Sylvain V Costes

Sylvain V Costes

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Sylvain V Costes

Sylvain V Costes

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FAIRness and Usability for Open-access Omics Data Systems.

Authors:
Daniel C Berrios Afshin Beheshti Sylvain V Costes

AMIA Annu Symp Proc 2018 5;2018:232-241. Epub 2018 Dec 5.

NASA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6371294PMC
September 2019

Dose, LET and Strain Dependence of Radiation-Induced 53BP1 Foci in 15 Mouse Strains Introducing Novel DNA Damage Metrics.

Authors:
Sébastien Penninckx Egle Cekanaviciute Charlotte Degorre Elodie Guiet Louise Viger Stéphane Lucas Sylvain V Costes

Radiat Res 2019 07 13;192(1):1-12. Epub 2019 May 13.

a Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.

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http://dx.doi.org/10.1667/RR15338.1DOI Listing
July 2019

GeneLab: Omics database for spaceflight experiments.

Authors:
Shayoni Ray Samrawit Gebre Homer Fogle Daniel C Berrios Peter B Tran Jonathan M Galazka Sylvain V Costes

Bioinformatics 2019 May;35(10):1753-1759

Space Biosciences Division, NASA Ames Research Center, Moffett Field, CA, USA.

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https://academic.oup.com/bioinformatics/advance-article/doi/
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http://dx.doi.org/10.1093/bioinformatics/bty884DOI Listing
May 2019

GeneLab Database Analyses Suggest Long-Term Impact of Space Radiation on the Cardiovascular System by the Activation of Through Reactive Oxygen Species.

Authors:
Afshin Beheshti J Tyson McDonald Jack Miller Peter Grabham Sylvain V Costes

Int J Mol Sci 2019 Feb 3;20(3). Epub 2019 Feb 3.

NASA Ames Research Center, Space Biosciences Division, Moffett Field, CA 94035, USA.

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http://dx.doi.org/10.3390/ijms20030661DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6387434PMC
February 2019

A microRNA signature and TGF-β1 response were identified as the key master regulators for spaceflight response.

Authors:
Afshin Beheshti Shayoni Ray Homer Fogle Daniel Berrios Sylvain V Costes

PLoS One 2018 25;13(7):e0199621. Epub 2018 Jul 25.

NASA Ames Research Center, Space Biosciences Division, Moffett Field, California, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0199621PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6059388PMC
January 2019

Persistence of Gamma-H2AX Foci in Bronchial Cells Correlates with Susceptibility to Radiation Associated Lung Cancer in Mice.

Authors:
Donasian O Ochola Rabab Sharif Joel S Bedford Thomas J Keefe Takamitsu A Kato Christina M Fallgren Peter Demant Sylvain V Costes Michael M Weil

Radiat Res 2019 01 6;191(1):67-75. Epub 2018 Nov 6.

a   Department of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado.

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http://www.rrjournal.org/doi/10.1667/RR14979.1
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http://dx.doi.org/10.1667/RR14979.1DOI Listing
January 2019

Exploring the Effects of Spaceflight on Mouse Physiology using the Open Access NASA GeneLab Platform.

Authors:
Afshin Beheshti Yasaman Shirazi-Fard Sungshin Choi Daniel Berrios Samrawit G Gebre Jonathan M Galazka Sylvain V Costes

J Vis Exp 2019 01 13(143). Epub 2019 Jan 13.

Space Biosciences Division, NASA Ames Research Center;

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https://www.jove.com/video/58447/exploring-effects-spaceflig
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http://dx.doi.org/10.3791/58447DOI Listing
January 2019

Central Nervous System Responses to Simulated Galactic Cosmic Rays.

Authors:
Egle Cekanaviciute Susanna Rosi Sylvain V Costes

Int J Mol Sci 2018 Nov 20;19(11). Epub 2018 Nov 20.

Space Biosciences Division, NASA Ames Research Center, Moffett Field, CA 94035, USA.

