Publications by authors named "Takashi Itoh"

100Publications

sp. nov., a galactomannan-degrading haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2020 Oct 23. Epub 2020 Oct 23.

Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima-cho, Yokosuka-shi, Kanagawa 237-0061, Japan.

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http://dx.doi.org/10.1099/ijsem.0.004535DOI Listing
October 2020

Reclassification of the genus : proposal of two new genera, gen. nov. to accommodate and gen. nov. to accommodate and .

Int J Syst Evol Microbiol 2020 May;70(5):3399-3405

The Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, 9190401 Jerusalem, Israel.

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http://dx.doi.org/10.1099/ijsem.0.004186DOI Listing
May 2020

Complete Genome Sequence of Athalassotoga saccharophila Strain NAS-01, a Deep-Branching Thermophilic Lineage in the Phylum .

Microbiol Resour Announc 2020 Apr 16;9(16). Epub 2020 Apr 16.

Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1128/MRA.00322-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC7163026PMC
April 2020

Integration of large heterologous DNA fragments into the genome of Thermococcus kodakarensis.

Extremophiles 2020 May 28;24(3):339-353. Epub 2020 Feb 28.

Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto, Japan.

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http://dx.doi.org/10.1007/s00792-020-01159-zDOI Listing
May 2020

gen. nov., sp. nov. and transfer of Huber and Stetter 1992 to the genus as comb. nov.

Int J Syst Evol Microbiol 2020 Mar;70(3):1837-1842

Graduate School of Life Sciences, Toyo University, Oura, Japan, Gunma 374-0193.

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http://dx.doi.org/10.1099/ijsem.0.003981DOI Listing
March 2020

Isolation and characterization of a thermophilic sulfur- and iron-reducing thaumarchaeote from a terrestrial acidic hot spring.

ISME J 2019 10 6;13(10):2465-2474. Epub 2019 Jun 6.

Japan Collection of Microorganisms, RIKEN BioResource Research Center, 3-1-1 Koyadai, Tsukuba, Ibaraki, 305-0074, Japan.

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http://dx.doi.org/10.1038/s41396-019-0447-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6775994PMC
October 2019

Complete Genome Sequence of Ferriphaselus amnicola Strain OYT1, a Neutrophilic, Stalk-Forming, Iron-Oxidizing Bacterium.

Microbiol Resour Announc 2018 Sep 27;7(12). Epub 2018 Sep 27.

Japan Collection of Microorganisms, RIKEN BioResource Research Center, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1128/MRA.00911-18DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6256698PMC
September 2018

Mixed ether-based solvents provide a long cycle life with high rate capability to graphite anodes for Na-ion batteries.

Phys Chem Chem Phys 2018 Jan;20(4):2188-2195

Frontier Research Institute for Interdisciplinary Sciences (FRIS), Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku Sendai 980-8579, Japan.

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http://dx.doi.org/10.1039/c7cp06998gDOI Listing
January 2018

Rheb localized on the Golgi membrane activates lysosome-localized mTORC1 at the Golgi-lysosome contact site.

J Cell Sci 2018 01 29;131(3). Epub 2018 Jan 29.

Center for Frontier Oral Science, Graduate School of Dentistry, Osaka University, Osaka 565-0871, Japan

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http://dx.doi.org/10.1242/jcs.208017DOI Listing
January 2018

Salinarchaeum chitinilyticum sp. nov., a chitin-degrading haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2017 Jul 3;67(7):2274-2278. Epub 2017 Jul 3.

Faculty of Science and Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijsem.0.001941DOI Listing
July 2017

Occurrence of two novel linear penta-amines, pyropentamine and homopyropentamine, in extremely thermophilic Thermus composti.

J Gen Appl Microbiol 2017 Jan 22;62(6):334-339. Epub 2016 Nov 22.

Faculty of Engineering, Maebashi Institute of Technology.

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http://dx.doi.org/10.2323/jgam.2016.05.007DOI Listing
January 2017

Enantioselective α-Benzoyloxylation of Malonic Diesters by Phase-Transfer Catalysis.

Org Lett 2016 11 18;18(21):5484-5487. Epub 2016 Oct 18.

School of Pharmacy, Showa University , 1-5-8 Hatanodai, Shinagawa-ku, Tokyo 142-8555, Japan.

