Surendra Dasari

Surendra Dasari

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Surendra Dasari

Publications by authors named "Surendra Dasari"

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Paraneoplastic Cast Nephropathy Associated With Pancreatic Mixed Acinar-Neuroendocrine Carcinoma: A Case Report.

Am J Kidney Dis 2019 Oct 2;74(4):558-562. Epub 2019 Apr 2.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN.

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https://data.crossref.org/10.1053%2Fj.ajkd.2019.02.010
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http://dx.doi.org/10.1053/j.ajkd.2019.02.010DOI Listing
October 2019

EPA and DHA elicit distinct transcriptional responses to high-fat feeding in skeletal muscle and liver.

Am J Physiol Endocrinol Metab 2019 Sep 2;317(3):E460-E472. Epub 2019 Jul 2.

Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, Rochester, Minnesota.

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http://dx.doi.org/10.1152/ajpendo.00083.2019DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6766610PMC
September 2019

Attenuated activation of the unfolded protein response following exercise in skeletal muscle of older adults.

Aging (Albany NY) 2019 Sep 14;11(18):7587-7604. Epub 2019 Sep 14.

Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.

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http://dx.doi.org/10.18632/aging.102273DOI Listing
September 2019

Distinct influence of omega-3 fatty acids on the plasma metabolome of healthy older adults.

J Gerontol A Biol Sci Med Sci 2019 Jun 4. Epub 2019 Jun 4.

Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, Rochester, Minnesota.

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http://dx.doi.org/10.1093/gerona/glz141DOI Listing
June 2019

Metabolic Syndrome Interferes with Packaging of Proteins within Porcine Mesenchymal Stem Cell-Derived Extracellular Vesicles.

Stem Cells Transl Med 2019 May 1;8(5):430-440. Epub 2019 Feb 1.

Divisions of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1002/sctm.18-0171DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6477000PMC
May 2019

AMPK and PPARβ positive feedback loop regulates endurance exercise training-mediated GLUT4 expression in skeletal muscle.

Am J Physiol Endocrinol Metab 2019 May 19;316(5):E931-E939. Epub 2019 Mar 19.

Department of Health Sciences Research, Mayo Clinic , Rochester, Minnesota.

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http://dx.doi.org/10.1152/ajpendo.00460.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6580175PMC
May 2019

Serum levels of DNAJB9 are elevated in fibrillary glomerulonephritis patients.

Kidney Int 2019 May 1;95(5):1269-1272. Epub 2019 Mar 1.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. Electronic address:

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http://dx.doi.org/10.1016/j.kint.2019.01.024DOI Listing
May 2019

A Patient With Hereditary ATTR and a Novel AGel p.Ala578Pro Amyloidosis.

Mayo Clin Proc 2018 11 7;93(11):1678-1682. Epub 2018 Aug 7.

Division of Hematology, Department of Internal Medicine, Mayo Clinic, Rochester, MN. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S00256196183049
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http://dx.doi.org/10.1016/j.mayocp.2018.06.016DOI Listing
November 2018

Remodeling of skeletal muscle mitochondrial proteome with high-fat diet involves greater changes to β-oxidation than electron transfer proteins in mice.

Am J Physiol Endocrinol Metab 2018 10 29;315(4):E425-E434. Epub 2018 May 29.

School of Biological and Population Health Sciences, College of Public Health and Human Sciences, Oregon State University , Corvallis, Oregon.

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http://dx.doi.org/10.1152/ajpendo.00051.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6230708PMC
October 2018

Proteogenomic Re-Annotation of Coccidioides posadasii Strain Silveira.

Proteomics 2018 01 14;18(1). Epub 2017 Dec 14.

School of Life Sciences, Mayo Clinic Collaborative Research Building, Arizona State University, Scottsdale, AZ, USA.

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http://dx.doi.org/10.1002/pmic.201700173DOI Listing
January 2018

The utility of MASS-FIX to detect and monitor monoclonal proteins in the clinic.

