Subhajyoti De

Subhajyoti De

UNVERIFIED PROFILE

Are you Subhajyoti De?   Register this Author

Register author
Subhajyoti De

Subhajyoti De

Publications by authors named "Subhajyoti De"

Are you Subhajyoti De?   Register this Author

61Publications

1319Reads

8Profile Views

Understanding the role of phenotypic switching in cancer drug resistance.

J Theor Biol 2020 Apr 14;490:110162. Epub 2020 Jan 14.

School of Mathematics, University of Minnesota, Twin Cities, MN 55455, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.jtbi.2020.110162DOI Listing
April 2020

Loss of Setd4 delays radiation-induced thymic lymphoma in mice.

DNA Repair (Amst) 2020 02 25;86:102754. Epub 2019 Nov 25.

Rutgers Cancer Institute of New Jersey, Department of Radiation Oncology, Rutgers Robert Wood Johnson Medical School, 195 Little Albany Street, New Brunswick, NJ 08903, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.dnarep.2019.102754DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6960333PMC
February 2020

DNA polymerase η mutational signatures are found in a variety of different types of cancer.

Cell Cycle 2018 15;17(3):348-355. Epub 2018 Feb 15.

g Eppley Institute for Research in Cancer and Allied Diseases , University of Nebraska Medical Center , Omaha , NE 68198, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1080/15384101.2017.1404208DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5914734PMC
September 2019

FERMI: A Novel Method for Sensitive Detection of Rare Mutations in Somatic Tissue.

G3 (Bethesda) 2019 09 4;9(9):2977-2987. Epub 2019 Sep 4.

Department of Biochemistry and Molecular Genetics, University of Colorado School of Medicine, Aurora, CO 80045

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1534/g3.119.400438DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6723130PMC
September 2019

Activation of S6 signaling is associated with cell survival and multinucleation in hyperplastic skin after epidermal loss of AURORA-A Kinase.

Cell Death Differ 2019 03 26;26(3):548-564. Epub 2018 Jul 26.

Department of Dermatology and the Gates Center for Regenerative Medicine, University of Colorado Anschutz Medical Campus, Aurora, CO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41418-018-0167-7DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370802PMC
March 2019

Revisiting signatures of neutral tumor evolution in the light of complexity of cancer genomic data.

Nat Genet 2018 12;50(12):1626-1628

Rutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/s41588-018-0219-4DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6952740PMC
December 2018

Mutation Signatures Depend on Epigenomic Contexts.

Trends Cancer 2018 10 6;4(10):659-661. Epub 2018 Sep 6.

Rutgers Cancer Institute, Rutgers the State University of New Jersey, New Brunswick, NJ 08901, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.trecan.2018.08.001DOI Listing
October 2018

Dissecting the sources of gene expression variation in a pan-cancer analysis identifies novel regulatory mutations.

Nucleic Acids Res 2018 05;46(9):4370-4381

Center for Systems and Computational Biology, Rutgers Cancer Institute of New Jersey, Rutgers the State University of New Jersey. New Brunswick, NJ 08901, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gky271DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5961375PMC
May 2018

Nuclear topology modulates the mutational landscapes of cancer genomes.

Nat Struct Mol Biol 2017 Nov 2;24(11):1000-1006. Epub 2017 Oct 2.

Rutgers Cancer Institute of New Jersey, New Brunswick, New Jersey, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nsmb.3474DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744871PMC
November 2017

IMPACT: a whole-exome sequencing analysis pipeline for integrating molecular profiles with actionable therapeutics in clinical samples.

J Am Med Inform Assoc 2016 07 28;23(4):721-30. Epub 2016 Mar 28.

Division of Medical Oncology, Department of Medicine, School of Medicine Department of Biostatistics and Informatics, Colorado School of Public Health University of Colorado Cancer Center All: University of Colorado Anschutz Medical Campus, Aurora, CO 80045, USA

View Article

Download full-text PDF

Source
https://academic.oup.com/jamia/article-lookup/doi/10.1093/ja
Publisher Site
http://dx.doi.org/10.1093/jamia/ocw022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4926746PMC
July 2016

HUWE1 interacts with PCNA to alleviate replication stress.

