Publications by authors named "Sven Eyckerman"

37Publications

Pick a Tag and Explore the Functions of Your Pet Protein.

Trends Biotechnol 2019 10 27;37(10):1078-1090. Epub 2019 Apr 27.

VIB Center for Medical Biotechnology, VIB, B-9000, Ghent, Belgium; Department of Biomolecular Medicine, Ghent University, B-9000 Ghent, Belgium. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S01677799193007
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http://dx.doi.org/10.1016/j.tibtech.2019.03.016DOI Listing
October 2019

A protein-protein interaction map of the TNF-induced NF-κB signal transduction pathway.

Sci Data 2018 12 18;5:180289. Epub 2018 Dec 18.

VIB Center for Medical Biotechnology, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1038/sdata.2018.289DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6298254PMC
December 2018

A Well-Controlled BioID Design for Endogenous Bait Proteins.

J Proteome Res 2019 01 10;18(1):95-106. Epub 2018 Dec 10.

VIB Center for Medical Biotechnology, VIB , B-9000 Ghent , Belgium.

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http://dx.doi.org/10.1021/acs.jproteome.8b00367DOI Listing
January 2019

Discovering cellular protein-protein interactions: Technological strategies and opportunities.

Mass Spectrom Rev 2019 01 29;38(1):79-111. Epub 2018 Jun 29.

VIB Center for Medical Biotechnology, VIB, Ghent, Belgium.

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http://dx.doi.org/10.1002/mas.21574DOI Listing
January 2019

High-Confidence Interactome for RNF41 Built on Multiple Orthogonal Assays.

J Proteome Res 2018 04 26;17(4):1348-1360. Epub 2018 Mar 26.

Department of Biochemistry, Faculty of Medicine and Health Sciences , Ghent University , Albert Baertsoenkaai 3 , B-9000 Ghent , Belgium.

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http://pubs.acs.org/doi/10.1021/acs.jproteome.7b00704
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http://dx.doi.org/10.1021/acs.jproteome.7b00704DOI Listing
April 2018

Involvement of the Glucocorticoid Receptor in Pro-inflammatory Transcription Factor Inhibition by Daucane Esters from Laserpitium zernyi.

J Nat Prod 2017 05 10;80(5):1505-1513. Epub 2017 May 10.

Laboratory for Organic and Bio-Organic Synthesis, Department of Organic and Macromolecular Chemistry, Ghent University , Krijgslaan 281 (S.4), B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1021/acs.jnatprod.7b00012DOI Listing
May 2017

Analyzing trapped protein complexes by Virotrap and SFINX.

Nat Protoc 2017 05 30;12(5):881-898. Epub 2017 Mar 30.

VIB-UGent Center for Medical Biotechnology, Ghent, Belgium.

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http://dx.doi.org/10.1038/nprot.2017.014DOI Listing
May 2017

Intelligent Mixing of Proteomes for Elimination of False Positives in Affinity Purification-Mass Spectrometry.

J Proteome Res 2016 10 28;15(10):3929-3937. Epub 2016 Sep 28.

VIB Medical Biotechnology Center , Albert Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1021/acs.jproteome.6b00517DOI Listing
October 2016

Protein complex analysis: From raw protein lists to protein interaction networks.

Mass Spectrom Rev 2017 09 28;36(5):600-614. Epub 2015 Dec 28.

Advanced Database Research and Modelling (ADReM), Department of Mathematics and Computer Science, University of Antwerp, Antwerp, Belgium.

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http://dx.doi.org/10.1002/mas.21485DOI Listing
September 2017

SFINX: Straightforward Filtering Index for Affinity Purification-Mass Spectrometry Data Analysis.

J Proteome Res 2016 Jan 17;15(1):332-8. Epub 2015 Dec 17.

VIB Medical Biotechnology Center , A. Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1021/acs.jproteome.5b00666DOI Listing
January 2016

Proteomics in the genome engineering era.

Proteomics 2016 Jan 20;16(2):177-87. Epub 2015 Dec 20.

VIB Medical Biotechnology Center, Ghent, Belgium.

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http://dx.doi.org/10.1002/pmic.201500262DOI Listing
January 2016

The small GTPase Arf6 is essential for the Tram/Trif pathway in TLR4 signaling.

J Biol Chem 2014 Jan 2;289(3):1364-76. Epub 2013 Dec 2.

From the Department of Medical Protein Research, Cytokine Receptor Lab, VIB, Ghent B-9000, Belgium.

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http://www.jbc.org/lookup/doi/10.1074/jbc.M113.499194
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http://dx.doi.org/10.1074/jbc.M113.499194DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3894321PMC
January 2014

Large-scale protein interactome mapping: strategies and opportunities.

Expert Rev Proteomics 2010 Oct;7(5):679-90

Department of Medical Protein Research, VIB, Albert Baertsoenkaai 3, 9000 Ghent, Belgium.

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http://www.tandfonline.com/doi/full/10.1586/epr.10.30
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http://dx.doi.org/10.1586/epr.10.30DOI Listing
October 2010

Bcl9/Bcl9l are critical for Wnt-mediated regulation of stem cell traits in colon epithelium and adenocarcinomas.

Cancer Res 2010 Aug 3;70(16):6619-28. Epub 2010 Aug 3.