Am J Hematol 2017 Aug 1;92(8):772-779. Epub 2017 Jun 1.

Division of Hematology, Mayo Clinic, Rochester, Minnesota.

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http://dx.doi.org/10.1002/ajh.24772DOI Listing
August 2017

Acquired transthyretin amyloidosis after domino liver transplant: Phenotypic correlation, implication of liver retransplantation.

J Neurol Sci 2017 Aug 13;379:192-197. Epub 2017 Jun 13.

Division of Hematology, Mayo Clinic, Rochester, MN, USA. Electronic address:

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http://dx.doi.org/10.1016/j.jns.2017.06.013DOI Listing
August 2017

CircularLogo: A lightweight web application to visualize intra-motif dependencies.

BMC Bioinformatics 2017 May 22;18(1):269. Epub 2017 May 22.

Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1186/s12859-017-1680-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5440937PMC
May 2017

Clinical, biopsy, and mass spectrometry findings of renal gelsolin amyloidosis.

Kidney Int 2017 04 29;91(4):964-971. Epub 2017 Jan 29.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA.

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http://dx.doi.org/10.1016/j.kint.2016.11.017DOI Listing
April 2017

Total and Lectin-Binding Proteome of Spherulin from Coccidioides posadasii.

J Proteome Res 2016 10 29;15(10):3463-3472. Epub 2016 Aug 29.

School of Life Sciences, Mayo Clinic Collaborative Research Building, Arizona State University , Scottsdale, Arizona 85259, United States.

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http://dx.doi.org/10.1021/acs.jproteome.5b01054DOI Listing
October 2016

Clinical, biopsy, and mass spectrometry characteristics of renal apolipoprotein A-IV amyloidosis.

Kidney Int 2016 09 2;90(3):658-64. Epub 2016 Jun 2.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, Minnesota, USA. Electronic address:

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http://dx.doi.org/10.1016/j.kint.2016.04.003DOI Listing
September 2016

Functional and proteomic alterations of plasma high density lipoproteins in type 1 diabetes mellitus.

Metabolism 2016 09 29;65(9):1421-31. Epub 2016 Jun 29.

Division of Endocrinology and Metabolism, Mayo Clinic, Rochester, MN, USA. Electronic address:

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http://dx.doi.org/10.1016/j.metabol.2016.06.008DOI Listing
September 2016

C4 Glomerulopathy: A Disease Entity Associated With C4d Deposition.

Am J Kidney Dis 2016 Jun 17;67(6):949-53. Epub 2016 Feb 17.

Department of Pathology, Brigham and Women's Hospital, Boston, MA.

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http://dx.doi.org/10.1053/j.ajkd.2016.01.012DOI Listing
June 2016

Leukocyte chemotactic factor 2 amyloidosis (ALECT2) is a common form of renal amyloidosis among Egyptians.

Mod Pathol 2016 Apr 12;29(4):416-20. Epub 2016 Feb 12.

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1038/modpathol.2016.29DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5411489PMC
April 2016

Label-Free Proteomic Analysis of Protein Changes in the Striatum during Chronic Ethanol Use and Early Withdrawal.

Front Behav Neurosci 2016 11;10:46. Epub 2016 Mar 11.

Neurobiology of Disease PhD Program, Mayo Graduate School, Mayo ClinicRochester, MN, USA; Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Graduate School, Mayo Clinic College of MedicineRochester, MN, USA; Department of Psychiatry and Psychology, Mayo Clinic College of MedicineRochester, MN, USA.

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http://dx.doi.org/10.3389/fnbeh.2016.00046DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4786553PMC
March 2016

Predictors of Whole-Body Insulin Sensitivity Across Ages and Adiposity in Adult Humans.

J Clin Endocrinol Metab 2016 Feb 28;101(2):626-34. Epub 2015 Dec 28.