EMBO Rep 2016 06 4;17(6):874-86. Epub 2016 May 4.

Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA

View Article

Download full-text PDF

Source
http://embor.embopress.org/lookup/doi/10.15252/embr.20154168
Publisher Site
http://dx.doi.org/10.15252/embr.201541685DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5278616PMC
June 2016

Significance of duon mutations in cancer genomes.

Sci Rep 2016 06 8;6:27437. Epub 2016 Jun 8.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/srep27437DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4897603PMC
June 2016

SomVarIUS: somatic variant identification from unpaired tissue samples.

Bioinformatics 2016 03 20;32(6):808-13. Epub 2015 Nov 20.

Department of Medicine, Department of Pharmacology, Department of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btv685DOI Listing
March 2016

Expression Profiling of Macrophages Reveals Multiple Populations with Distinct Biological Roles in an Immunocompetent Orthotopic Model of Lung Cancer.

J Immunol 2016 Mar 12;196(6):2847-59. Epub 2016 Feb 12.

Department of Medicine, University of Colorado Denver, Aurora, CO 80045; Department of Pharmacology, University of Colorado Denver, Aurora, CO 80045

View Article

Download full-text PDF

Source
http://dx.doi.org/10.4049/jimmunol.1502364DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4779748PMC
March 2016

The landscape of somatic mutations in protein coding genes in apparently benign human tissues carries signatures of relaxed purifying selection.

Nucleic Acids Res 2016 Mar 15;44(5):2075-84. Epub 2016 Feb 15.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA Molecular Oncology Program, University of Colorado Cancer Center, Aurora, CO 80045, USA Department of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO 80045, USA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkw086DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4797307PMC
March 2016

Signatures of accelerated somatic evolution in gene promoters in multiple cancer types.

Nucleic Acids Res 2015 Jun 1;43(11):5307-17. Epub 2015 May 1.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA Computational Biosciences Program, University of Colorado-Denver, Aurora, CO, USA University of Colorado Cancer Center, Aurora, CO, USA Department of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO, USA

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkv419DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4477653PMC
June 2015

Polyploidy can drive rapid adaptation in yeast.

Nature 2015 Mar 2;519(7543):349-52. Epub 2015 Mar 2.

1] Department of Pediatric Oncology, Dana-Farber Cancer Institute, 450 Brookline Avenue, Boston, Massachusetts 02215, USA [2] Department of Cell Biology, Harvard Medical School, 25 Shattuck Street, Boston, Massachusetts 02215, USA [3] Howard Hughes Medical Institute, 4000 Jones Bridge Road, Chevy Chase, Maryland 20815, USA [4] Department of Pediatric Hematology/Oncology, Children's Hospital, 300 Longwood Avenue, Boston, Massachusetts 02115, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nature14187DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4497379PMC
March 2015

Epigenetic diversity in hematopoietic neoplasms.

Biochim Biophys Acta 2014 Dec 18;1846(2):477-84. Epub 2014 Sep 18.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Harvard School of Public Health, Boston, MA 02215, USA; Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.bbcan.2014.09.003DOI Listing
December 2014

Histone modifications are associated with transcript isoform diversity in normal and cancer cells.

PLoS Comput Biol 2014 Jun 5;10(6):e1003611. Epub 2014 Jun 5.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, and Department of Biostatistics, Harvard School of Public Health, Boston, Massachusetts, United States of America.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1371/journal.pcbi.1003611DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4046914PMC
June 2014

The ADP-ribosyltransferase PARP10/ARTD10 interacts with proliferating cell nuclear antigen (PCNA) and is required for DNA damage tolerance.

J Biol Chem 2014 May 2;289(19):13627-37. Epub 2014 Apr 2.

