Sylvain Santoni

Sylvain Santoni

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Sylvain Santoni

Sylvain Santoni

Publications by authors named "Sylvain Santoni"

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52Publications

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A novel high-density grapevine (Vitis vinifera L.) integrated linkage map using GBS in a half-diallel population.

Theor Appl Genet 2019 Aug 3;132(8):2237-2252. Epub 2019 May 3.

UMR AGAP, University of Montpellier-CIRAD-INRA-Montpellier SupAgro, Montpellier, France.

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http://dx.doi.org/10.1007/s00122-019-03351-yDOI Listing
August 2019

Allele-specific expression and genetic determinants of transcriptomic variations in response to mild water deficit in tomato.

Plant J 2018 11 19;96(3):635-650. Epub 2018 Sep 19.

INRA, UR1052, Centre de Recherche PACA, Génétique et Amélioration des Fruits et Légumes, 67 Allée des Chênes, Domaine Saint Maurice, CS60094, Montfavet, 84143, France.

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http://dx.doi.org/10.1111/tpj.14057DOI Listing
November 2018

Genotype-Environment Interaction Shapes the Microbial Assemblage in Grapevine's Phyllosphere and Carposphere: An NGS Approach.

Microorganisms 2018 Sep 21;6(4). Epub 2018 Sep 21.

AGAP, Univ Montpellier, CIRAD, INRA, Montpellier SupAgro, 34000 Montpellier, France.

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http://dx.doi.org/10.3390/microorganisms6040096DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6313654PMC
September 2018

How to optimize the precision of allele and haplotype frequency estimates using pooled-sequencing data.

Mol Ecol Resour 2018 Mar 4;18(2):194-203. Epub 2017 Nov 4.

INRA, UMR AGAP, Montpellier, France.

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http://dx.doi.org/10.1111/1755-0998.12723DOI Listing
March 2018

Domestication rewired gene expression and nucleotide diversity patterns in tomato.

Plant J 2017 Aug 12;91(4):631-645. Epub 2017 Jun 12.

Institut des Sciences de l'Evolution de Montpellier (ISEM-UMR 5554 Université de Montpellier - CNRS-IRD-EPHE), F-34095, Montpellier, France.

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http://dx.doi.org/10.1111/tpj.13592DOI Listing
August 2017

The Discovery of Wild Date Palms in Oman Reveals a Complex Domestication History Involving Centers in the Middle East and Africa.

Curr Biol 2017 Jul 14;27(14):2211-2218.e8. Epub 2017 Jul 14.

Department of Biology, University of Fribourg, Chemin du Musée 10, 1700 Fribourg, Switzerland; Swiss Institute of Bioinformatics, 1700 Fribourg, Switzerland. Electronic address:

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http://dx.doi.org/10.1016/j.cub.2017.06.045DOI Listing
July 2017

Endemic insular and coastal Tunisian date palm genetic diversity.

Genetica 2016 Apr 19;144(2):181-90. Epub 2016 Feb 19.

Laboratoire de génétique moléculaire immunologie et biotechnologie, Faculté des Sciences de Tunis, Université Tunis El Manar, Campus Universitaire, 2092, El Manar, Tunis, Tunisia.

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http://dx.doi.org/10.1007/s10709-016-9888-zDOI Listing
April 2016

Genetic structure of the date palm (Phoenix dactylifera) in the Old World reveals a strong differentiation between eastern and western populations.

Ann Bot 2015 Jul;116(1):101-12

Université Tunis El Manar, Faculté des Sciences de Tunis, Laboratoire de Génétique Moléculaire, Immunologie et Biotechnologie, Campus universitaire El Manar, 2092, Tunisia, IRD, UMR DIADE-F2F, DYNADIV, and EVODYN teams, 911 Av. Agropolis, BP 64501, 34394 Montpellier, Cedex 5, France, Université des Sciences et de la Technologie Houari Boumediene (USTHB), Laboratoire de Recherche sur les Zones Arides (LRZA), BP 32 Bab Ezzouar-El Alia, 16111, Alger, Algeria, Institut des Sciences de l'Evolution de Montpellier, UMR 5554, équipe Dynamique de la biodiversité, anthropo-écologie, Place Eugène Bataillon, CC 065, 34095 Montpellier cedex 05, France, Institute of Horticultural Sciences, University of Agriculture, 38040 Faisalabad, Pakistan, School of Biology, Yachay-Tech, Yachay City of Knowledge, 100119 Urcuqui, Ecuador, Université Oran1-Ahmed Ben Bella, Faculté des sciences de la nature et de la vie, Département de Biologie, BP 1524 El Mnaouar, 31000 Oran, Algérie, ISV/CERD, route de l'Aéroport, BP 486, Djibouti, INRA, UMR AGAP, 2 Place Viala, 34060 Montpellier, Cedex 1, France, Consiglio per la Ricerca e la Sperimentazione in Agricoltura-Unità di Ricerca per la Floricoltura e le Specie Ornamentali (CRA-FSO), Corso degli Inglesi 508, I-18038 Sanremo (IM), Italy, Centre Régional de Recherche en Agriculture Oasienne, 2260 Degueche, Tunisia and Centro Studi e Ricerche per le Palme, Corso F. Cavallotti 113, 18038 Sanremo (IM), Italy.