Divisions of Endocrinology and Metabolism (A.Z.L., M.L.J., M.M.R., A.R.K., K.D., R.R.E., K.S.N., I.R.L.), Biomedical Statistics and Informatics (S.D.), and Radiology (J.D.P., M.T.G.), Mayo Clinic College of Medicine, Rochester, Minnesota 55905.

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http://dx.doi.org/10.1210/jc.2015-2892DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880121PMC
February 2016

Measure transcript integrity using RNA-seq data.

BMC Bioinformatics 2016 Feb 3;17:58. Epub 2016 Feb 3.

Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, 55905, USA.

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http://dx.doi.org/10.1186/s12859-016-0922-zDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4739097PMC
February 2016

Morphologic Features of ALK-negative Anaplastic Large Cell Lymphomas With DUSP22 Rearrangements.

Am J Surg Pathol 2016 Jan;40(1):36-43

*Department of Laboratory Medicine and Pathology ††Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN †Hematopathology Section, Laboratory of Pathology, National Cancer Institute, Bethesda, MD ‡Department of Pathology, David Geffen School of Medicine, University of California, Los Angeles, CA §Division of Hematopathology, University of Pittsburgh Medical Center, Pittsburgh, PA ∥Department of Pathology and Laboratory Medicine, United Health Services Hospitals, Johnson City/Binghamton #Department of Pathology and Laboratory Medicine, Centrex Clinical Laboratories, Utica, NY ¶Department of Clinical Pathology, Cleveland Clinic, Cleveland, OH **Department of Laboratory Medicine and Pathology, Mayo Clinic, Jacksonville, FL ‡‡Department of Pathology, Duke University, Durham, NC.

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http://dx.doi.org/10.1097/PAS.0000000000000500DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4834837PMC
January 2016

Subset of Kappa and Lambda Germline Sequences Result in Light Chains with a Higher Molecular Mass Phenotype.

J Proteome Res 2015 Dec 24;14(12):5283-90. Epub 2015 Nov 24.

Department of Medical Biochemistry & Biophysics, Karolinska Institutet , Stockholm, Sweden.

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http://dx.doi.org/10.1021/acs.jproteome.5b00711DOI Listing
December 2015

Eicosapentaenoic acid but not docosahexaenoic acid restores skeletal muscle mitochondrial oxidative capacity in old mice.

Aging Cell 2015 Oct 25;14(5):734-43. Epub 2015 May 25.

Division of Endocrinology and Metabolism, Mayo Clinic College of Medicine, Rochester, MN, USA.

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http://dx.doi.org/10.1111/acel.12352DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4568961PMC
October 2015

Proteomic detection of immunoglobulin light chain variable region peptides from amyloidosis patient biopsies.

J Proteome Res 2015 Apr 20;14(4):1957-67. Epub 2015 Mar 20.

†Department of Health Sciences Research, ‡Department of Laboratory Medicine and Pathology, §Information Technology Administration, and ∥Department of Immunology and Division of Hematology, Mayo Clinic, 200 First Street SW, Rochester, Minnesota 55905, United States.

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http://dx.doi.org/10.1021/acs.jproteome.5b00015DOI Listing
April 2015

Phenotyping polyclonal kappa and lambda light chain molecular mass distributions in patient serum using mass spectrometry.

J Proteome Res 2014 Nov 26;13(11):5198-205. Epub 2014 Aug 26.

Department of Laboratory Medicine and Pathology, ‡Biomedical Statistics and Informatics, §Department of Biochemistry and Molecular Biology, ∥Department of Immunology, and ⊥Department of Medicine, Mayo Clinic , Rochester, Minnesota 55905, United States.

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http://dx.doi.org/10.1021/pr5005967DOI Listing
November 2014

Clinical diagnosis and typing of systemic amyloidosis in subcutaneous fat aspirates by mass spectrometry-based proteomics.

Haematologica 2014 Jul 18;99(7):1239-47. Epub 2014 Apr 18.