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http://dx.doi.org/10.3390/ijms19113669DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6275046PMC
November 2018

Comparing Photon and Charged Particle Therapy Using DNA Damage Biomarkers.

Authors:
Shayoni Ray Egle Cekanaviciute Ivan Paulino Lima Brita Singers Sørensen Sylvain V Costes

Int J Part Ther 2018 21;5(1):15-24. Epub 2018 Sep 21.

NASA Ames Research Center, Moffett Field, CA, USA.

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http://dx.doi.org/10.14338/IJPT-18-00018.1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6871597PMC
September 2018

NASA GeneLab Project: Bridging Space Radiation Omics with Ground Studies.

Authors:
Afshin Beheshti Jack Miller Yared Kidane Daniel Berrios Samrawit G Gebre Sylvain V Costes

Radiat Res 2018 06 13;189(6):553-559. Epub 2018 Apr 13.

d   NASA Ames Research Center, Space Biosciences Division, Moffett Field, California 94035.

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http://dx.doi.org/10.1667/RR15062.1DOI Listing
June 2018

Global transcriptomic analysis suggests carbon dioxide as an environmental stressor in spaceflight: A systems biology GeneLab case study.

Authors:
Afshin Beheshti Egle Cekanaviciute David J Smith Sylvain V Costes

Sci Rep 2018 03 8;8(1):4191. Epub 2018 Mar 8.

NASA, Space Biosciences Division, NASA Ames Research Center, Mountain View, CA, USA.

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http://dx.doi.org/10.1038/s41598-018-22613-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5843582PMC
March 2018

Vive la radiorésistance!: converging research in radiobiology and biogerontology to enhance human radioresistance for deep space exploration and colonization.

Authors:
Franco Cortese Dmitry Klokov Andreyan Osipov Jakub Stefaniak Alexey Moskalev Jane Schastnaya Charles Cantor Alexander Aliper Polina Mamoshina Igor Ushakov Alex Sapetsky Quentin Vanhaelen Irina Alchinova Mikhail Karganov Olga Kovalchuk Ruth Wilkins Andrey Shtemberg Marjan Moreels Sarah Baatout Evgeny Izumchenko João Pedro de Magalhães Artem V Artemov Sylvain V Costes Afshin Beheshti Xiao Wen Mao Michael J Pecaut Dmitry Kaminskiy Ivan V Ozerov Morten Scheibye-Knudsen Alex Zhavoronkov

Oncotarget 2018 Mar 12;9(18):14692-14722. Epub 2018 Feb 12.

Biogerontology Research Foundation, London, UK.

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http://dx.doi.org/10.18632/oncotarget.24461DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5865701PMC
March 2018

Drosophila Histone Demethylase KDM4A Has Enzymatic and Non-enzymatic Roles in Controlling Heterochromatin Integrity.

Authors:
Serafin U Colmenares Joel M Swenson Sasha A Langley Cameron Kennedy Sylvain V Costes Gary H Karpen

Dev Cell 2017 07;42(2):156-169.e5

Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA; Department of Molecular and Cellular Biology, University of California, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1016/j.devcel.2017.06.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5572651PMC
July 2017

Optimizing radiotherapy protocols using computer automata to model tumour cell death as a function of oxygen diffusion processes.

Authors:
Perrine Paul-Gilloteaux Vincent Potiron Grégory Delpon Stéphane Supiot Sophie Chiavassa François Paris Sylvain V Costes

Sci Rep 2017 05 23;7(1):2280. Epub 2017 May 23.

Biosciences, Lawrence Berkeley National Laboratory, MS:977, Berkeley, 94720, CA, USA.

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http://dx.doi.org/10.1038/s41598-017-01757-6DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5442104PMC
May 2017

The Trp53 delta proline (Trp53ΔP) mouse exhibits increased genome instability and susceptibility to radiation-induced, but not spontaneous, tumor development.