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http://pubs.acs.org/doi/10.1021/acs.orglett.6b02682
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http://dx.doi.org/10.1021/acs.orglett.6b02682DOI Listing
November 2016

Ether-based solvents significantly improved electrochemical performance for Na-ion batteries with amorphous GeO anodes.

Phys Chem Chem Phys 2017 Jan;19(2):1003-1009

Frontier Research Institute for Interdisciplinary Sciences (FRIS), Tohoku University, 6-3 Aoba, Aramaki, Aoba-ku Sendai 980-8579, Japan.

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http://dx.doi.org/10.1039/c6cp06354cDOI Listing
January 2017

Haloparvum alkalitolerans sp. nov., alkali-tolerant haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2016 Dec 23;66(12):5314-5319. Epub 2016 Sep 23.

Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijsem.0.001513DOI Listing
December 2016

Halopiger thermotolerans sp. nov., a thermo-tolerant haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2016 Dec 25;66(12):4975-4980. Epub 2016 Aug 25.

Research Institute of Industrial Technology, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijsem.0.001455DOI Listing
December 2016

The novel bisphosphonate disodium dihydrogen-4-[(methylthio) phenylthio] methanebisphosphonate increases bone mass in post-ovariectomy rats.

J Pharmacol Sci 2016 May 12;131(1):37-50. Epub 2016 Apr 12.

Division of Oral Dysfunction Science, Department of Oral Health and Development Science, Graduate School of Dentistry, Tohoku University, 4-1 Seiryo-machi, Aoba-ku, Sendai 980-8575, Japan.

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http://dx.doi.org/10.1016/j.jphs.2016.04.011DOI Listing
May 2016

Differing susceptibility to autophagic degradation of two LC3-binding proteins: SQSTM1/p62 and TBC1D25/OATL1.

Autophagy 2016 ;12(2):312-26

a Laboratory of Membrane Trafficking Mechanisms , Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University , Aobayama, Aoba-ku, Sendai , Miyagi , Japan.

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http://dx.doi.org/10.1080/15548627.2015.1124223DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4836008PMC
December 2016

In Situ Visualization of Lithium Ion Intercalation into MoS2 Single Crystals using Differential Optical Microscopy with Atomic Layer Resolution.

J Am Chem Soc 2016 Mar 7;138(10):3355-61. Epub 2016 Mar 7.

Institute of Multidisciplinary Research for Advanced Materials, Tohoku University , 2-1-1 Katahira, Sendai 980-8577, Japan.

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http://dx.doi.org/10.1021/jacs.5b11849DOI Listing
March 2016

Virgibacillus kapii sp. nov., isolated from Thai shrimp paste (Ka-pi).

Int J Syst Evol Microbiol 2016 Apr 10;66(4):1832-1837. Epub 2016 Feb 10.

Japan Collection of Microorganisms, RIKEN BioResource Center, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1099/ijsem.0.000951DOI Listing
April 2016

The PtdIns3-phosphatase MTMR3 interacts with mTORC1 and suppresses its activity.

FEBS Lett 2016 Jan 31;590(1):161-73. Epub 2015 Dec 31.

Center for Frontier Oral Science, Graduate School of Dentistry, Osaka University, Japan.

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http://dx.doi.org/10.1002/1873-3468.12048DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5064752PMC
January 2016

sp. nov., isolated from Thai fish sauce (-).

Int J Syst Evol Microbiol 2016 Mar 16;66(3):1151-1155. Epub 2015 Dec 16.

Department of Biochemistry and Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.

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http://dx.doi.org/10.1099/ijsem.0.000851DOI Listing
March 2016

gen. nov., sp. nov., isolated from an acidic terrestrial hot spring, and proposal of ord. nov. and fam. nov. in the phylum .

Int J Syst Evol Microbiol 2016 Feb 9;66(2):1045-1051. Epub 2015 Dec 9.

Japan Collection of Microorganisms, RIKEN BioResource Center, 3-1-1 Koyadai, Tsukuba, Ibaraki 305-0074, Japan.

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http://dx.doi.org/10.1099/ijsem.0.000833DOI Listing
February 2016

Halarchaeum grantii sp. nov., a moderately acidophilic haloarchaeon isolated from a commercial salt sample.

