Tamotsu Noguchi

Tamotsu Noguchi

UNVERIFIED PROFILE

Are you Tamotsu Noguchi?   Register this Author

Register author
Tamotsu Noguchi

Tamotsu Noguchi

Publications by authors named "Tamotsu Noguchi"

Are you Tamotsu Noguchi?   Register this Author

19Publications

234Reads

7Profile Views

Both Intrinsically Disordered Regions and Structural Domains Evolve Rapidly in Immune-Related Mammalian Proteins.

Int J Mol Sci 2018 Dec 4;19(12). Epub 2018 Dec 4.

Department of Life Science and Informatics, Maebashi Institute of Technology, 460-1 Kamisadori-machi, Maebashi-shi 371-0816, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/ijms19123860DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321239PMC
December 2018

Codon usage is less optimized in eukaryotic gene segments encoding intrinsically disordered regions than in those encoding structural domains.

Nucleic Acids Res 2016 12 5;44(21):10051-10061. Epub 2016 Oct 5.

Department of Life Science and Informatics, Maebashi Institute of Technology, 460-1 Kamisadori-machi, Maebashi-shi 371-0816, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkw899DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5137448PMC
December 2016

A Method for Systematic Assessment of Intrinsically Disordered Protein Regions by NMR.

Int J Mol Sci 2015 Jul 10;16(7):15743-60. Epub 2015 Jul 10.

Division of Structural Biology, Graduate School of Pharmaceutical Sciences, Nagoya University, Furo-cho, Chikusa-ku, Nagoya, Aichi 464-8601, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.3390/ijms160715743DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4519922PMC
July 2015

Analysis of evolutionary conservation patterns and their influence on identifying protein functional sites.

J Bioinform Comput Biol 2014 Oct;12(5):1440003

Department of Computer Science and Engineering of Shandong, University of Technology, Shandong 255049, P. R. China.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1142/S0219720014400034DOI Listing
October 2014

Simplified sequence-based method for ATP-binding prediction using contextual local evolutionary conservation.

Algorithms Mol Biol 2014 Mar 11;9(1). Epub 2014 Mar 11.

Department of Computer Science, Engineering of Waseda University, Tokyo, Japan.

View Article

Download full-text PDF

Source
http://almob.biomedcentral.com/articles/10.1186/1748-7188-9-
Publisher Site
http://dx.doi.org/10.1186/1748-7188-9-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3995811PMC
March 2014

POODLE-I: disordered region prediction by integrating POODLE series and structural information predictors based on a workflow approach.

In Silico Biol 2010 ;10(3):185-91

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.

View Article

Download full-text PDF

Source
http://www.medra.org/servlet/aliasResolver?alias=iospress&am
Publisher Site
http://dx.doi.org/10.3233/ISB-2010-0426DOI Listing
September 2013

ESPRESSO: a system for estimating protein expression and solubility in protein expression systems.

Proteomics 2013 May;13(9):1444-56

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.

View Article

Download full-text PDF

Source
http://doi.wiley.com/10.1002/pmic.201200175
Publisher Site
http://dx.doi.org/10.1002/pmic.201200175DOI Listing
May 2013

Development and evaluation of data-driven designed tags (DDTs) for controlling protein solubility.

N Biotechnol 2011 Apr 15;28(3):225-31. Epub 2010 Sep 15.

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.nbt.2010.08.012DOI Listing
April 2011

SAHG, a comprehensive database of predicted structures of all human proteins.

Nucleic Acids Res 2011 Jan 3;39(Database issue):D487-93. Epub 2010 Nov 3.

Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, Tokyo 135-0064, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkq1057DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3013665PMC
January 2011

Prediction of protein motions from amino acid sequence and its application to protein-protein interaction.

BMC Struct Biol 2010 Jul 13;10:20. Epub 2010 Jul 13.

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST),2-42, Aomi, Koto-ku, Tokyo, 135-0064, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1472-6807-10-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3245509PMC
July 2010

POODLE-S: web application for predicting protein disorder by using physicochemical features and reduced amino acid set of a position-specific scoring matrix.

Bioinformatics 2007 Sep 28;23(17):2337-8. Epub 2007 Jun 28.

Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology, 2-42 Aomi, Koto-ku, Tokyo 135-0064, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btm330DOI Listing
September 2007

POODLE-L: a two-level SVM prediction system for reliably predicting long disordered regions.

Bioinformatics 2007 Aug 1;23(16):2046-53. Epub 2007 Jun 1.

PharmaDesign, Inc., Tokyo 104-0032, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btm302DOI Listing
August 2007

Predicting mostly disordered proteins by using structure-unknown protein data.

BMC Bioinformatics 2007 Mar 6;8:78. Epub 2007 Mar 6.

Department of Computer Science, Graduate School of Science and Engineering, Waseda University, 3-4-1 Okubo, Shinjuku-ku, Tokyo 169-8555, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2105-8-78DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1838436PMC
March 2007

Systematic comparison of catalytic mechanisms of hydrolysis and transfer reactions classified in the EzCatDB database.

Proteins 2007 Jan;66(1):147-59

Computational Biology Research Center (CBRC), National Institute of Advanced Industrial Science and Technology (AIST), Koto-ku, Tokyo 135-0064, Japan.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/prot.21193DOI Listing
January 2007

PDB-REPRDB: a database of representative protein chains from the Protein Data Bank (PDB) in 2003.

Nucleic Acids Res 2003 Jan;31(1):492-3

Computational Biology Research Center, National Institute of Advanced Industrial Science and Technology (AIST), 2-41-6 Aomi, Koto-ku, Tokyo 135-0064, Japan.

View Article

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC165469PMC
http://dx.doi.org/10.1093/nar/gkg022DOI Listing
January 2003