Authors:
Cassandra J Adams Jennifer S Yu Jian-Hua Mao Kuang-Yu Jen Sylvain V Costes Mark Wade Jocelyn Shoemake Olulanu H Aina Reyno Del Rosario Phuong Thuy Menchavez Robert D Cardiff Geoffrey M Wahl Allan Balmain

Mol Carcinog 2016 09 27;55(9):1387-96. Epub 2015 Aug 27.

Helen Diller Family Comprehensive Cancer Center, University of California San Francisco, San Francisco, California.

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http://dx.doi.org/10.1002/mc.22377DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4891300PMC
September 2016

The composition and organization of Drosophila heterochromatin are heterogeneous and dynamic.

Authors:
Joel M Swenson Serafin U Colmenares Amy R Strom Sylvain V Costes Gary H Karpen

Elife 2016 08 11;5. Epub 2016 Aug 11.

Division of Biological Systems and Engineering, Lawrence Berkeley National Laboratory, Berkeley, United States.

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http://dx.doi.org/10.7554/eLife.16096DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981497PMC
August 2016

Evaluating biomarkers to model cancer risk post cosmic ray exposure.

Authors:
Deepa M Sridharan Aroumougame Asaithamby Steve R Blattnig Sylvain V Costes Paul W Doetsch William S Dynan Philip Hahnfeldt Lynn Hlatky Yared Kidane Amy Kronenberg Mamta D Naidu Leif E Peterson Ianik Plante Artem L Ponomarev Janapriya Saha Antoine M Snijders Kalayarasan Srinivasan Jonathan Tang Erica Werner Janice M Pluth

Life Sci Space Res (Amst) 2016 Jun 21;9:19-47. Epub 2016 May 21.

Lawrence Berkeley National Laboratory, Berkeley, CA, United States. Electronic address:

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http://dx.doi.org/10.1016/j.lssr.2016.05.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5613937PMC
June 2016

Characterizing the DNA Damage Response by Cell Tracking Algorithms and Cell Features Classification Using High-Content Time-Lapse Analysis.

Authors:
Walter Georgescu Alma Osseiran Maria Rojec Yueyong Liu Maxime Bombrun Jonathan Tang Sylvain V Costes

PLoS One 2015 24;10(6):e0129438. Epub 2015 Jun 24.

Lawrence Berkeley National Laboratory, Life Sciences Division, Berkeley, CA, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0129438PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479605PMC
April 2016

Genetic Background Modulates lncRNA-Coordinated Tissue Response to Low Dose Ionizing Radiation.

Authors:
Jonathan Tang Yurong Huang David H Nguyen Sylvain V Costes Antoine M Snijders Jian-Hua Mao

Int J Genomics 2015 23;2015:461038. Epub 2015 Feb 23.

Life Sciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road MS977, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1155/2015/461038DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4353441PMC
March 2015

Densely ionizing radiation acts via the microenvironment to promote aggressive Trp53-null mammary carcinomas.

Authors:
Irineu Illa-Bochaca Haoxu Ouyang Jonathan Tang Christopher Sebastiano Jian-Hua Mao Sylvain V Costes Sandra Demaria Mary Helen Barcellos-Hoff

Cancer Res 2014 Dec 10;74(23):7137-48. Epub 2014 Oct 10.

Department of Radiation Oncology, New York University School of Medicine, New York, New York.

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http://dx.doi.org/10.1158/0008-5472.CAN-14-1212DOI Listing
December 2014

Combinatorial DNA damage pairing model based on X-ray-induced foci predicts the dose and LET dependence of cell death in human breast cells.

Authors:
Nikhil Vadhavkar Christopher Pham Walter Georgescu Thomas Deschamps Anne-Catherine Heuskin Jonathan Tang Sylvain V Costes

Radiat Res 2014 Sep 30;182(3):273-81. Epub 2014 Jul 30.

a  Massachusetts Institute of Technology, Cambridge, Massachusetts 02139.

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http://dx.doi.org/10.1667/RR13792.1DOI Listing
September 2014

Irradiation of juvenile, but not adult, mammary gland increases stem cell self-renewal and estrogen receptor negative tumors.