Department of Laboratory Medicine and Pathology Memorial Sloan-Kettering Cancer Center, New York, NY, USA (current affiliation)

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http://dx.doi.org/10.3324/haematol.2013.102764DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4077087PMC
July 2014

Clinical proteome informatics workbench detects pathogenic mutations in hereditary amyloidoses.

J Proteome Res 2014 May 3;13(5):2352-8. Epub 2014 Apr 3.

Department of Health Sciences Research, ‡Department of Laboratory Medicine and Pathology, §Mayo Proteomics Core, and ∥Department of Molecular Genetics, Mayo Clinic , Rochester 55905, Minnesota, United States.

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http://dx.doi.org/10.1021/pr4011475DOI Listing
May 2014

Using mass spectrometry to monitor monoclonal immunoglobulins in patients with a monoclonal gammopathy.

J Proteome Res 2014 Mar 11;13(3):1419-27. Epub 2014 Feb 11.

Department of Laboratory Medicine and Pathology and ‡Biomedical Statistics and Informatics, Mayo Clinic , Rochester, Minnesota 55905, United States.

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http://dx.doi.org/10.1021/pr400985kDOI Listing
March 2014

Informatics of protein and posttranslational modification detection via shotgun proteomics.

Methods Mol Biol 2013 ;1002:167-79

Vanderbilt University Medical Center, Nashville, TN, USA.

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http://dx.doi.org/10.1007/978-1-62703-360-2_14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4012295PMC
February 2014

Shotgun-proteomics-based clinical testing for diagnosis and classification of amyloidosis.

J Mass Spectrom 2013 Oct;48(10):1067-77

Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.

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http://dx.doi.org/10.1002/jms.3264DOI Listing
October 2013

CPAT: Coding-Potential Assessment Tool using an alignment-free logistic regression model.

Nucleic Acids Res 2013 Apr 17;41(6):e74. Epub 2013 Jan 17.

Division of Biomedical Statistics and Informatics, Mayo Clinic College of Medicine, Rochester, MN 55905, USA.

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http://dx.doi.org/10.1093/nar/gkt006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3616698PMC
April 2013

Basophile: accurate fragment charge state prediction improves peptide identification rates.

Genomics Proteomics Bioinformatics 2013 Apr 8;11(2):86-95. Epub 2013 Mar 8.

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.

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http://dx.doi.org/10.1016/j.gpb.2012.11.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3737598PMC
April 2013

IgG Fab fragments forming bivalent complexes by a conformational mechanism that is reversible by osmolytes.

J Biol Chem 2012 Dec 29;287(51):42936-50. Epub 2012 Oct 29.

Department of Immunology, Center for Individualized Medicine, Mayo Clinic College of Medicine, Rochester, Minnesota 55905, USA.

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http://dx.doi.org/10.1074/jbc.M112.410217DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3522289PMC
December 2012

Mapping serum albumin adducts of the food-borne carcinogen 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine by data-dependent tandem mass spectrometry.

Chem Res Toxicol 2012 Oct 14;25(10):2179-93. Epub 2012 Aug 14.

Division of Environmental Health Sciences, Wadsworth Center, New York State Department of Health , Albany, New York 12201, USA.

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http://dx.doi.org/10.1021/tx300253jDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3544159PMC
October 2012

Refining comparative proteomics by spectral counting to account for shared peptides and multiple search engines.

Anal Bioanal Chem 2012 Sep 3;404(4):1115-25. Epub 2012 May 3.

Department of Biomedical Informatics, Vanderbilt University Medical School, Nashville, TN 37232-8575, USA.

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http://dx.doi.org/10.1007/s00216-012-6011-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3717168PMC
September 2012

QuaMeter: multivendor performance metrics for LC-MS/MS proteomics instrumentation.

Anal Chem 2012 Jul 27;84(14):5845-50. Epub 2012 Jun 27.

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee 37232-8575, United States.

