Publications by authors named "Stuart Newfeld"

38Publications

Selective Disruption of Synaptic BMP Signaling by a Smad Mutation Adjacent to the Highly Conserved H2 Helix.

Genetics 2020 Sep 31;216(1):159-175. Epub 2020 Jul 31.

Section on Cellular Communication, Eunice Kennedy Shiver National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, Maryland 20892

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September 2020

TGF-β Prodomain Alignments Reveal Unexpected Cysteine Conservation Consistent with Phylogenetic Predictions of Cross-Subfamily Heterodimerization.

Genetics 2020 02 16;214(2):447-465. Epub 2019 Dec 16.

School of Life Sciences, Arizona State University, Tempe, Arizona 85287-4501

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February 2020

Transgenic Analyses in Drosophila Reveal That mCORL1 Is Functionally Distinct from mCORL2 and dCORL.

G3 (Bethesda) 2019 11 5;9(11):3781-3789. Epub 2019 Nov 5.

School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501 and

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November 2019

Expression and Function in Insulin Producing Neurons Reversibly Influences Adult Longevity in .

G3 (Bethesda) 2018 08 30;8(9):2979-2990. Epub 2018 Aug 30.

School of Life Sciences, Arizona State University, Tempe AZ 85287-4501

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August 2018

Expression in the Central Nervous System Is Regulated by Stage Specific Interactions of Intertwined Activators and Repressors.

G3 (Bethesda) 2018 07 2;8(7):2527-2536. Epub 2018 Jul 2.

School of Life Sciences, Arizona State University, Tempe AZ 85287-4501

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July 2018

Automated annotation of developmental stages of Drosophila embryos in images containing spatial patterns of expression.

Bioinformatics 2014 Jan 3;30(2):266-73. Epub 2013 Dec 3.

School of Computing, Informatics, and Decision Systems Engineering, Center for Evolutionary Medicine and Informatics, The Biodesign Institute, Arizona State University, Tempe, AZ 85287, USA, National Key Laboratory for Novel Software Technology, Nanjing University, Nanjing 210023, China, School of Life Sciences, Arizona State University, Tempe, AZ 85287, USA and Center of Excellence in Genomic Medicine Research, King Abdulaziz University, Jeddah, Saudi Arabia.

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January 2014

Image-level and group-level models for Drosophila gene expression pattern annotation.

BMC Bioinformatics 2013 Dec 3;14:350. Epub 2013 Dec 3.

Center for Evolutionary Medicine and Informatics, The Biodesign Institute, Arizona State University, Tempe, AZ, 85287, USA.

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December 2013

Meeting report - TGF-β superfamily: signaling in development and disease.

J Cell Sci 2013 Nov;126(Pt 21):4809-13

Laboratory of Cellular and Molecular Biology, Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, USA.

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November 2013

New insights into extracellular and post-translational regulation of TGF-β family signalling pathways.

J Biochem 2013 Jul 22;154(1):11-9. Epub 2013 May 22.

Institute of Biotechnology, University of Helsinki, Helsinki, Finland.

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July 2013

Hippo pathway phylogenetics predicts monoubiquitylation of Salvador and Merlin/Nf2.

PLoS One 2012 14;7(12):e51599. Epub 2012 Dec 14.

NextBio, Santa Clara, California, United States of America.

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June 2013

Regulation of TGF-β signal transduction by mono- and deubiquitylation of Smads.

FEBS Lett 2012 Jul 24;586(14):1913-20. Epub 2012 Mar 24.

Department of Biomedical Sciences, University of Padova, Padova, Italy.

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July 2012

Comparison of embryonic expression within multigene families using the FlyExpress discovery platform reveals more spatial than temporal divergence.

Dev Dyn 2012 Jan 29;241(1):150-60. Epub 2011 Sep 29.

School of Life Sciences and Center for Evolutionary Medicine and Informatics in the Biodesign Institute, Arizona State University, Tempe, Arizona 85287, USA.

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January 2012

Wg signaling via Zw3 and mad restricts self-renewal of sensory organ precursor cells in Drosophila.

Genetics 2011 Nov 25;189(3):809-24. Epub 2011 Aug 25.

School of Life Sciences, Arizona State University, Tempe, Arizona 85287-4501, USA.

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November 2011

The Sno oncogene antagonizes Wingless signaling during wing development in Drosophila.