Authors:
Jonathan Tang Ignacio Fernandez-Garcia Sangeetha Vijayakumar Haydeliz Martinez-Ruis Irineu Illa-Bochaca David H Nguyen Jian-Hua Mao Sylvain V Costes Mary Helen Barcellos-Hoff

Stem Cells 2014 Mar;32(3):649-61

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley California, USA.

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https://www.researchgate.net/profile/Jian-Hua_Mao/publicatio
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http://doi.wiley.com/10.1002/stem.1533
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http://dx.doi.org/10.1002/stem.1533DOI Listing
March 2014

Nuclear dynamics of radiation-induced foci in euchromatin and heterochromatin.

Authors:
Irene Chiolo Jonathan Tang Walter Georgescu Sylvain V Costes

Mutat Res 2013 Oct 16;750(1-2):56-66. Epub 2013 Aug 16.

University of Southern California, 1050 Childs Way, Los Angeles, CA, United States. Electronic address:

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http://dx.doi.org/10.1016/j.mrfmmm.2013.08.001DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3838906PMC
October 2013

The cell cycle timing of centromeric chromatin assembly in Drosophila meiosis is distinct from mitosis yet requires CAL1 and CENP-C.

Authors:
Elaine M Dunleavy Nicole L Beier Walter Gorgescu Jonathan Tang Sylvain V Costes Gary H Karpen

PLoS Biol 2012 27;10(12):e1001460. Epub 2012 Dec 27.

Department of Genome Dynamics, Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

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http://dx.doi.org/10.1371/journal.pbio.1001460DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3531500PMC
May 2013

Rapid and automated multidimensional fluorescence microscopy profiling of 3D human breast cultures.

Authors:
Catherine C Park Walter Georgescu Aris Polyzos Christopher Pham Kazi M Ahmed Hui Zhang Sylvain V Costes

Integr Biol (Camb) 2013 Apr 13;5(4):681-91. Epub 2013 Feb 13.

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1039/c3ib20275eDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3641787PMC
April 2013

Evidence for formation of DNA repair centers and dose-response nonlinearity in human cells.

Authors:
Teresa Neumaier Joel Swenson Christopher Pham Aris Polyzos Alvin T Lo PoAn Yang Jane Dyball Aroumougame Asaithamby David J Chen Mina J Bissell Stefan Thalhammer Sylvain V Costes

Proc Natl Acad Sci U S A 2012 Jan 19;109(2):443-8. Epub 2011 Dec 19.

Institute of Radiation Protection, German Research Center for Environmental Health (GmbH), Ingolstädter Landstrasse 1, 85764 Neuherberg, Germany.

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http://dx.doi.org/10.1073/pnas.1117849108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3258602PMC
January 2012

Interplay between BRCA1 and RHAMM regulates epithelial apicobasal polarization and may influence risk of breast cancer.