Int J Syst Evol Microbiol 2015 Nov;65(11):3830-3835

Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan.

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http://dx.doi.org/10.1099/ijsem.0.000501DOI Listing
November 2015

Histological reversibility of diabetic nephropathy after kidney transplantation from diabetic donor to non-diabetic recipient.

Nephrology (Carlton) 2015 Jul;20 Suppl 2:40-4

Department of Organ Transplantation and General Surgery, Kyoto Prefectural University of Medicine, Kajii-cho 465, Kamigyo-ku, Kyoto-prefecture, 602-8566, Japan.

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http://dx.doi.org/10.1111/nep.12451DOI Listing
July 2015

Halorubrum gandharaense sp. nov., an alkaliphilic haloarchaeon from commercial rock salt.

Int J Syst Evol Microbiol 2015 Aug 13;65(8):2345-2350. Epub 2015 Apr 13.

Department of Biological Applied Chemistry, Graduate School of Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.000261DOI Listing
August 2015

Rabin8 suppresses autophagosome formation independently of its guanine nucleotide-exchange activity towards Rab8.

J Biochem 2015 Aug 18;158(2):139-53. Epub 2015 Mar 18.

Laboratory of Molecular Cell Biology, Department of Biomolecular Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi 980-8578, Japan; and

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http://dx.doi.org/10.1093/jb/mvv032DOI Listing
August 2015

Halocalculus aciditolerans gen. nov., sp. nov., an acid-tolerant haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2015 May 26;65(Pt 5):1640-1645. Epub 2015 Feb 26.

Faculty of Science and Engineering, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://ijs.microbiologyresearch.org/content/journal/ijsem/10
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http://dx.doi.org/10.1099/ijs.0.000152DOI Listing
May 2015

Halococcus agarilyticus sp. nov., an agar-degrading haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2015 May 26;65(Pt 5):1634-1639. Epub 2015 Feb 26.

Research Institute of Industrial Technology, Toyo University, 2100 Kujirai, Kawagoe-shi, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.000151DOI Listing
May 2015

Description of Symbiobacterium ostreiconchae sp. nov., Symbiobacterium turbinis sp. nov. and Symbiobacterium terraclitae sp. nov., isolated from shellfish, emended description of the genus Symbiobacterium and proposal of Symbiobacteriaceae fam. nov.

Int J Syst Evol Microbiol 2014 Oct 10;64(Pt 10):3375-3383. Epub 2014 Jul 10.

Life Science Research Center, College of Bioresource Sciences, Nihon University, 1866 Kameino, Fujisawa 252-0880, Japan.

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http://dx.doi.org/10.1099/ijs.0.063750-0DOI Listing
October 2014

Ferriphaselus amnicola gen. nov., sp. nov., a neutrophilic, stalk-forming, iron-oxidizing bacterium isolated from an iron-rich groundwater seep.

Int J Syst Evol Microbiol 2014 Mar 18;64(Pt 3):921-925. Epub 2013 Dec 18.

Japan Collection of Microorganisms, RIKEN BioResource Center, Tsukuba, Ibaraki, Japan.

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http://ijs.microbiologyresearch.org/content/journal/ijsem/10
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http://dx.doi.org/10.1099/ijs.0.058487-0DOI Listing
March 2014

Recruitment of the autophagic machinery to endosomes during infection is mediated by ubiquitin.

J Cell Biol 2013 Oct 7;203(1):115-28. Epub 2013 Oct 7.

Department of Genetics, Graduate School of Medicine, 2 Laboratory of Intracellular Membrane Dynamics, Graduate school of Frontier Biosciences, 3 Department of Molecular Virology, Research Institute for Microbial Diseases, 4 Department of Host Defense, WPI Immunology Frontier Research Center, 5 Department of Host Defense, Research Institute for Microbial Disease, and 6 Core Instrumentation Facility, Research Institute for Microbial Disease, Osaka University, 2-2 Yamadaoka, Suita, Osaka 565-0871, Japan.

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http://dx.doi.org/10.1083/jcb.201304188DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3798248PMC
October 2013

Sporomusa intestinalis sp. nov., a homoacetogenic bacterium isolated from the gut of a higher termite, Termes comis (Termitinae).