PLoS One 2010 Jul 16;5(7):e11619. Epub 2010 Jul 16.

School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America.

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July 2010

Distinct molecular evolutionary mechanisms underlie the functional diversification of the Wnt and TGFbeta signaling pathways.

J Mol Evol 2010 Apr 26;70(4):303-12. Epub 2010 Mar 26.

School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.

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April 2010

Informatics approaches to understanding TGFbeta pathway regulation.

Development 2009 Nov;136(22):3729-40

EMBL, European Bioinformatics Institute, Hinxton, Saffron Waldon CB10 1SD, UK.

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November 2009

Current topics in organogenesis and gametogenesis.

Fly (Austin) 2008 May-Jun;2(3):125-8. Epub 2008 May 23.

Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

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December 2010

Salmonella pathogenesis reveals that BMP signaling regulates blood cell homeostasis and immune responses in Drosophila.

Proc Natl Acad Sci U S A 2008 Sep 24;105(39):14952-7. Epub 2008 Sep 24.

School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.

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September 2008

Lysine conservation and context in TGFbeta and Wnt signaling suggest new targets and general themes for posttranslational modification.

J Mol Evol 2008 Oct 17;67(4):323-33. Epub 2008 Sep 17.

School of Life Sciences, Arizona State University, Tempe, AZ 85287-4501, USA.

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October 2008

Evolution of genes and genomes on the Drosophila phylogeny.