Authors:
Christopher A Maxwell Javier Benítez Laia Gómez-Baldó Ana Osorio Núria Bonifaci Ricardo Fernández-Ramires Sylvain V Costes Elisabet Guinó Helen Chen Gareth J R Evans Pooja Mohan Isabel Català Anna Petit Helena Aguilar Alberto Villanueva Alvaro Aytes Jordi Serra-Musach Gad Rennert Flavio Lejbkowicz Paolo Peterlongo Siranoush Manoukian Bernard Peissel Carla B Ripamonti Bernardo Bonanni Alessandra Viel Anna Allavena Loris Bernard Paolo Radice Eitan Friedman Bella Kaufman Yael Laitman Maya Dubrovsky Roni Milgrom Anna Jakubowska Cezary Cybulski Bohdan Gorski Katarzyna Jaworska Katarzyna Durda Grzegorz Sukiennicki Jan Lubiński Yin Yao Shugart Susan M Domchek Richard Letrero Barbara L Weber Frans B L Hogervorst Matti A Rookus J Margriet Collee Peter Devilee Marjolijn J Ligtenberg Rob B van der Luijt Cora M Aalfs Quinten Waisfisz Juul Wijnen Cornelis E P van Roozendaal Douglas F Easton Susan Peock Margaret Cook Clare Oliver Debra Frost Patricia Harrington D Gareth Evans Fiona Lalloo Rosalind Eeles Louise Izatt Carol Chu Diana Eccles Fiona Douglas Carole Brewer Heli Nevanlinna Tuomas Heikkinen Fergus J Couch Noralane M Lindor Xianshu Wang Andrew K Godwin Maria A Caligo Grazia Lombardi Niklas Loman Per Karlsson Hans Ehrencrona Anna von Wachenfeldt Rosa Bjork Barkardottir Ute Hamann Muhammad U Rashid Adriana Lasa Trinidad Caldés Raquel Andrés Michael Schmitt Volker Assmann Kristen Stevens Kenneth Offit João Curado Hagen Tilgner Roderic Guigó Gemma Aiza Joan Brunet Joan Castellsagué Griselda Martrat Ander Urruticoechea Ignacio Blanco Laima Tihomirova David E Goldgar Saundra Buys Esther M John Alexander Miron Melissa Southey Mary B Daly Rita K Schmutzler Barbara Wappenschmidt Alfons Meindl Norbert Arnold Helmut Deissler Raymonda Varon-Mateeva Christian Sutter Dieter Niederacher Evgeny Imyamitov Olga M Sinilnikova Dominique Stoppa-Lyonne Sylvie Mazoyer Carole Verny-Pierre Laurent Castera Antoine de Pauw Yves-Jean Bignon Nancy Uhrhammer Jean-Philippe Peyrat Philippe Vennin Sandra Fert Ferrer Marie-Agnès Collonge-Rame Isabelle Mortemousque Amanda B Spurdle Jonathan Beesley Xiaoqing Chen Sue Healey Mary Helen Barcellos-Hoff Marc Vidal Stephen B Gruber Conxi Lázaro Gabriel Capellá Lesley McGuffog Katherine L Nathanson Antonis C Antoniou Georgia Chenevix-Trench Markus C Fleisch Víctor Moreno Miguel Angel Pujana

PLoS Biol 2011 Nov 15;9(11):e1001199. Epub 2011 Nov 15.

Translational Research Laboratory, Catalan Institute of Oncology, Bellvitge Biomedical Research Institute-IDIBELL, L'Hospitalet, Catalonia, Spain.

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http://dx.doi.org/10.1371/journal.pbio.1001199DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3217025PMC
November 2011

Persistence of γ-H2AX and 53BP1 foci in proliferating and non-proliferating human mammary epithelial cells after exposure to γ-rays or iron ions.

Authors:
Torsten Groesser Hang Chang Gerald Fontenay James Chen Sylvain V Costes Mary Helen Barcellos-Hoff Bahram Parvin Bjorn Rydberg

Int J Radiat Biol 2011 Jul 27;87(7):696-710. Epub 2011 Jan 27.

Lawrence Berkeley National Laboratory, Life Sciences Division, Department of Cancer and DNA Damage Responses, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.3109/09553002.2010.549535DOI Listing
July 2011

Lack of radiation dose or quality dependence of epithelial-to-mesenchymal transition (EMT) mediated by transforming growth factor β.

Authors:
Kumari L Andarawewa Sylvain V Costes Ignacio Fernandez-Garcia William S Chou Shraddha A Ravani Howard Park Mary Helen Barcellos-Hoff

Int J Radiat Oncol Biol Phys 2011 Apr;79(5):1523-31

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.

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http://dx.doi.org/10.1016/j.ijrobp.2010.11.058DOI Listing
April 2011

Phenotypic transition maps of 3D breast acini obtained by imaging-guided agent-based modeling.