J Gen Appl Microbiol 2013 ;59(4):321-4

Department of Food, Life, and Environmental Sciences, Faculty of Agriculture, Yamagata University, Tsuruoka, Yamagata 997-8555, Japan.

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http://dx.doi.org/10.2323/jgam.59.321DOI Listing
February 2014

Natronomonas gomsonensis sp. nov., isolated from a solar saltern.

Antonie Van Leeuwenhoek 2013 Nov 13;104(5):627-35. Epub 2013 Jul 13.

Department of Microbiology, Chungbuk National University, Cheongju, Republic of Korea.

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http://dx.doi.org/10.1007/s10482-013-9970-9DOI Listing
November 2013

Functional gene analysis of freshwater iron-rich flocs at circumneutral pH and isolation of a stalk-forming microaerophilic iron-oxidizing bacterium.

Appl Environ Microbiol 2013 Sep 28;79(17):5283-90. Epub 2013 Jun 28.

Japan Collection of Microorganisms, RIKEN BioResource Center, Tsukuba, Ibaraki, Japan.

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http://dx.doi.org/10.1128/AEM.03840-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3753938PMC
September 2013

Asymmetric synthesis and catalytic activity of 3-methyl-β-proline in enantioselective anti-Mannich-type reactions.

J Org Chem 2013 Jul 10;78(14):7131-6. Epub 2013 Jul 10.

School of Pharmacy, Showa University, 1-5-8 Hatanodai, Shinagawa-ku, Tokyo 142-8555, Japan.

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http://dx.doi.org/10.1021/jo4010316DOI Listing
July 2013

Halarchaeum nitratireducens sp. nov., a moderately acidophilic haloarchaeon isolated from commercial sea salt.

Int J Syst Evol Microbiol 2013 Nov 14;63(Pt 11):4202-4206. Epub 2013 Jun 14.

Graduate School of Interdisciplinary New Science, Toyo University, 2100 Kujirai, Kawagoe, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.054668-0DOI Listing
November 2013

Halomicroarcula pellucida gen. nov., sp. nov., a non-pigmented, transparent-colony-forming, halophilic archaeon isolated from solar salt.

Int J Syst Evol Microbiol 2013 Oct 5;63(Pt 10):3556-3562. Epub 2013 Apr 5.

Bio-Nano Electronics Research Centre, Toyo University, 2100 Kujirai, Kawagoe, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.049965-0DOI Listing
October 2013

Halarchaeum rubridurum sp. nov., a moderately acidophilic haloarchaeon isolated from commercial sea salt samples.

Int J Syst Evol Microbiol 2013 Sep 22;63(Pt 9):3143-3147. Epub 2013 Feb 22.

Bio-Nano Electronics Research Center, Toyo University, 2100 Kujirai, Kawagoe, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.049262-0DOI Listing
September 2013

[Development of a computer-aided diagnosis system for the distinction between benign and malignant gastric lesions].

Nihon Hoshasen Gijutsu Gakkai Zasshi 2012 ;68(11):1474-85

Department of Architecture and Mechatronics, Oita University.

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http://dx.doi.org/10.6009/jjrt.2012_jsrt_68.11.1474DOI Listing
September 2013

Covalently linked polyamines in the cell wall peptidoglycan of the anaerobes belonging to the order Selenomonadales.

J Gen Appl Microbiol 2012 ;58(4):339-47

Faculty of Engineering, Maebashi Institute of Technology, Maebashi, Gunma 371-0816, Japan.

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http://dx.doi.org/10.2323/jgam.58.339DOI Listing
January 2013

Metallibacterium scheffleri gen. nov., sp. nov., an alkalinizing gammaproteobacterium isolated from an acidic biofilm.

Int J Syst Evol Microbiol 2013 Apr 3;63(Pt 4):1499-1504. Epub 2012 Aug 3.

Department of Applied Biology, KIT Karlsruhe, Germany.

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http://dx.doi.org/10.1099/ijs.0.042986-0DOI Listing
April 2013

Comparative in vitro evaluation of apheresis platelets stored with 100% plasma versus bicarbonated Ringer's solution with less than 5% plasma.

Transfusion 2013 Mar 15;53(3):655-60. Epub 2012 Jul 15.

Japanese Red Cross Miyagi Blood Center, Sendai, Miyagi, Japan.

