Sunita Kumari

Sunita Kumari

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Sunita Kumari

Sunita Kumari

Publications by authors named "Sunita Kumari"

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40Publications

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Deciphering genome-wide WRKY gene family of Triticum aestivum L. and their functional role in response to Abiotic stress.

Genes Genomics 2019 01 20;41(1):79-94. Epub 2018 Sep 20.

Department of Applied Sciences, Indian Institute of Information Technology, Deoghat, Jhalwa, Allahabad, 211015, India.

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http://dx.doi.org/10.1007/s13258-018-0742-9DOI Listing
January 2019

Sofosbuvir with NS5A inhibitors in hepatitis C virus infection with severe renal insufficiency.

J Viral Hepat 2018 Dec 11;25(12):1501-1506. Epub 2018 Sep 11.

Department of Hepatology, Post Graduate Institute of Medical Education and Research, Chandigarh, India.

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http://doi.wiley.com/10.1111/jvh.12983
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http://dx.doi.org/10.1111/jvh.12983DOI Listing
December 2018

Hypermethylated LATS2 gene with decreased expression in female breast cancer: A case control study from North India.

Gene 2018 Nov 17;676:156-163. Epub 2018 Jul 17.

Department of Biosciences, Jamia Millia Islamia, New Delhi, India. Electronic address:

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http://dx.doi.org/10.1016/j.gene.2018.07.033DOI Listing
November 2018

KBase: The United States Department of Energy Systems Biology Knowledgebase.

Nat Biotechnol 2018 07;36(7):566-569

Computer Science and Math, Computer Science Initiative, Brookhaven National Laboratory, Upton, New York, USA.

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http://dx.doi.org/10.1038/nbt.4163DOI Listing
July 2018

Has the time come for using MELD-Sarcopenia score?

J Hepatol 2018 06 4;68(6):1324. Epub 2018 Apr 4.

Department of Hepatology, Post Graduate Institute of Medical Education and Research, Chandigarh, India. Electronic address:

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http://dx.doi.org/10.1016/j.jhep.2018.01.041DOI Listing
June 2018

Effect of Urea on Solvation Dynamics and Rotational Relaxation of Coumarin 480 in Aqueous Micelles of Cationic Gemini Surfactants with Different Spacer Groups.

ACS Omega 2018 Mar 14;3(3):3079-3095. Epub 2018 Mar 14.

Department of Chemistry, Birla Institute of Technology & Science (BITS), Pilani, Pilani Campus, Pilani, Rajasthan 333031, India.

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http://dx.doi.org/10.1021/acsomega.7b01747DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6044790PMC
March 2018

The Plastid and Mitochondrial Peptidase Network in : A Foundation for Testing Genetic Interactions and Functions in Organellar Proteostasis.

Plant Cell 2017 Nov 25;29(11):2687-2710. Epub 2017 Sep 25.

School for Integrative Plant Sciences, Section Plant Biology, Cornell University, Ithaca, New York 14853

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http://dx.doi.org/10.1105/tpc.17.00481DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5728138PMC
November 2017

Demixing of active particles in the presence of external fields.

J Chem Phys 2017 Nov;147(17):174702

Departamento de Fisica, Faculdade de Ciencias, Universidade de Lisboa, P-1749-016 Lisboa, Portugal and Centro de Fisica Teorica e Computational, Universidade de Lisboa, P-1749-016 Lisboa, Portugal.

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http://dx.doi.org/10.1063/1.4992797DOI Listing
November 2017

Effect of Hydrophobicity of Tails and Hydrophilicity of Spacer Group of Cationic Gemini Surfactants on Solvation Dynamics and Rotational Relaxation of Coumarin 480 in Aqueous Micelles.

ACS Omega 2017 Sep 18;2(9):5898-5910. Epub 2017 Sep 18.

Department of Chemistry, Birla Institute of Technology & Science (BITS) Pilani, Pilani Campus, Pilani, Rajasthan 333031, India.

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http://dx.doi.org/10.1021/acsomega.7b00818DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6644576PMC
September 2017

Large-scale atlas of microarray data reveals the distinct expression landscape of different tissues in Arabidopsis.

Plant J 2016 06;86(6):472-80

Biology Department, Brookhaven National Laboratory, Upton, NY, 11973, USA.

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http://dx.doi.org/10.1111/tpj.13175DOI Listing
June 2016

Patterns and Predictors of Premenstrual Symptoms among Females Working in a Psychiatry Hospital.

Scientifica (Cairo) 2016 16;2016:6943852. Epub 2016 May 16.

Department of Psychiatry, ESIC Medical College and Hospital, NH-3, NIT, Faridabad, Haryana 121001, India.

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http://dx.doi.org/10.1155/2016/6943852DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4884805PMC
June 2016

Inhibition of acetylcholinesterase and cytochrome oxidase activity in Fasciola gigantica cercaria by phytoconstituents.