Authors:
Jonathan Tang Heiko Enderling Sabine Becker-Weimann Christopher Pham Aris Polyzos Chen-Yi Chen Sylvain V Costes

Integr Biol (Camb) 2011 Apr 4;3(4):408-21. Epub 2011 Mar 4.

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1039/c0ib00092bDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4009383PMC
April 2011

Double-strand breaks in heterochromatin move outside of a dynamic HP1a domain to complete recombinational repair.

Authors:
Irene Chiolo Aki Minoda Serafin U Colmenares Aris Polyzos Sylvain V Costes Gary H Karpen

Cell 2011 Mar 25;144(5):732-44. Epub 2011 Feb 25.

Department of Genome Dynamics, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://nar.oxfordjournals.org/content/39/15/6489.full.pdf
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http://linkinghub.elsevier.com/retrieve/pii/S009286741100126
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http://dx.doi.org/10.1016/j.cell.2011.02.012DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3417143PMC
March 2011

Promotion of variant human mammary epithelial cell outgrowth by ionizing radiation: an agent-based model supported by in vitro studies.

Authors:
Rituparna Mukhopadhyay Sylvain V Costes Alexey V Bazarov William C Hines Mary Helen Barcellos-Hoff Paul Yaswen

Breast Cancer Res 2010 10;12(1):R11. Epub 2010 Feb 10.

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1186/bcr2477DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2880432PMC
August 2010

Mesenchymal cells stimulate capillary morphogenesis via distinct proteolytic mechanisms.

Authors:
Cyrus M Ghajar Suraj Kachgal Ekaterina Kniazeva Hidetoshi Mori Sylvain V Costes Steven C George Andrew J Putnam

Exp Cell Res 2010 Mar 11;316(5):813-25. Epub 2010 Jan 11.

Department of Biomedical Engineering, University of California, Irvine, Irvine, CA 92697, USA.

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http://dx.doi.org/10.1016/j.yexcr.2010.01.013DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2845480PMC
March 2010

Stochastic properties of radiation-induced DSB: DSB distributions in large scale chromatin loops, the HPRT gene and within the visible volumes of DNA repair foci.

Authors:
Artem L Ponomarev Sylvain V Costes Francis A Cucinotta

Int J Radiat Biol 2008 Nov;84(11):916-29

The Universities Space Research Association, Division of Space Life Sciences, Houston, Texas, USA.

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http://dx.doi.org/10.1080/09553000802499212DOI Listing
November 2008

Targeted and nontargeted effects of ionizing radiation that impact genomic instability.

Authors:
Christopher A Maxwell Markus C Fleisch Sylvain V Costes Anna C Erickson Arnaud Boissière Rishi Gupta Shraddha A Ravani Bahram Parvin Mary Helen Barcellos-Hoff

Cancer Res 2008 Oct;68(20):8304-11

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://cancerres.aacrjournals.org/content/68/20/8304.full.pd
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http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
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http://dx.doi.org/10.1158/0008-5472.CAN-08-1212DOI Listing
October 2008

Inhibition of metastatic outgrowth from single dormant tumor cells by targeting the cytoskeleton.

Authors:
Dalit Barkan Hynda Kleinman Justin L Simmons Holly Asmussen Anil K Kamaraju Mark J Hoenorhoff Zi-yao Liu Sylvain V Costes Edward H Cho Stephen Lockett Chand Khanna Ann F Chambers Jeffrey E Green

Cancer Res 2008 Aug;68(15):6241-50

Laboratory of Cell Biology and Genetics, National Cancer Institute, NIH, Bethesda, Maryland 20892, USA.

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http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
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http://dx.doi.org/10.1158/0008-5472.CAN-07-6849DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2561279PMC
August 2008

Ionizing radiation predisposes nonmalignant human mammary epithelial cells to undergo transforming growth factor beta induced epithelial to mesenchymal transition.