From the Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, Pennsylvania 17033.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1074/jbc.M114.556340DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4036367PMC
May 2014

Patterns of somatically acquired amplifications and deletions in apparently normal tissues of ovarian cancer patients.

Cell Rep 2014 May 1;7(4):1310-9. Epub 2014 May 1.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO 80045, USA; Molecular Oncology Program, University of Colorado Cancer Center, Aurora, CO 80045, USA; Department of Biostatistics and Informatics, Colorado School of Public Health, Aurora, CO 80045, USA. Electronic address:

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.celrep.2014.03.071DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4108616PMC
May 2014

MicroRNAs down-regulate homologous recombination in the G1 phase of cycling cells to maintain genomic stability.

Elife 2014 Apr 30;3:e02445. Epub 2014 Apr 30.

Department of Radiation Oncology, Division of Genomic Stability and DNA Repair, Dana-Farber Cancer Institute, Harvard Medical School, Boston, United States

View Article

Download full-text PDF

Source
http://dx.doi.org/10.7554/eLife.02445DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4031983PMC
April 2014

CruzDB: software for annotation of genomic intervals with UCSC genome-browser database.

Bioinformatics 2013 Dec 12;29(23):3003-6. Epub 2013 Sep 12.

Department of Medicine, University of Colorado Denver, School of Medicine, Denver, CO, USA and Molecular Oncology Program, University of Colorado Cancer Center, Aurora, CO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/bioinformatics/btt534DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3834799PMC
December 2013

Copy neutral loss of heterozygosity is more frequent in older ovarian cancer patients.

Genes Chromosomes Cancer 2013 Sep 28;52(9):794-801. Epub 2013 May 28.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/gcc.22075DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3767172PMC
September 2013

Loss of heterozygosity preferentially occurs in early replicating regions in cancer genomes.

Nucleic Acids Res 2013 Sep 22;41(16):7615-24. Epub 2013 Jun 22.

Department of Medicine, University of Colorado School of Medicine, Aurora, CO, USA and Molecular Oncology Program, University of Colorado Cancer Center, Aurora, CO, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkt552DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3763542PMC
September 2013

DNA replication timing and higher-order nuclear organization determine single-nucleotide substitution patterns in cancer genomes.

Nat Commun 2013 ;4:1502

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Instituteh, Boston, Massachusetts 02215, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ncomms2502DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3633418PMC
June 2013

Cellular crowding imposes global constraints on the chemistry and evolution of proteomes.

Proc Natl Acad Sci U S A 2012 Dec 26;109(50):20461-6. Epub 2012 Nov 26.

Medical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.1209312109DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3528536PMC
December 2012

Evolution of the cancer genome.

Trends Genet 2012 Apr 16;28(4):155-63. Epub 2012 Feb 16.

Department of Biostatistics and Computational Biology, Harvard School of Public Health, Boston, MA 02115, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.tig.2012.01.003DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3711268PMC
April 2012

DNA replication timing and long-range DNA interactions predict mutational landscapes of cancer genomes.

Nat Biotechnol 2011 Nov 20;29(12):1103-8. Epub 2011 Nov 20.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.

View Article

Download full-text PDF

Source
http://www.nature.com/articles/nbt.2030
Publisher Site
http://dx.doi.org/10.1038/nbt.2030DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3923360PMC
November 2011

DNA secondary structures and epigenetic determinants of cancer genome evolution.

Nat Struct Mol Biol 2011 Jul 3;18(8):950-5. Epub 2011 Jul 3.

Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/nsmb.2089DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3963273PMC
July 2011

Somatic mosaicism in healthy human tissues.

Authors:
Subhajyoti De

Trends Genet 2011 Jun 14;27(6):217-23. Epub 2011 Apr 14.

Department of Biostatistics and Computational Biology, Dana Farber Cancer Institute, and Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA.