Swiss Institute for Experimental Cancer Research, Swiss National Center of Competence in Research Molecular Oncology, School of Life Sciences, Ecole Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.

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http://dx.doi.org/10.1158/0008-5472.CAN-10-0148DOI Listing
August 2010

BCL9 is an essential component of canonical Wnt signaling that mediates the differentiation of myogenic progenitors during muscle regeneration.

Dev Biol 2009 Nov 21;335(1):93-105. Epub 2009 Aug 21.

Department of Neurology and Neurological Sciences, Stanford University School of Medicine, Stanford, CA 94305-5235, USA.

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http://dx.doi.org/10.1016/j.ydbio.2009.08.014DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3259687PMC
November 2009

Reverse MAPPIT detects disruptors of protein-protein interactions in human cells.

Nat Protoc 2006 ;1(1):92-7

Department of Medical Protein Research, Faculty of Medicine and Health Sciences, Flanders Interuniversity Institute for Biotechnology, VIB09, Ghent University, A. Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1038/nprot.2006.14DOI Listing
June 2007

Two-hybrid and its recent adaptations.

Drug Discov Today Technol 2006 ;3(3):317-24

Flanders Interuniversity Institute for Biotechnology (VIB), Department of Medical Protein Research, Ghent University, Faculty of Medicine and Health Sciences, A. Baertsoenkaai 3, 9000 Ghent, Belgium. Electronic

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http://dx.doi.org/10.1016/j.ddtec.2006.09.006DOI Listing
July 2014

The C-terminus of CIS defines its interaction pattern.

Biochem J 2007 Jan;401(1):257-67

Flanders Interuniversity Institute for Biotechnology, Department of Medical Protein Research (VIB09), Faculty of Medicine and Health Sciences, Ghent University, Baertsoenkaai 3, 9000 Ghent, Belgium.

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http://dx.doi.org/10.1042/BJ20060242DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1698688PMC
January 2007

A complex interaction pattern of CIS and SOCS2 with the leptin receptor.

J Cell Sci 2006 Jun 9;119(Pt 11):2214-24. Epub 2006 May 9.

Department of Medical Protein Research, Faculty of Medicine and Health Sciences, Flanders Interuniversity Institute for Biotechnology, VIB09, Ghent University, Belgium.

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http://dx.doi.org/10.1242/jcs.02947DOI Listing
June 2006

Reverse MAPPIT: screening for protein-protein interaction modifiers in mammalian cells.

Nat Methods 2005 Jun;2(6):427-33

Flanders Interuniversity Institute for Biotechnology, VIB09, Department of Medical Protein Research, Faculty of Medicine and Health Sciences, Ghent University, A. Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1038/nmeth760DOI Listing
June 2005

A systematic scan of interactions with tyrosine motifs in the erythropoietin receptor using a mammalian 2-hybrid approach.

Blood 2005 Jun 11;105(11):4264-71. Epub 2005 Jan 11.

Flanders Interiniversity Institute for Biotechnology, Department of Medical Protein Research, Faculty of Medicine and Health Sciences, Ghent University, Belgium.

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http://dx.doi.org/10.1182/blood-2004-07-2733DOI Listing
June 2005

Heteromeric MAPPIT: a novel strategy to study modification-dependent protein-protein interactions in mammalian cells.

Nucleic Acids Res 2003 Jul;31(14):e75

Department of Medical Protein Research VIB09, Faculty of Medicine and Health Sciences, Ghent University, Albert Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC167658PMC
http://dx.doi.org/10.1093/nar/gng075DOI Listing
July 2003

The ins and outs of leptin receptor activation.

FEBS Lett 2003 Jul;546(1):45-50

The Flanders Interuniversity Institute for Biotechnology, Department of Medical Protein Research (VIB9), Ghent University, Faculty of Medicine and Health Sciences, Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1016/s0014-5793(03)00440-xDOI Listing
July 2003

Design and use of a mammalian protein-protein interaction trap (MAPPIT).

Sci STKE 2002 Dec 10;2002(162):pl18. Epub 2002 Dec 10.

Flanders Interuniversity Institute for Biotechnology, Department of Medical Protein Research (VIB09), Ghent University, Faculty of Medicine and Health Sciences, A. Baertsoenkaai 3, B-9000 Ghent, Belgium.

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http://dx.doi.org/10.1126/stke.2002.162.pl18DOI Listing
December 2002

Methods to map protein interactions in mammalian cells: different tools to address different questions.

Eur Cytokine Netw 2002 Jul-Sep;13(3):276-84

Flanders Interuniversity Institute for Biotechnology, VIB09, Department of Medical Protein Research, Faculty of Medecine and Health Sciences, Ghent University, A. Baertsoenkaai 3, B-9000 Ghent, Belgium.

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March 2003

Comparison of leptin- and interleukin-6-regulated expression of the rPAP gene family: evidence for differential co-regulatory signals.

Eur Cytokine Netw 2002 Jan-Mar;13(1):78-85

Department VIB09, Medical Protein Research, Flanders' Interuniversity Institute for Biotechnology, Faculty of Medicine and Health Sciences, Ghent University, Albert Bartsoenkaai 3, B-9000 Ghent, Belgium.

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September 2002