Authors:
Kumari L Andarawewa Anna C Erickson William S Chou Sylvain V Costes Philippe Gascard Joni D Mott Mina J Bissell Mary Helen Barcellos-Hoff

Cancer Res 2007 Sep;67(18):8662-70

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

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http://cancerres.aacrjournals.org/cgi/doi/10.1158/0008-5472.
Publisher Site
http://dx.doi.org/10.1158/0008-5472.CAN-07-1294DOI Listing
September 2007

Image-based modeling reveals dynamic redistribution of DNA damage into nuclear sub-domains.

Authors:
Sylvain V Costes Artem Ponomarev James L Chen David Nguyen Francis A Cucinotta Mary Helen Barcellos-Hoff

PLoS Comput Biol 2007 Aug;3(8):e155

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.0030155DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1937017PMC
August 2007

Intensity-based signal separation algorithm for accurate quantification of clustered centrosomes in tissue sections.

Authors:
Markus C Fleisch Christopher A Maxwell Claudia K Kuper Erika T Brown Mary Helen Barcellos-Hoff Sylvain V Costes

Microsc Res Tech 2006 Dec;69(12):964-72

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://dx.doi.org/10.1002/jemt.20372DOI Listing
December 2006

A systems biology approach to multicellular and multi-generational radiation responses.

Authors:
Mary Helen Barcellos-Hoff Sylvain V Costes

Mutat Res 2006 May 18;597(1-2):32-8. Epub 2006 Jan 18.

Life Sciences Division, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Building 74-355, Berkeley, CA 94705, USA.

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http://dx.doi.org/10.1016/j.mrfmmm.2005.09.008DOI Listing
May 2006

Imaging features that discriminate between foci induced by high- and low-LET radiation in human fibroblasts.

Authors:
Sylvain V Costes Arnaud Boissière Shraddha Ravani Raquel Romano Bahram Parvin Mary Helen Barcellos-Hoff

Radiat Res 2006 May;165(5):505-15

Life Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720, USA.

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http://dx.doi.org/10.1667/RR3538.1DOI Listing
May 2006

Kinetic and molecular analysis of nuclear export factor CRM1 association with its cargo in vivo.

Authors:
Dirk Daelemans Sylvain V Costes Stephen Lockett George N Pavlakis

Mol Cell Biol 2005 Jan;25(2):728-39

Rega Institute for Medical Research, Katholieke Universiteit Leuven, Minderbroedersstraat 10, 3000 Leuven, Belgium.

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http://dx.doi.org/10.1128/MCB.25.2.728-739.2005DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC543413PMC
January 2005

In vivo HIV-1 Rev multimerization in the nucleolus and cytoplasm identified by fluorescence resonance energy transfer.

Authors:
Dirk Daelemans Sylvain V Costes Edward H Cho Rebecca A Erwin-Cohen Stephen Lockett George N Pavlakis

J Biol Chem 2004 Nov 3;279(48):50167-75. Epub 2004 Aug 3.

Human Retrovirus Section, Basic Research Laboratory and Image Analysis Laboratory, Science Application International Corporation, NCI-Frederick, Frederick, Maryland 21702-1201, USA.

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http://dx.doi.org/10.1074/jbc.M407713200DOI Listing
November 2004

Automatic and quantitative measurement of protein-protein colocalization in live cells.

Authors:
Sylvain V Costes Dirk Daelemans Edward H Cho Zachary Dobbin George Pavlakis Stephen Lockett

Biophys J 2004 Jun;86(6):3993-4003

Image Analysis Laboratory, National Cancer Institute, Frederick, Maryland, USA.

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http://dx.doi.org/10.1529/biophysj.103.038422DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1304300PMC
June 2004

Human CD8+ T cells store RANTES in a unique secretory compartment and release it rapidly after TcR stimulation.

Authors:
Marta Catalfamo Tatiana Karpova James McNally Sylvain V Costes Stephen J Lockett Erik Bos Peter J Peters Pierre A Henkart

Immunity 2004 Feb;20(2):219-30

Experimental Immunology Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.

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http://dx.doi.org/10.1016/s1074-7613(04)00027-5DOI Listing
February 2004