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http://dx.doi.org/10.1111/j.1537-2995.2012.03773.xDOI Listing
March 2013

Halarchaeum salinum sp. nov., a moderately acidophilic haloarchaeon isolated from commercial sea salt.

Int J Syst Evol Microbiol 2013 Mar 29;63(Pt 3):1138-1142. Epub 2012 Jun 29.

Bio-Nano Electronics Research Center, Toyo University, 2100 Kujirai, Kawagoe, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.044693-0DOI Listing
March 2013

Halobaculum magnesiiphilum sp. nov., a magnesium-dependent haloarchaeon isolated from commercial salt.

Int J Syst Evol Microbiol 2013 Mar 18;63(Pt 3):861-866. Epub 2012 May 18.

Graduate School of Interdisciplinary New Science, Toyo University, 2100 Kujirai, Kawagoe, Saitama 350-8585, Japan.

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http://dx.doi.org/10.1099/ijs.0.037432-0DOI Listing
March 2013

Atg16L2, a novel isoform of mammalian Atg16L that is not essential for canonical autophagy despite forming an Atg12–5-16L2 complex.

Autophagy 2011 Dec;7(12):1500-13

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3288023PMC
http://dx.doi.org/10.4161/auto.7.12.18025DOI Listing
December 2011

Small GTPase Rab12 regulates constitutive degradation of transferrin receptor.

Traffic 2011 Oct 29;12(10):1432-43. Epub 2011 Jul 29.

Laboratory of Membrane Trafficking Mechanisms, Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Aobayama, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

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http://dx.doi.org/10.1111/j.1600-0854.2011.01240.xDOI Listing
October 2011

A possible role of Atg8 homologs as a scaffold for signal transduction.

Autophagy 2011 Sep 1;7(9):1080-1. Epub 2011 Sep 1.

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan.

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http://dx.doi.org/10.4161/auto.7.9.16178DOI Listing
September 2011

Sphingomonas jejuensis sp. nov., isolated from marine sponge Hymeniacidon flavia.

J Microbiol 2011 Apr 3;49(2):238-42. Epub 2011 May 3.

Institute of Molecular and Cellular Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-Ku, Tokyo 113-0032, Japan.

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http://dx.doi.org/10.1007/s12275-011-0500-zDOI Listing
April 2011

Archaeal diversity in a terrestrial acidic spring field revealed by a novel PCR primer targeting archaeal 16S rRNA genes.

FEMS Microbiol Lett 2011 Jun 4;319(1):34-43. Epub 2011 Apr 4.

Department of Molecular Biology, Tokyo University of Pharmacy and Life Science, Hachioji, Tokyo, Japan.

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https://academic.oup.com/femsle/article-lookup/doi/10.1111/j
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http://dx.doi.org/10.1111/j.1574-6968.2011.02267.xDOI Listing
June 2011

OATL1, a novel autophagosome-resident Rab33B-GAP, regulates autophagosomal maturation.

J Cell Biol 2011 Mar;192(5):839-53

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Aobayama, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

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http://dx.doi.org/10.1083/jcb.201008107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3051816PMC
March 2011

Catalytic asymmetric allylation of 3,4-dihydroisoquinolines and its application to the synthesis of isoquinoline alkaloids.

J Org Chem 2011 Jan 28;76(2):534-42. Epub 2010 Dec 28.

School of Pharmacy, Showa University, 1-5-8 Hatanodai, Shinagawa-ku, Tokyo 142-8555, Japan.

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http://dx.doi.org/10.1021/jo101956mDOI Listing
January 2011

Identification of moderately halophilic bacteria from Thai fermented fish ( pla-ra ) and proposal of Virgibacillus siamensis sp. nov.

J Gen Appl Microbiol 2010 Oct;56(5):369-79

Department of Biochemistry and Microbiology, Chulalongkorn University, Bangkok, Thailand.

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http://dx.doi.org/10.2323/jgam.56.369DOI Listing
October 2010

Aciditerrimonas ferrireducens gen. nov., sp. nov., an iron-reducing thermoacidophilic actinobacterium isolated from a solfataric field.

Int J Syst Evol Microbiol 2011 Jun 16;61(Pt 6):1281-1285. Epub 2010 Jul 16.