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http://dx.doi.org/10.1021/ac300629pDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3730131PMC
July 2012

Pepitome: evaluating improved spectral library search for identification complementarity and quality assessment.

J Proteome Res 2012 Mar 27;11(3):1686-95. Epub 2012 Jan 27.

Department of Biomedical Informatics, Vanderbilt University Medical Center , Nashville, Tennessee 37232-8575, United States.

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http://pubs.acs.org/doi/10.1021/pr200874e
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http://dx.doi.org/10.1021/pr200874eDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3292681PMC
March 2012

Sequence tagging reveals unexpected modifications in toxicoproteomics.

Chem Res Toxicol 2011 Feb 7;24(2):204-16. Epub 2011 Jan 7.

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee 37232-0006, United States.

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http://dx.doi.org/10.1021/tx100275tDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3042045PMC
February 2011

Comprehensive maternal serum proteomic profiles of preclinical and clinical preeclampsia.

J Proteome Res 2010 Aug;9(8):4274-81

Departments of Obstetrics and Gynecology, Pediatrics, Public Health and Preventive Medicine, Oregon Health & Science University, Portland, Oregon 97239, USA.

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http://dx.doi.org/10.1021/pr100198mDOI Listing
August 2010

Noninvasive diagnosis of intraamniotic infection: proteomic biomarkers in vaginal fluid.

Am J Obstet Gynecol 2010 Jul 15;203(1):32.e1-8. Epub 2010 May 15.

Department of Obstetrics/Gynecology, University of Washington, Seattle, WA, USA.

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http://dx.doi.org/10.1016/j.ajog.2010.03.037DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4128483PMC
July 2010

TagRecon: high-throughput mutation identification through sequence tagging.

J Proteome Res 2010 Apr;9(4):1716-26

Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee 37232-8340, USA.

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http://dx.doi.org/10.1021/pr900850mDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2859315PMC
April 2010

The bis-electrophile diepoxybutane cross-links DNA to human histones but does not result in enhanced mutagenesis in recombinant systems.

Chem Res Toxicol 2009 Jun;22(6):1069-76

Department of Biochemistry and Center in Molecular Toxicology, Vanderbilt University School of Medicine, Nashville, Tennessee 37232-0146, USA.

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http://pubs.acs.org/doi/abs/10.1021/tx900037u
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http://dx.doi.org/10.1021/tx900037uDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2696559PMC
June 2009

Quantification of isotopically overlapping deamidated and 18o-labeled peptides using isotopic envelope mixture modeling.

J Proteome Res 2009 Mar;8(3):1263-70

Department of Pediatrics, and Department of Biochemistry and Molecular Biology, School of Medicine, Oregon Health and Science University, 3181 Southwest Sam Jackson Park Road, Portland, Oregon 97239, USA.

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http://dx.doi.org/10.1021/pr801054wDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2693468PMC
March 2009

Proteomic identification of salivary biomarkers of type-2 diabetes.

J Proteome Res 2009 Jan;8(1):239-45

Departments of Endocrinology and Metabolism and Medicine, Nizam's Institute of Medical Sciences University, Hyderabad 500 082, India.

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http://dx.doi.org/10.1021/pr8003776DOI Listing
January 2009

Accurate annotation of peptide modifications through unrestrictive database search.

J Proteome Res 2008 Jan 23;7(1):170-81. Epub 2007 Nov 23.

Bioinformatics Program, University of California San Diego, La Jolla, California 92093, USA.

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http://dx.doi.org/10.1021/pr070444vDOI Listing
January 2008

Reliable detection of deamidated peptides from lens crystallin proteins using changes in reversed-phase elution times and parent ion masses.

J Proteome Res 2007 Sep 14;6(9):3819-26. Epub 2007 Aug 14.

Department of Pediatrics, School of Medicine, Oregon Health & Science University, 3181 SW Sam Jackson Park Road, Portland, Oregon 97239, USA.

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http://dx.doi.org/10.1021/pr070182xDOI Listing
September 2007