Acta Trop 2016 Feb 1;154:19-24. Epub 2015 Nov 1.

Malacology Laboratory, Department of Zoology, DDU Gorakhpur University, Gorakhpur, 273009 Uttar Pradesh, India. Electronic address:

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http://dx.doi.org/10.1016/j.actatropica.2015.10.021DOI Listing
February 2016

Genome-wide computational prediction and analysis of core promoter elements across plant monocots and dicots.

PLoS One 2013 29;8(10):e79011. Epub 2013 Oct 29.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0079011PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3812177PMC
February 2015

Gramene 2013: comparative plant genomics resources.

Nucleic Acids Res 2014 Jan 11;42(Database issue):D1193-9. Epub 2013 Nov 11.

Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, USA, Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR 97331, USA, EMBL-European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton CB10 1SD, UK, Informatics and Bio-computing Program, Ontario Institute of Cancer Research, Toronto M5G 1L7, Canada, Department of Biochemistry & Molecular Pharmacology, NYU School of Medicine, New York, NY 10016, USA and NAA Plant, Soil & Nutrition Laboratory Research Unit, USDA-ARS, Ithaca, NY 14853, USA.

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http://dx.doi.org/10.1093/nar/gkt1110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3964986PMC
January 2014

Characterization of miRNAs in response to short-term waterlogging in three inbred lines of Zea mays.

PLoS One 2012 29;7(6):e39786. Epub 2012 Jun 29.

National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, Hubei, People's Republic of China.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0039786PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3387268PMC
November 2012

Fascioliasis control: in vivo and in vitro phytotherapy of vector snail to kill fasciola larva.

J Parasitol Res 2011 23;2011:240807. Epub 2011 Oct 23.

Malacology Laboratory, Department of Zoology, DDU Gorakhpur University, Gorakhpur 273009, India.

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http://dx.doi.org/10.1155/2011/240807DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3202095PMC
August 2012

Molecular characterization of hot spring cyanobacteria and evaluation of their photoprotective compounds.

Can J Microbiol 2012 Jun 14;58(6):719-27. Epub 2012 May 14.

Laboratory of Photobiology and Molecular Microbiology, Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi-221005, India.

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http://dx.doi.org/10.1139/w2012-044DOI Listing
June 2012

Functional annotation of the transcriptome of Sorghum bicolor in response to osmotic stress and abscisic acid.

BMC Genomics 2011 Oct 18;12:514. Epub 2011 Oct 18.

Department of Horticulture, Texas A&M University, College Station, TX 77843, USA.

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http://dx.doi.org/10.1186/1471-2164-12-514DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3219791PMC
October 2011

Pervasive gene content variation and copy number variation in maize and its undomesticated progenitor.

Genome Res 2010 Dec 29;20(12):1689-99. Epub 2010 Oct 29.

Department of Plant Biology, University of Minnesota, Saint Paul, Minnesota 55108, USA.

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http://dx.doi.org/10.1101/gr.109165.110DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2989995PMC
December 2010

Small-molecule-mediated G-quadruplex isolation from human cells.

Nat Chem 2010 Dec 10;2(12):1095-8. Epub 2010 Oct 10.

Department of Chemistry, The University of Cambridge, Cambridge CB2 1EW, UK.

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http://dx.doi.org/10.1038/nchem.842DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3119466PMC
December 2010

Small molecule-mediated inhibition of translation by targeting a native RNA G-quadruplex.

Org Biomol Chem 2010 Jun 30;8(12):2771-6. Epub 2010 Apr 30.

Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge, UKCB2 1EW.

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http://dx.doi.org/10.1039/c002418jDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3074098PMC
June 2010

A genome-wide characterization of microRNA genes in maize.

PLoS Genet 2009 Nov 20;5(11):e1000716. Epub 2009 Nov 20.

Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, United States of America.

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http://dx.doi.org/10.1371/journal.pgen.1000716DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2773440PMC
November 2009

The B73 maize genome: complexity, diversity, and dynamics.