Faculty of Life Sciences, TOYO University, Oura, Gunma 374-0193, Japan.

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http://dx.doi.org/10.1099/ijs.0.023044-0DOI Listing
June 2011

Halomarina oriensis gen. nov., sp. nov., a halophilic archaeon isolated from a seawater aquarium.

Int J Syst Evol Microbiol 2011 Apr 21;61(Pt 4):942-946. Epub 2010 May 21.

Ocean Research Institute, University of Tokyo, 1-15-1 Minamidai, Nakano-ku, Tokyo 164-8639, Japan.

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http://dx.doi.org/10.1099/ijs.0.020677-0DOI Listing
April 2011

Migration of eosinophils and CCR2-/CD68-double positive cells into the duodenal mucosa of patients with postinfectious functional dyspepsia.

Am J Gastroenterol 2010 Aug 11;105(8):1835-42. Epub 2010 May 11.

Division of Gastroenterology, Department of Internal Medicine, Nippon Medical School, Bunkyo-ku, Tokyo, Japan.

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http://dx.doi.org/10.1038/ajg.2010.151DOI Listing
August 2010

Haloarcula salaria sp. nov. and Haloarcula tradensis sp. nov., isolated from salt in Thai fish sauce.

Int J Syst Evol Microbiol 2011 Feb 5;61(Pt 2):231-236. Epub 2010 Mar 5.

Japan Collection of Microorganisms, RIKEN BioResource Center, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan.

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http://dx.doi.org/10.1099/ijs.0.021790-0DOI Listing
February 2011

Further refinement of the phylogeny of the Halobacteriaceae based on the full-length RNA polymerase subunit B' (rpoB') gene.

Int J Syst Evol Microbiol 2010 Oct 27;60(Pt 10):2398-2408. Epub 2009 Nov 27.

Institute of Biological Sciences, University of Tsukuba, Tsukuba-shi, Ibaraki, Japan.

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http://dx.doi.org/10.1099/ijs.0.017160-0DOI Listing
October 2010

Gain and loss of an intron in a protein-coding gene in Archaea: the case of an archaeal RNA pseudouridine synthase gene.

BMC Evol Biol 2009 Aug 11;9:198. Epub 2009 Aug 11.

Department of Molecular Biology, School of Life Science, Tokyo University of Pharmacy and Life Science, Horinouchi, Hachioji, Tokyo 192-0392, Japan.

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http://dx.doi.org/10.1186/1471-2148-9-198DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2738675PMC
August 2009

Natronomonas moolapensis sp. nov., non-alkaliphilic isolates recovered from a solar saltern crystallizer pond, and emended description of the genus Natronomonas.

Int J Syst Evol Microbiol 2010 May 10;60(Pt 5):1173-1176. Epub 2009 Aug 10.

Max Planck Institute of Biochemistry, Department of Membrane Biochemistry, Am Klopferspitz 18, D-82152 Martinsried, Germany.

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http://dx.doi.org/10.1099/ijs.0.010132-0DOI Listing
May 2010

Halonotius pteroides gen. nov., sp. nov., an extremely halophilic archaeon recovered from a saltern crystallizer.

Int J Syst Evol Microbiol 2010 May 10;60(Pt 5):1196-1199. Epub 2009 Aug 10.

Max Planck Institute of Biochemistry, Department of Membrane Biochemistry, Am Klopferspitz 18, D-82152 Martinsried, Germany.

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http://dx.doi.org/10.1099/ijs.0.010017-0DOI Listing
May 2010

Gracilibacillus thailandensis sp. nov., from fermented fish (pla-ra).

Int J Syst Evol Microbiol 2010 Apr 6;60(Pt 4):944-948. Epub 2009 Aug 6.

Japan Collection of Microorganisms, RIKEN BioResource Center, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan.

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http://ijs.microbiologyresearch.org/content/journal/ijsem/10
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http://dx.doi.org/10.1099/ijs.0.011981-0DOI Listing
April 2010

Deinococcus aetherius sp. nov., isolated from the stratosphere.

Int J Syst Evol Microbiol 2010 Apr 5;60(Pt 4):776-779. Epub 2009 Aug 5.

Department of Molecular Biology, Tokyo University of Pharmacy and Life Science, Hachioji, Tokyo 192-0392, Japan.