View Article

Download full-text PDF

Source
https://linkinghub.elsevier.com/retrieve/pii/S01689525110004
Publisher Site
http://dx.doi.org/10.1016/j.tig.2011.03.002DOI Listing
June 2011

A time-invariant principle of genome evolution.

Proc Natl Acad Sci U S A 2010 Jul 6;107(29):13004-9. Epub 2010 Jul 6.

Medical Research Council Laboratory of Molecular Biology, Cambridge CB2 0QH, United Kingdom.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1073/pnas.0914454107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2919972PMC
July 2010

Genomic neighbourhood and the regulation of gene expression.

Curr Opin Cell Biol 2010 Jun 20;22(3):326-33. Epub 2010 May 20.

MRC Laboratory of Molecular Biology, Cambridge, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.ceb.2010.04.004DOI Listing
June 2010

Interfacing systems biology and synthetic biology.

Genome Biol 2009 26;10(6):309. Epub 2009 Jun 26.

Centre for Integrated Systems Biology of Ageing and Nutrition (CISBAN) and School of Computing Science, Newcastle University, Newcastle upon Tyne NE1 7RU, UK.

View Article

Download full-text PDF

Source
http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
Publisher Site
http://dx.doi.org/10.1186/gb-2009-10-6-309DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2718492PMC
September 2009

Journal club. A biologist looks at the effect of a dynamic nuclear environment on gene expression.

Authors:
Subhajyoti De

Nature 2009 Jul;460(7251):15

Medical Research Council, Cambridge, UK.

View Article

Download full-text PDF

Source
http://www.nature.com/articles/460015e
Publisher Site
http://dx.doi.org/10.1038/460015eDOI Listing
July 2009

The impact of genomic neighborhood on the evolution of human and chimpanzee transcriptome.

Genome Res 2009 May 19;19(5):785-94. Epub 2009 Feb 19.

MRC Laboratory of Molecular Biology, Cambridge, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1101/gr.086165.108DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2675967PMC
May 2009

BloodExpress: a database of gene expression in mouse haematopoiesis.

Nucleic Acids Res 2009 Jan 4;37(Database issue):D873-9. Epub 2008 Nov 4.

Department of Haematology, Cambridge Institute for Medical Research, University of Cambridge, Hills Road, Cambridge CB2 0XY, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1093/nar/gkn854DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686428PMC
January 2009

Patterns of evolutionary constraints on genes in humans.

BMC Evol Biol 2008 Oct 7;8:275. Epub 2008 Oct 7.

MRC Laboratory of Molecular Biology, Hills Road, Cambridge, CB2 2QH, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1186/1471-2148-8-275DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2587479PMC
October 2008

Common variants near MC4R are associated with fat mass, weight and risk of obesity.

