzerland.

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April 2006

Genetic differentiation of neutral markers and quantitative traits in predominantly selfing metapopulations: confronting theory and experiments with Arabidopsis thaliana.

Genet Res 2006 Feb;87(1):1-12

Laboratoire Ecologie, Systématique et Evolution, UMR CNRS 8079, Université Paris-Sud, Orsay, France.

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http://dx.doi.org/10.1017/S0016672306007920DOI Listing
February 2006

Repeat-induced point mutation and the population structure of transposable elements in Microbotryum violaceum.

Genetics 2005 Jul 23;170(3):1081-9. Epub 2005 May 23.

Department of Biology, University of Virginia, Charlottesville, Virginia 22903, USA.

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http://dx.doi.org/10.1534/genetics.105.042564DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1451165PMC
July 2005

Maintenance of sex-linked deleterious alleles by selfing and group selection in metapopulations of the phytopathogenic fungus Microbotryum violaceum.

Am Nat 2005 May 14;165(5):577-89. Epub 2005 Mar 14.

Ecologie, Systématique et Evolution, Unité Mixte de Recherche 8079, Centre National de la Recherche Scientifique-Université Paul Sabatier, Bátiment 360, France.

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http://dx.doi.org/10.1086/428680DOI Listing
May 2005

Sex-specific effect of Microbotryum violaceum (Uredinales) spores on healthy plants of the gynodioecious Gypsophila repens (Caryophyllaceae).

Am J Bot 2005 May;92(5):896-900

Laboratoire d'Ecologie, Systématique et Evolution, UMR 8079 CNRS-UPS, Bâtiment 360, Université Paris-Sud, F-91405 Orsay cedex, France.

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http://dx.doi.org/10.3732/ajb.92.5.896DOI Listing
May 2005