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http://dx.doi.org/10.1099/ijs.0.010876-0DOI Listing
April 2010

Deinococcus aerius sp. nov., isolated from the high atmosphere.

Int J Syst Evol Microbiol 2009 Aug 30;59(Pt 8):1862-6. Epub 2009 Jun 30.

Department of Molecular Biology, Tokyo University of Pharmacy and Life Science, Hachioji, Tokyo 192-0392, Japan.

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http://dx.doi.org/10.1099/ijs.0.007963-0DOI Listing
August 2009

Functional importance of crenarchaea-specific extra-loop revealed by an X-ray structure of a heterotetrameric crenarchaeal splicing endonuclease.

Nucleic Acids Res 2009 Aug 10;37(14):4787-98. Epub 2009 Jun 10.

Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033, Japan.

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http://dx.doi.org/10.1093/nar/gkp506DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2724299PMC
August 2009

Varp is a novel Rab32/38-binding protein that regulates Tyrp1 trafficking in melanocytes.

Mol Biol Cell 2009 Jun 29;20(12):2900-8. Epub 2009 Apr 29.

Laboratory of Membrane Trafficking Mechanisms, Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Aobayama, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

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http://dx.doi.org/10.1091/mbc.e08-12-1161DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2695797PMC
June 2009

Molecular dynamics simulation of amphiphilic molecules in solution: micelle formation and dynamic coexistence.

J Chem Phys 2009 Apr;130(14):144901

Department of Macromolecular Science and Engineering, Graduate School of Science and Technology, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan.

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http://dx.doi.org/10.1063/1.3105341DOI Listing
April 2009

Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand.

Int J Syst Evol Microbiol 2009 Apr;59(Pt 4):880-5

Department of Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok 10330, Thailand.

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http://dx.doi.org/10.1099/ijs.0.001768-0DOI Listing
April 2009

The activation of matrix metalloproteinases by a whole-cell extract from Prevotella nigrescens.

J Endod 2009 Jan 4;35(1):55-9. Epub 2008 Nov 4.

Department of Endodontics, School of Dentistry, Aichi-Gakuin University, Suemori-dori, Aichi, Japan.

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http://dx.doi.org/10.1016/j.joen.2008.09.012DOI Listing
January 2009

Identification and characterization of a novel Tre-2/Bub2/Cdc16 (TBC) protein that possesses Rab3A-GAP activity.

Genes Cells 2009 Jan 10;14(1):41-52. Epub 2008 Dec 10.

Laboratory of Membrane Trafficking Mechanisms, Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Aobayama, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

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http://dx.doi.org/10.1111/j.1365-2443.2008.01251.xDOI Listing
January 2009

[Rab small GTPases and their effectors].

Tanpakushitsu Kakusan Koso 2008 Dec;53(16 Suppl):2065-70

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December 2008

Natrinema gari sp. nov., a halophilic archaeon isolated from fish sauce in Thailand.

Int J Syst Evol Microbiol 2008 Oct;58(Pt 10):2378-83

Department of Food Technology, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand.

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http://dx.doi.org/10.1099/ijs.0.65644-0DOI Listing
October 2008

Polyamine distribution profiles of new members of the phylum Bacteroidetes.

J Gen Appl Microbiol 2008 Aug;54(4):229-36

School of Health Sciences, Faculty of Medicine, Gunma University, Gunma, Japan.

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http://dx.doi.org/10.2323/jgam.54.229DOI Listing
August 2008

Halobacterium piscisalsi sp. nov., from fermented fish (pla-ra) in Thailand.

Int J Syst Evol Microbiol 2008 Sep;58(Pt 9):2136-40

Department of Food Technology, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Songkhla 90112, Thailand.

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http://dx.doi.org/10.1099/ijs.0.65592-0DOI Listing
September 2008

Direct link between Atg protein and small GTPase Rab: Atg16L functions as a potential Rab33 effector in mammals.

Autophagy 2008 Aug 6;4(6):824-6. Epub 2008 Jul 6.

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan.

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http://dx.doi.org/10.4161/auto.6542DOI Listing
August 2008

Rab35 and its GAP EPI64C in T cells regulate receptor recycling and immunological synapse formation.

J Biol Chem 2008 Jun 30;283(26):18323-30. Epub 2008 Apr 30.