Authors:
Patrick S Schnable Doreen Ware Robert S Fulton Joshua C Stein Fusheng Wei Shiran Pasternak Chengzhi Liang Jianwei Zhang Lucinda Fulton Tina A Graves Patrick Minx Amy Denise Reily Laura Courtney Scott S Kruchowski Chad Tomlinson Cindy Strong Kim Delehaunty Catrina Fronick Bill Courtney Susan M Rock Eddie Belter Feiyu Du Kyung Kim Rachel M Abbott Marc Cotton Andy Levy Pamela Marchetto Kerri Ochoa Stephanie M Jackson Barbara Gillam Weizu Chen Le Yan Jamey Higginbotham Marco Cardenas Jason Waligorski Elizabeth Applebaum Lindsey Phelps Jason Falcone Krishna Kanchi Thynn Thane Adam Scimone Nay Thane Jessica Henke Tom Wang Jessica Ruppert Neha Shah Kelsi Rotter Jennifer Hodges Elizabeth Ingenthron Matt Cordes Sara Kohlberg Jennifer Sgro Brandon Delgado Kelly Mead Asif Chinwalla Shawn Leonard Kevin Crouse Kristi Collura Dave Kudrna Jennifer Currie Ruifeng He Angelina Angelova Shanmugam Rajasekar Teri Mueller Rene Lomeli Gabriel Scara Ara Ko Krista Delaney Marina Wissotski Georgina Lopez David Campos Michele Braidotti Elizabeth Ashley Wolfgang Golser HyeRan Kim Seunghee Lee Jinke Lin Zeljko Dujmic Woojin Kim Jayson Talag Andrea Zuccolo Chuanzhu Fan Aswathy Sebastian Melissa Kramer Lori Spiegel Lidia Nascimento Theresa Zutavern Beth Miller Claude Ambroise Stephanie Muller Will Spooner Apurva Narechania Liya Ren Sharon Wei Sunita Kumari Ben Faga Michael J Levy Linda McMahan Peter Van Buren Matthew W Vaughn Kai Ying Cheng-Ting Yeh Scott J Emrich Yi Jia Ananth Kalyanaraman An-Ping Hsia W Brad Barbazuk Regina S Baucom Thomas P Brutnell Nicholas C Carpita Cristian Chaparro Jer-Ming Chia Jean-Marc Deragon James C Estill Yan Fu Jeffrey A Jeddeloh Yujun Han Hyeran Lee Pinghua Li Damon R Lisch Sanzhen Liu Zhijie Liu Dawn Holligan Nagel Maureen C McCann Phillip SanMiguel Alan M Myers Dan Nettleton John Nguyen Bryan W Penning Lalit Ponnala Kevin L Schneider David C Schwartz Anupma Sharma Carol Soderlund Nathan M Springer Qi Sun Hao Wang Michael Waterman Richard Westerman Thomas K Wolfgruber Lixing Yang Yeisoo Yu Lifang Zhang Shiguo Zhou Qihui Zhu Jeffrey L Bennetzen R Kelly Dawe Jiming Jiang Ning Jiang Gernot G Presting Susan R Wessler Srinivas Aluru Robert A Martienssen Sandra W Clifton W Richard McCombie Rod A Wing Richard K Wilson

Science 2009 Nov;326(5956):1112-5

Center for Plant Genomics, Iowa State University, Ames, IA 50011, USA.

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http://www.dawelab.org/wp-content/uploads/2011/03/schnable-2
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http://www.sciencemag.org/cgi/doi/10.1126/science.1178534
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http://dx.doi.org/10.1126/science.1178534DOI Listing
November 2009

Position and stability are determining factors for translation repression by an RNA G-quadruplex-forming sequence within the 5' UTR of the NRAS proto-oncogene.

Biochemistry 2008 Dec;47(48):12664-9

Department of Chemistry, University of Cambridge, Lensfield Road, Cambridge CB2 1EW, United Kingdom.

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http://dx.doi.org/10.1021/bi8010797DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2746962PMC
December 2008

G-quadruplexes: the beginning and end of UTRs.

Nucleic Acids Res 2008 Nov 2;36(19):6260-8. Epub 2008 Oct 2.

Cavendish Laboratory, University of Cambridge, JJ Thompson Ave, Cambridge, UK.

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http://dx.doi.org/10.1093/nar/gkn511DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2577360PMC
November 2008

Mycosporine-like amino acids (MAAs): chemical structure, biosynthesis and significance as UV-absorbing/screening compounds.

Indian J Exp Biol 2008 Jan;46(1):7-17

Centre of Advanced Study in Botany, Banaras Hindu University, Varanasi 221 005, India.

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January 2008

AffyMAPSDetector: a software tool to characterize Affymetrix GeneChip expression arrays with respect to SNPs.

BMC Bioinformatics 2007 Jul 30;8:276. Epub 2007 Jul 30.

Department of Computer and Information Science, Indiana University Purdue University Indianapolis, Indianapolis, IN, 46202, USA.

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http://dx.doi.org/10.1186/1471-2105-8-276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1959249PMC
July 2007

An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation.

Nat Chem Biol 2007 Apr 25;3(4):218-21. Epub 2007 Feb 25.

University Chemical Laboratory, Lensfield Road, Cambridge CB2 1EW, UK.

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http://dx.doi.org/10.1038/nchembio864DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2206252PMC
April 2007

1-Ethyl-3-(3-dimethylaminopropyl) carbodiimide interference with Lowry method.

Anal Biochem 2005 Jan;336(1):132-4

Biomolecular Electronics and Nanotechnology Division (BEND), Central Scientific Instruments Organisation (CSIO), Sector 30-C, Chandigarh 160030, India.

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http://dx.doi.org/10.1016/j.ab.2004.09.038DOI Listing
January 2005