Publications by authors named "Tarmo Puurand"

8Publications

A human-specific VNTR in the TRIB3 promoter causes gene expression variation between individuals.

PLoS Genet 2020 08 3;16(8):e1008981. Epub 2020 Aug 3.

Estonian Biocentre, Institute of Genomics, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1371/journal.pgen.1008981DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7425993PMC
August 2020

AluMine: alignment-free method for the discovery of polymorphic Alu element insertions.

Mob DNA 2019 18;10:31. Epub 2019 Jul 18.

Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1186/s13100-019-0174-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6639938PMC
July 2019

FastGT: an alignment-free method for calling common SNVs directly from raw sequencing reads.

Sci Rep 2017 05 31;7(1):2537. Epub 2017 May 31.

Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1038/s41598-017-02487-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5451431PMC
May 2017

A recent bottleneck of Y chromosome diversity coincides with a global change in culture.

Authors:
Monika Karmin Lauri Saag Mário Vicente Melissa A Wilson Sayres Mari Järve Ulvi Gerst Talas Siiri Rootsi Anne-Mai Ilumäe Reedik Mägi Mario Mitt Luca Pagani Tarmo Puurand Zuzana Faltyskova Florian Clemente Alexia Cardona Ene Metspalu Hovhannes Sahakyan Bayazit Yunusbayev Georgi Hudjashov Michael DeGiorgio Eva-Liis Loogväli Christina Eichstaedt Mikk Eelmets Gyaneshwer Chaubey Kristiina Tambets Sergei Litvinov Maru Mormina Yali Xue Qasim Ayub Grigor Zoraqi Thorfinn Sand Korneliussen Farida Akhatova Joseph Lachance Sarah Tishkoff Kuvat Momynaliev François-Xavier Ricaut Pradiptajati Kusuma Harilanto Razafindrazaka Denis Pierron Murray P Cox Gazi Nurun Nahar Sultana Rane Willerslev Craig Muller Michael Westaway David Lambert Vedrana Skaro Lejla Kovačevic Shahlo Turdikulova Dilbar Dalimova Rita Khusainova Natalya Trofimova Vita Akhmetova Irina Khidiyatova Daria V Lichman Jainagul Isakova Elvira Pocheshkhova Zhaxylyk Sabitov Nikolay A Barashkov Pagbajabyn Nymadawa Evelin Mihailov Joseph Wee Tien Seng Irina Evseeva Andrea Bamberg Migliano Syafiq Abdullah George Andriadze Dragan Primorac Lubov Atramentova Olga Utevska Levon Yepiskoposyan Damir Marjanovic Alena Kushniarevich Doron M Behar Christian Gilissen Lisenka Vissers Joris A Veltman Elena Balanovska Miroslava Derenko Boris Malyarchuk Andres Metspalu Sardana Fedorova Anders Eriksson Andrea Manica Fernando L Mendez Tatiana M Karafet Krishna R Veeramah Neil Bradman Michael F Hammer Ludmila P Osipova Oleg Balanovsky Elza K Khusnutdinova Knut Johnsen Maido Remm Mark G Thomas Chris Tyler-Smith Peter A Underhill Eske Willerslev Rasmus Nielsen Mait Metspalu Richard Villems Toomas Kivisild

Genome Res 2015 Apr 13;25(4):459-66. Epub 2015 Mar 13.

Estonian Biocentre, Tartu, 51010, Estonia; Division of Biological Anthropology, University of Cambridge, Cambridge, CB2 1QH, United Kingdom;

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https://bib.irb.hr/datoteka/715300.2015_Genome_Res._Karmin-A
Web Search
http://genome.cshlp.org/lookup/doi/10.1101/gr.186684.114
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http://dx.doi.org/10.1101/gr.186684.114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4381518PMC
April 2015

SNPmasker: automatic masking of SNPs and repeats across eukaryotic genomes.

Nucleic Acids Res 2006 Jul;34(Web Server issue):W651-5

Department of Bioinformatics, University of Tartu, Estonia.

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http://dx.doi.org/10.1093/nar/gkl125DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1538889PMC
July 2006

MultiPLX: automatic grouping and evaluation of PCR primers.

Bioinformatics 2005 Apr 14;21(8):1701-2. Epub 2004 Dec 14.

Department of Bioinformatics, University of Tartu, Tartu, Estonia.

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http://dx.doi.org/10.1093/bioinformatics/bti219DOI Listing
April 2005