Experimental Immunology Branch and Laboratory of Cellular and Molecular Biology, NCI, NIH, Bethesda, MD 20892, USA.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M800056200
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http://dx.doi.org/10.1074/jbc.M800056200DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2440627PMC
June 2008

Golgi-resident small GTPase Rab33B interacts with Atg16L and modulates autophagosome formation.

Mol Biol Cell 2008 Jul 30;19(7):2916-25. Epub 2008 Apr 30.

Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi 980-8578, Japan.

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http://dx.doi.org/10.1091/mbc.e07-12-1231DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2441679PMC
July 2008

Catalytic asymmetric hydroxylation of oxindoles by molecular oxygen using a phase-transfer catalyst.

Org Lett 2008 Apr 19;10(8):1593-5. Epub 2008 Mar 19.

School of Pharmaceutical Sciences, Showa University, 1-5-8 Hatanodai, Shinagawa-ku, Tokyo, Japan.

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http://dx.doi.org/10.1021/ol800260rDOI Listing
April 2008

The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy.

Mol Biol Cell 2008 May 5;19(5):2092-100. Epub 2008 Mar 5.

Department of Cellular Regulation, Research Institute for Microbial Diseases, Osaka University, Osaka 565-0871, Japan.

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http://dx.doi.org/10.1091/mbc.e07-12-1257DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2366860PMC
May 2008

Large scale screening for novel rab effectors reveals unexpected broad Rab binding specificity.

Mol Cell Proteomics 2008 Jun 6;7(6):1031-42. Epub 2008 Feb 6.

Laboratory of Membrane Trafficking Mechanisms, Department of Developmental Biology and Neurosciences, Graduate School of Life Sciences, Tohoku University, Aobayama, Aoba-ku, Sendai, Miyagi 980-8578, Japan.

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M700569-MCP2
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http://dx.doi.org/10.1074/mcp.M700569-MCP200DOI Listing
June 2008

Micromonospora narathiwatensis sp. nov., from Thai peat swamp forest soils.

J Gen Appl Microbiol 2007 Oct;53(5):287-93

Department of Microbiology, Faculty of Pharmaceutical Sciences, Chulalongkorn University, Bangkok, Thailand.

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http://dx.doi.org/10.2323/jgam.53.287DOI Listing
October 2007

Thermogymnomonas acidicola gen. nov., sp. nov., a novel thermoacidophilic, cell wall-less archaeon in the order Thermoplasmatales, isolated from a solfataric soil in Hakone, Japan.

Int J Syst Evol Microbiol 2007 Nov;57(Pt 11):2557-2561

Faculty of Life Sciences, Toyo University, 1-1-1 Izumino, Itakura, Oura, Gunma 374-0193, Japan.

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http://dx.doi.org/10.1099/ijs.0.65203-0DOI Listing
November 2007

[Hemopericardium].

Nihon Rinsho 2007 Sep;Suppl 5 Pt 2:422-4

Division of Cardiology, Department of Internal Medicine, The Jikei University School of Medicine, Kashiwa Hospital.

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September 2007

Phylogenetic relationships within the family Halobacteriaceae inferred from rpoB' gene and protein sequences.

Int J Syst Evol Microbiol 2007 Oct;57(Pt 10):2289-2295

Halophiles Research Institute, 677-1 Shimizu, Noda, Chiba 278-0043, Japan.

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http://dx.doi.org/10.1099/ijs.0.65190-0DOI Listing
October 2007

Halococcus thailandensis sp. nov., from fish sauce in Thailand.

Int J Syst Evol Microbiol 2007 Oct;57(Pt 10):2199-2203

Japan Collection of Microorganisms, RIKEN BioResource Center, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan.

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http://dx.doi.org/10.1099/ijs.0.65218-0DOI Listing
October 2007

Salinicoccus siamensis sp. nov., isolated from fermented shrimp paste in Thailand.

Int J Syst Evol Microbiol 2007 Sep;57(Pt 9):2004-2008

Japan Collection of Microorganisms, RIKEN BioResource Center, 2-1 Hirosawa, Wako-shi, Saitama 351-0198, Japan.

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http://dx.doi.org/10.1099/ijs.0.64876-0DOI Listing
September 2007