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http://dx.doi.org/10.1093/aob/mcv068DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4479755PMC
July 2015

A small XY chromosomal region explains sex determination in wild dioecious V. vinifera and the reversal to hermaphroditism in domesticated grapevines.

BMC Plant Biol 2014 Sep 3;14:229. Epub 2014 Sep 3.

Centre de Bio-Archéologie et d'Ecologie CBAE (UMR 5059 CNRS/Université Montpellier 2/EPHE/INRAP), Equipe Interactions, Biodiversité, Sociétés, Institut de Botanique, 163 rue Auguste Broussonet, Montpellier, 34090, France.

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http://dx.doi.org/10.1186/s12870-014-0229-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4167142PMC
September 2014

Assessment of DNA encapsulation, a new room-temperature DNA storage method.

Biopreserv Biobank 2014 Jun;12(3):176-83

1 Institut Pasteur, Collection de l'Institut Pasteur , Département de Microbiologie, Paris, France .

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http://dx.doi.org/10.1089/bio.2013.0082DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128249PMC
June 2014

Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice (Oryza glaberrima).

Mol Ecol 2014 May 18;23(9):2210-27. Epub 2014 Apr 18.

Institut des Sciences de l'Evolution-Montpellier, UMR CNRS-UM2 5554, University Montpellier II, Montpellier, France; UMR AGAP 1334, Montpellier SupAgro, Montpellier, France.

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http://dx.doi.org/10.1111/mec.12738DOI Listing
May 2014

Developing nuclear DNA phylogenetic markers in the angiosperm genus Leucadendron (Proteaceae): a next-generation sequencing transcriptomic approach.

Mol Phylogenet Evol 2014 Jan 13;70:37-46. Epub 2013 Aug 13.

Université Montpellier 2, CNRS, Institut des Sciences de l'Évolution (UMR 5554), Place Eugène Bataillon, 34095 Montpellier cedex 05, France. Electronic address:

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http://dx.doi.org/10.1016/j.ympev.2013.07.027DOI Listing
January 2014

Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.).

Theor Appl Genet 2011 Oct 15;123(6):907-26. Epub 2011 Jul 15.

UMR de Génétique Végétale, INRA/CNRS/AgroParisTech/Univ. Paris XI, Ferme du Moulon, 91190 Gif sur Yvette, France.

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http://dx.doi.org/10.1007/s00122-011-1636-2DOI Listing
October 2011

Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae).

BMC Evol Biol 2011 Jun 24;11:181. Epub 2011 Jun 24.

Institut National de la Recherche Agronomique, Centre de Montpellier, UMR Diversité et Adaptation des Plantes Cultivées, Domaine de Melgueil, 34130 Mauguio, France.

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http://dx.doi.org/10.1186/1471-2148-11-181DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3142523PMC
June 2011

Grafting versus seed propagated apricot populations: two main gene pools in Tunisia evidenced by SSR markers and model-based Bayesian clustering.

Genetica 2010 Oct 14;138(9-10):1023-32. Epub 2010 Sep 14.

INRA, UR1052 Génétique et Amélioration des Fruits et Légumes, Domaine Saint-Maurice, 84143 Montfavet, France.

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http://dx.doi.org/10.1007/s10709-010-9488-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2948653PMC
October 2010

Association of a CONSTANS-LIKE gene to flowering and height in autotetraploid alfalfa.

Theor Appl Genet 2010 Sep 16;121(5):865-76. Epub 2010 May 16.