Authors:
Ruth J F Loos Cecilia M Lindgren Shengxu Li Eleanor Wheeler Jing Hua Zhao Inga Prokopenko Michael Inouye Rachel M Freathy Antony P Attwood Jacques S Beckmann Sonja I Berndt Kevin B Jacobs Stephen J Chanock Richard B Hayes Sven Bergmann Amanda J Bennett Sheila A Bingham Murielle Bochud Morris Brown Stéphane Cauchi John M Connell Cyrus Cooper George Davey Smith Ian Day Christian Dina Subhajyoti De Emmanouil T Dermitzakis Alex S F Doney Katherine S Elliott Paul Elliott David M Evans I Sadaf Farooqi Philippe Froguel Jilur Ghori Christopher J Groves Rhian Gwilliam David Hadley Alistair S Hall Andrew T Hattersley Johannes Hebebrand Iris M Heid Claudia Lamina Christian Gieger Thomas Illig Thomas Meitinger H-Erich Wichmann Blanca Herrera Anke Hinney Sarah E Hunt Marjo-Riitta Jarvelin Toby Johnson Jennifer D M Jolley Fredrik Karpe Andrew Keniry Kay-Tee Khaw Robert N Luben Massimo Mangino Jonathan Marchini Wendy L McArdle Ralph McGinnis David Meyre Patricia B Munroe Andrew D Morris Andrew R Ness Matthew J Neville Alexandra C Nica Ken K Ong Stephen O'Rahilly Katharine R Owen Colin N A Palmer Konstantinos Papadakis Simon Potter Anneli Pouta Lu Qi Joshua C Randall Nigel W Rayner Susan M Ring Manjinder S Sandhu André Scherag Matthew A Sims Kijoung Song Nicole Soranzo Elizabeth K Speliotes Holly E Syddall Sarah A Teichmann Nicholas J Timpson Jonathan H Tobias Manuela Uda Carla I Ganz Vogel Chris Wallace Dawn M Waterworth Michael N Weedon Cristen J Willer Wraight Xin Yuan Eleftheria Zeggini Joel N Hirschhorn David P Strachan Willem H Ouwehand Mark J Caulfield Nilesh J Samani Timothy M Frayling Peter Vollenweider Gerard Waeber Vincent Mooser Panos Deloukas Mark I McCarthy Nicholas J Wareham Inês Barroso Kevin B Jacobs Stephen J Chanock Richard B Hayes Claudia Lamina Christian Gieger Thomas Illig Thomas Meitinger H-Erich Wichmann Peter Kraft Susan E Hankinson David J Hunter Frank B Hu Helen N Lyon Benjamin F Voight Martin Ridderstrale Leif Groop Paul Scheet Serena Sanna Goncalo R Abecasis Giuseppe Albai Ramaiah Nagaraja David Schlessinger Anne U Jackson Jaakko Tuomilehto Francis S Collins Michael Boehnke Karen L Mohlke

Nat Genet 2008 Jun 4;40(6):768-75. Epub 2008 May 4.

MRC Epidemiology Unit, Addenbrooke's Hospital, Cambridge CB2 0QQ, UK.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1038/ng.140DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2669167PMC
June 2008

Functional protein divergence in the evolution of Homo sapiens.

Genome Biol 2008 15;9(2):R33. Epub 2008 Feb 15.

Research Unit on Biomedical Informatics, Experimental and Health Science Department, Universitat Pompeu Fabra, Barcelona, 08003, Spain.

View Article

Download full-text PDF

Source
http://genomebiology.biomedcentral.com/articles/10.1186/gb-2
Publisher Site
http://dx.doi.org/10.1186/gb-2008-9-2-r33DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2374701PMC
May 2008

Dopamine mediates context-dependent modulation of sensory plasticity in C. elegans.

Neuron 2007 Aug;55(4):662-76

Biomedical Sciences Graduate Program, University of California, San Diego, La Jolla CA 92093, USA.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.neuron.2007.07.023DOI Listing
August 2007

Entamoeba histolytica: computational identification of putative microRNA candidates.

Exp Parasitol 2006 Aug 3;113(4):239-43. Epub 2006 Mar 3.

Department of Biotechnology, Indian Institute of Technology-Kharagpur, Kharagpur 721302, India.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.exppara.2006.01.009DOI Listing
August 2006

Characterization of the nonregular regions of proteins by a contortion index.

Biopolymers 2005 Oct;79(2):63-73

Department of Chemistry, Indian Institute of Technology, Kharagpur 721 302, India.

View Article

Download full-text PDF

Source
http://dx.doi.org/10.1002/bip.20333DOI Listing
October 2005

Interaction preferences across protein-protein interfaces of obligatory and non-obligatory components are different.

BMC Struct Biol 2005 Aug 16;5:15. Epub 2005 Aug 16.

Department of Biotechnology, Indian Institute of Technology, Kharagpur, 721 302, India.

View Article

Download full-text PDF

Source
http://bmcstructbiol.biomedcentral.com/articles/10.1186/1472
Publisher Site
http://dx.doi.org/10.1186/1472-6807-5-15DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1201154PMC
August 2005