Taejoon Kwon

Taejoon Kwon

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Taejoon Kwon

Taejoon Kwon

Publications by authors named "Taejoon Kwon"

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35Publications

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Simple Method To Characterize the Ciliary Proteome of Multiciliated Cells.

J Proteome Res 2020 Jan 18;19(1):391-400. Epub 2019 Nov 18.

Center for Genomic Integrity , Institute for Basic Science , Ulsan 44919 , Republic of Korea.

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http://dx.doi.org/10.1021/acs.jproteome.9b00589DOI Listing
January 2020

A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis.

Dev Biol 2019 Aug 10;452(1):8-20. Epub 2019 Apr 10.

University of California, Berkeley, Department of Molecular and Cell Biology, Life Sciences Addition, Berkeley, CA 94720-3200, USA; Joint Genome Institute, 2800 Mitchell Dr # 100, Walnut Creek, CA 94598, USA; Molecular Genetics Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 9040495, Japan. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2019.03.015DOI Listing
August 2019

Visualizing Microglia with a Fluorescence Turn-On Ugt1a7c Substrate.

Angew Chem Int Ed Engl 2019 Jun 30;58(24):7972-7976. Epub 2019 Apr 30.

Department of Chemistry, Pohang University of Science and Technology, Pohang, 37673, Korea.

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http://dx.doi.org/10.1002/anie.201903058DOI Listing
June 2019

Peroxiredoxin5 Controls Vertebrate Ciliogenesis by Modulating Mitochondrial Reactive Oxygen Species.

Antioxid Redox Signal 2019 May 30;30(14):1731-1745. Epub 2018 Oct 30.

1 KNU-Center for Nonlinear Dynamics, CMRI, School of Life Sciences, BK21 Plus KNU Creative BioResearch Group, College of Natural Sciences, Kyungpook National University , Daegu, South Korea .

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http://dx.doi.org/10.1089/ars.2018.7507DOI Listing
May 2019

Prenatal selective serotonin reuptake inhibitor (SSRI) exposure induces working memory and social recognition deficits by disrupting inhibitory synaptic networks in male mice.

Mol Brain 2019 04 1;12(1):29. Epub 2019 Apr 1.

Molecular Neurophysiology Laboratory, Signature Program in Neuroscience and Behavioral Disorders, Duke-National University of Singapore (NUS) Medical School, 8 College Road, Singapore, 169857, Singapore.

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http://dx.doi.org/10.1186/s13041-019-0452-5DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6444596PMC
April 2019

Lysine demethylase 3a in craniofacial and neural development during Xenopus embryogenesis.

Int J Mol Med 2019 Feb 11;43(2):1105-1113. Epub 2018 Dec 11.

Cell and Matrix Research Institute, Kyungpook National University‑Center for Nonlinear Dynamics, School of Life Sciences, Brain Korea 21 Plus Kyungpook National University Creative BioResearch Group, College of Natural Sciences, Kyungpook National University, Daegu 41566, Republic of Korea.

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http://dx.doi.org/10.3892/ijmm.2018.4024DOI Listing
February 2019

Physiological effects of KDM5C on neural crest migration and eye formation during vertebrate development.

Epigenetics Chromatin 2018 12 6;11(1):72. Epub 2018 Dec 6.

KNU-Center for Nonlinear Dynamics, CMRI, School of Life Sciences, BK21 Plus KNU Creative BioResearch Group, College of Natural Sciences, Kyungpook National University, Daegu, 41566, South Korea.

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http://dx.doi.org/10.1186/s13072-018-0241-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6282277PMC
December 2018

Hybrids Provide Insight Into Cell and Organism Size Control.

Front Physiol 2018 4;9:1758. Epub 2018 Dec 4.

Department of Molecular and Cell Biology, University of California, Berkeley, CA, United States.

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https://www.frontiersin.org/article/10.3389/fphys.2018.01758
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http://dx.doi.org/10.3389/fphys.2018.01758DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6288844PMC
December 2018

KDM1A microenvironment, its oncogenic potential, and therapeutic significance.

Epigenetics Chromatin 2018 06 19;11(1):33. Epub 2018 Jun 19.

KNU-Center for Nonlinear Dynamics, CMRI, School of Life Sciences, BK21 Plus KNU Creative BioResearch Group, College of Natural Sciences, Kyungpook National University, Daegu, 41566, South Korea.

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http://dx.doi.org/10.1186/s13072-018-0203-3DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6006565PMC
June 2018

Xenopus: An alternative model system for identifying muco-active agents.

PLoS One 2018 22;13(2):e0193310. Epub 2018 Feb 22.