INRA, UR 4, Unité de Recherche Pluridisciplinaire Prairies et Plantes Fourragères, BP 6, 86600, Lusignan, France.

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http://dx.doi.org/10.1007/s00122-010-1356-zDOI Listing
September 2010

Ultramafic soils from New Caledonia structure Pisolithus albus in ecotype.

FEMS Microbiol Ecol 2010 May 27;72(2):238-49. Epub 2010 Jan 27.

Laboratoire des Symbioses Tropicales et Méditerranéennes (LSTM), UMR 113 CIRAD/INRA/IRD/SupAgro/UMII, Centre IRD, Nouméa, Nouvelle-Calédonie.

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http://dx.doi.org/10.1111/j.1574-6941.2010.00843.xDOI Listing
May 2010

Traditional agroecosystems as conservatories and incubators of cultivated plant varietal diversity: the case of fig (Ficus carica L.) in Morocco.

BMC Plant Biol 2010 Feb 18;10:28. Epub 2010 Feb 18.

INRA, UMR 1098, Développement et Amélioration des Plantes (DAP), Bat, 3, Campus CIRAD TA A 96/03, Av, Agropolis, 34398 Montpellier Cedex 5, France.

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http://dx.doi.org/10.1186/1471-2229-10-28DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2844065PMC
February 2010

Cyto-nuclear discordance in the phylogeny of Ficus section Galoglychia and host shifts in plant-pollinator associations.

BMC Evol Biol 2009 Oct 12;9:248. Epub 2009 Oct 12.

CNRS, UMR 5175 Centre d'Ecologie Fonctionnelle et Evolutive (CEFE), Equipe Interactions Biotiques, F-34293 Montpellier Cedex 5, France.

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http://bmcevolbiol.biomedcentral.com/articles/10.1186/1471-2
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http://dx.doi.org/10.1186/1471-2148-9-248DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2771017PMC
October 2009

A clarified position for Solanum lycopersicum var. cerasiforme in the evolutionary history of tomatoes (solanaceae).

BMC Plant Biol 2008 Dec 20;8:130. Epub 2008 Dec 20.

INRA, UR1052, Unité de Génétique et d'Amélioration des Fruits et Légumes, Montfavet 84 143, France.

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http://dx.doi.org/10.1186/1471-2229-8-130DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2657798PMC
December 2008

Adaptive evolution of the symbiotic gene NORK is not correlated with shifts of rhizobial specificity in the genus Medicago.

BMC Evol Biol 2007 Nov 6;7:210. Epub 2007 Nov 6.

UMR 1097 Diversité et Adaptation des Plantes Cultivées - INRA Montpellier, France.

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http://dx.doi.org/10.1186/1471-2148-7-210DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2247475PMC
November 2007

Dental wear study in a 14th century skull of the Sao tribe, Cameroon.

Coll Antropol 2006 Mar;30(1):13-24

Department of Anatomy, Faculty of Medicine, University of Auvergne, Clermont-Ferrand, France.

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March 2006

Dental contribution to paleo-odontological study of interarch relations in a human fossil.

Coll Antropol 2006 Mar;30(1):25-30

Department of Anatomy, Faculty of Medicine, University of Auvergne, Clermont-Ferrand, France.

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March 2006

Molecular evolution and positive selection of the symbiotic gene NORK in Medicago truncatula.

J Mol Evol 2006 Feb 10;62(2):234-44. Epub 2006 Feb 10.

UMR 1097, Diversité et Génome des Plantes Cultivées, Montpellier, France.

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http://link.springer.com/10.1007/s00239-004-0367-2
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http://dx.doi.org/10.1007/s00239-004-0367-2DOI Listing
February 2006

Dental arch relations analysed in a 14th century fossil skull of the Sao tribe, Cameroon.

Coll Antropol 2005 Dec;29(2):421-7

Department of Anatomy, Faculty of Medicine, University of Auvergne, Clermont-Ferrand, France.

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December 2005

Direct estimation of mutation rate for 10 microsatellite loci in durum wheat, Triticum turgidum (L.) Thell. ssp durum desf.

Mol Biol Evol 2002 Jan;19(1):122-5

INRA-Station de Génétique et d'Amélioration des Plantes, Mauguio, Domaine de Melgueil, 34130 Mauguio, France.

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http://dx.doi.org/10.1093/oxfordjournals.molbev.a003977DOI Listing
January 2002