School of Life Sciences, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0193310PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5823443PMC
May 2018

Peroxiredoxin1, a novel regulator of pronephros development, influences retinoic acid and Wnt signaling by controlling ROS levels.

Sci Rep 2017 08 21;7(1):8874. Epub 2017 Aug 21.

KNU-Center for Nonlinear Dynamics, School of Life Sciences, BK21 Plus KNU Creative BioResearch Group, College of Natural Sciences, Kyungpook National University, Daegu, 41566, South Korea.

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http://dx.doi.org/10.1038/s41598-017-09262-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5567039PMC
August 2017

Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing.

Dev Biol 2017 06 18;426(2):429-441. Epub 2016 May 18.

Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, Birmingham, AL 35294, United States. Electronic address:

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http://dx.doi.org/10.1016/j.ydbio.2016.05.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5116012PMC
June 2017

Architecture Mapping of the Inner Mitochondrial Membrane Proteome by Chemical Tools in Live Cells.

J Am Chem Soc 2017 03 3;139(10):3651-3662. Epub 2017 Mar 3.

Center for RNA Research, Institute of Basic Science (IBS) , Seoul 08826, Korea.

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http://pubs.acs.org/doi/10.1021/jacs.6b10418
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http://dx.doi.org/10.1021/jacs.6b10418DOI Listing
March 2017

AmphiBase: A new genomic resource for non-model amphibian species.

Authors:
Taejoon Kwon

Genesis 2017 01;55(1-2)

Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology, Ulsan, 44919, Republic of Korea.

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http://dx.doi.org/10.1002/dvg.23010DOI Listing
January 2017

Genome evolution in the allotetraploid frog Xenopus laevis.

Nature 2016 10;538(7625):336-343

University of California, Berkeley, Department of Molecular and Cell Biology and Center for Integrative Genomics, Life Sciences Addition #3200, Berkeley, California 94720-3200, USA.

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http://dx.doi.org/10.1038/nature19840DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5313049PMC
October 2016

Sperm is epigenetically programmed to regulate gene transcription in embryos.

Genome Res 2016 08 31;26(8):1034-46. Epub 2016 Mar 31.

Wellcome Trust/Cancer Research UK Gurdon Institute, University of Cambridge, Cambridge, CB2 1QN, United Kingdom; Department of Zoology, University of Cambridge, Cambridge, CB2 3EJ, United Kingdom;

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http://dx.doi.org/10.1101/gr.201541.115DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4971762PMC
August 2016

Proximity-Directed Labeling Reveals a New Rapamycin-Induced Heterodimer of FKBP25 and FRB in Live Cells.

ACS Cent Sci 2016 Aug 12;2(8):506-16. Epub 2016 Aug 12.

Department of Chemistry, Department of Biological Sciences, UNIST Central Research Facilities (UCRF), and Deparment of Biomedical Engineering, Ulsan National Institute of Science and Technology (UNIST) , Ulsan 44919, Korea.

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http://dx.doi.org/10.1021/acscentsci.6b00137DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4999972PMC
August 2016

Molecular Polymorphism and Divergence of Duplicated Genes in Tetraploid African Clawed Frogs (Xenopus).

Cytogenet Genome Res 2015 9;145(3-4):243-52. Epub 2015 Jun 9.

Department of Biology, McMaster University, Hamilton, Ont., Canada.

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http://dx.doi.org/10.1159/000431108DOI Listing
December 2015

Benchmarking Transcriptome Quantification Methods for Duplicated Genes in Xenopus laevis.

Authors:
Taejoon Kwon

Cytogenet Genome Res 2015 19;145(3-4):253-64. Epub 2015 Jun 19.

Department of Molecular Biosciences, Institute for Cellular and Molecular Biology, Center for Systems and Synthetic Biology, University of Texas, Austin, Tex., USA; Department of Biomedical Engineering, School of Life Sciences, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.

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http://dx.doi.org/10.1159/000431386DOI Listing
December 2015

Coordinated genomic control of ciliogenesis and cell movement by RFX2.

Elife 2014 14;3:e01439. Epub 2014 Jan 14.

Department of Molecular Biosciences, University of Texas at Austin, Austin, United States.

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http://dx.doi.org/10.7554/eLife.01439DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3889689PMC
November 2015

Intrinsic Antimicrobial Resistance Determinants in the Superbug Pseudomonas aeruginosa.

mBio 2015 Oct 27;6(6):e01603-15. Epub 2015 Oct 27.

Department of Molecular Biosciences, The University of Texas at Austin, Austin, Texas, USA Institute of Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, USA Center for Infectious Disease, The University of Texas at Austin, Austin, Texas, USA

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http://dx.doi.org/10.1128/mBio.01603-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4626858PMC
October 2015

Zeta-Tubulin Is a Member of a Conserved Tubulin Module and Is a Component of the Centriolar Basal Foot in Multiciliated Cells.

Curr Biol 2015 Aug 30;25(16):2177-83. Epub 2015 Jul 30.

Department of Biology, Stanford University, Stanford, CA 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address:

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http://www.cell.com/current-biology/pdf/S0960-9822(15)00790-
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http://web.stanford.edu/group/stearnslab/papers/Turk_CB_supp
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http://linkinghub.elsevier.com/retrieve/pii/S096098221500790
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http://dx.doi.org/10.1016/j.cub.2015.06.063DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4546511PMC
August 2015

Identifying direct targets of transcription factor Rfx2 that coordinate ciliogenesis and cell movement.

Genom Data 2014 Dec;2:192-194

Department of Molecular Biosciences, University of Texas at Austin ; Center for Systems & Synthetic Biology and Institute for Cellular & Molecular Biology, University of Texas.

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http://dx.doi.org/10.1016/j.gdata.2014.06.015DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4236849PMC
December 2014

Pseudomonas aeruginosa enhances production of a non-alginate exopolysaccharide during long-term colonization of the cystic fibrosis lung.

PLoS One 2013 6;8(12):e82621. Epub 2013 Dec 6.

Section of Molecular Genetics and Microbiology, University of Texas at Austin, Austin, Texas, United States of America ; Institute of Cellular and Molecular Biology and Center for Systems and Synthetic Biology, University of Texas at Austin, Austin, Texas, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0082621PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3855792PMC
July 2014

Protein-to-mRNA ratios are conserved between Pseudomonas aeruginosa strains.

J Proteome Res 2014 May 17;13(5):2370-80. Epub 2014 Apr 17.

Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin , 2500 Speedway, Austin, Texas 78712, United States.

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http://dx.doi.org/10.1021/pr4011684DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4012837PMC
May 2014

Statistical approach to protein quantification.

Mol Cell Proteomics 2014 Feb 19;13(2):666-77. Epub 2013 Nov 19.

Seminar for Statistics, Eidgenössische Technische Hochschule (ETH) Zurich, Rämistrasse 101, 8092 Zurich, Switzerland;

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http://www.mcponline.org/lookup/doi/10.1074/mcp.M112.025445
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http://dx.doi.org/10.1074/mcp.M112.025445DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3916661PMC
February 2014

Role of Pseudomonas aeruginosa peptidoglycan-associated outer membrane proteins in vesicle formation.

J Bacteriol 2013 Jan 2;195(2):213-9. Epub 2012 Nov 2.

Section of Molecular Genetics and Microbiology, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, TX, USA.

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http://www.marcottelab.org/paper-pdfs/JBacteriol_Wessel_2012
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http://jb.asm.org/cgi/doi/10.1128/JB.01253-12
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http://dx.doi.org/10.1128/JB.01253-12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3553829PMC
January 2013

Id2a functions to limit Notch pathway activity and thereby influence the transition from proliferation to differentiation of retinoblasts during zebrafish retinogenesis.

Dev Biol 2012 Nov 8;371(2):280-92. Epub 2012 Sep 8.

Section of Molecular Cell and Developmental Biology, The University of Texas at Austin, Austin, TX 78712, USA.

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http://dx.doi.org/10.1016/j.ydbio.2012.08.032DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3477674PMC
November 2012

MSblender: A probabilistic approach for integrating peptide identifications from multiple database search engines.

J Proteome Res 2011 Jul 29;10(7):2949-58. Epub 2011 Apr 29.

Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, Austin, Texas, USA.

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http://dx.doi.org/10.1021/pr2002116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3128686PMC
July 2011

Protein abundances are more conserved than mRNA abundances across diverse taxa.

Proteomics 2010 Dec;10(23):4209-12

Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, University of Texas at Austin, TX, USA.

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http://dx.doi.org/10.1002/pmic.201000327DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3113407PMC
December 2010

Parallel evolution in Pseudomonas aeruginosa over 39,000 generations in vivo.

mBio 2010 Sep 21;1(4). Epub 2010 Sep 21.

Section of Molecular Genetics and Microbiology, University of Texas at Austin, Austin, Texas, USA.

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http://dx.doi.org/10.1128/mBio.00199-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2939680PMC
September 2010

Mining gene functional networks to improve mass-spectrometry-based protein identification.

Bioinformatics 2009 Nov 24;25(22):2955-61. Epub 2009 Jul 24.

Department of Computer Sciences, 1 University Station C0500, The University of Texas at Austin, Austin, TX 78712, USA.

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http://dx.doi.org/10.1093/bioinformatics/btp461DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2773251PMC
November 2009