Authors:
Andrew G Clark Michael B Eisen Douglas R Smith Casey M Bergman Brian Oliver Therese A Markow Thomas C Kaufman Manolis Kellis William Gelbart Venky N Iyer Daniel A Pollard Timothy B Sackton Amanda M Larracuente Nadia D Singh Jose P Abad Dawn N Abt Boris Adryan Montserrat Aguade Hiroshi Akashi Wyatt W Anderson Charles F Aquadro David H Ardell Roman Arguello Carlo G Artieri Daniel A Barbash Daniel Barker Paolo Barsanti Phil Batterham Serafim Batzoglou Dave Begun Arjun Bhutkar Enrico Blanco Stephanie A Bosak Robert K Bradley Adrianne D Brand Michael R Brent Angela N Brooks Randall H Brown Roger K Butlin Corrado Caggese Brian R Calvi A Bernardo de Carvalho Anat Caspi Sergio Castrezana Susan E Celniker Jean L Chang Charles Chapple Sourav Chatterji Asif Chinwalla Alberto Civetta Sandra W Clifton Josep M Comeron James C Costello Jerry A Coyne Jennifer Daub Robert G David Arthur L Delcher Kim Delehaunty Chuong B Do Heather Ebling Kevin Edwards Thomas Eickbush Jay D Evans Alan Filipski Sven Findeiss Eva Freyhult Lucinda Fulton Robert Fulton Ana C L Garcia Anastasia Gardiner David A Garfield Barry E Garvin Greg Gibson Don Gilbert Sante Gnerre Jennifer Godfrey Robert Good Valer Gotea Brenton Gravely Anthony J Greenberg Sam Griffiths-Jones Samuel Gross Roderic Guigo Erik A Gustafson Wilfried Haerty Matthew W Hahn Daniel L Halligan Aaron L Halpern Gillian M Halter Mira V Han Andreas Heger LaDeana Hillier Angie S Hinrichs Ian Holmes Roger A Hoskins Melissa J Hubisz Dan Hultmark Melanie A Huntley David B Jaffe Santosh Jagadeeshan William R Jeck Justin Johnson Corbin D Jones William C Jordan Gary H Karpen Eiko Kataoka Peter D Keightley Pouya Kheradpour Ewen F Kirkness Leonardo B Koerich Karsten Kristiansen Dave Kudrna Rob J Kulathinal Sudhir Kumar Roberta Kwok Eric Lander Charles H Langley Richard Lapoint Brian P Lazzaro So-Jeong Lee Lisa Levesque Ruiqiang Li Chiao-Feng Lin Michael F Lin Kerstin Lindblad-Toh Ana Llopart Manyuan Long Lloyd Low Elena Lozovsky Jian Lu Meizhong Luo Carlos A Machado Wojciech Makalowski Mar Marzo Muneo Matsuda Luciano Matzkin Bryant McAllister Carolyn S McBride Brendan McKernan Kevin McKernan Maria Mendez-Lago Patrick Minx Michael U Mollenhauer Kristi Montooth Stephen M Mount Xu Mu Eugene Myers Barbara Negre Stuart Newfeld Rasmus Nielsen Mohamed A F Noor Patrick O'Grady Lior Pachter Montserrat Papaceit Matthew J Parisi Michael Parisi Leopold Parts Jakob S Pedersen Graziano Pesole Adam M Phillippy Chris P Ponting Mihai Pop Damiano Porcelli Jeffrey R Powell Sonja Prohaska Kim Pruitt Marta Puig Hadi Quesneville Kristipati Ravi Ram David Rand Matthew D Rasmussen Laura K Reed Robert Reenan Amy Reily Karin A Remington Tania T Rieger Michael G Ritchie Charles Robin Yu-Hui Rogers Claudia Rohde Julio Rozas Marc J Rubenfield Alfredo Ruiz Susan Russo Steven L Salzberg Alejandro Sanchez-Gracia David J Saranga Hajime Sato Stephen W Schaeffer Michael C Schatz Todd Schlenke Russell Schwartz Carmen Segarra Rama S Singh Laura Sirot Marina Sirota Nicholas B Sisneros Chris D Smith Temple F Smith John Spieth Deborah E Stage Alexander Stark Wolfgang Stephan Robert L Strausberg Sebastian Strempel David Sturgill Granger Sutton Granger G Sutton Wei Tao Sarah Teichmann Yoshiko N Tobari Yoshihiko Tomimura Jason M Tsolas Vera L S Valente Eli Venter J Craig Venter Saverio Vicario Filipe G Vieira Albert J Vilella Alfredo Villasante Brian Walenz Jun Wang Marvin Wasserman Thomas Watts Derek Wilson Richard K Wilson Rod A Wing Mariana F Wolfner Alex Wong Gane Ka-Shu Wong Chung-I Wu Gabriel Wu Daisuke Yamamoto Hsiao-Pei Yang Shiaw-Pyng Yang James A Yorke Kiyohito Yoshida Evgeny Zdobnov Peili Zhang Yu Zhang Aleksey V Zimin Jennifer Baldwin Amr Abdouelleil Jamal Abdulkadir Adal Abebe Brikti Abera Justin Abreu St Christophe Acer Lynne Aftuck Allen Alexander Peter An Erica Anderson Scott Anderson Harindra Arachi Marc Azer Pasang Bachantsang Andrew Barry Tashi Bayul Aaron Berlin Daniel Bessette Toby Bloom Jason Blye Leonid Boguslavskiy Claude Bonnet Boris Boukhgalter Imane Bourzgui Adam Brown Patrick Cahill Sheridon Channer Yama Cheshatsang Lisa Chuda Mieke Citroen Alville Collymore Patrick Cooke Maura Costello Katie D'Aco Riza Daza Georgius De Haan Stuart DeGray Christina DeMaso Norbu Dhargay Kimberly Dooley Erin Dooley Missole Doricent Passang Dorje Kunsang Dorjee Alan Dupes Richard Elong Jill Falk Abderrahim Farina Susan Faro Diallo Ferguson Sheila Fisher Chelsea D Foley Alicia Franke Dennis Friedrich Loryn Gadbois Gary Gearin Christina R Gearin Georgia Giannoukos Tina Goode Joseph Graham Edward Grandbois Sharleen Grewal Kunsang Gyaltsen Nabil Hafez Birhane Hagos Jennifer Hall Charlotte Henson Andrew Hollinger Tracey Honan Monika D Huard Leanne Hughes Brian Hurhula M Erii Husby Asha Kamat Ben Kanga Seva Kashin Dmitry Khazanovich Peter Kisner Krista Lance Marcia Lara William Lee Niall Lennon Frances Letendre Rosie LeVine Alex Lipovsky Xiaohong Liu Jinlei Liu Shangtao Liu Tashi Lokyitsang Yeshi Lokyitsang Rakela Lubonja Annie Lui Pen MacDonald Vasilia Magnisalis Kebede Maru Charles Matthews William McCusker Susan McDonough Teena Mehta James Meldrim Louis Meneus Oana Mihai Atanas Mihalev Tanya Mihova Rachel Mittelman Valentine Mlenga Anna Montmayeur Leonidas Mulrain Adam Navidi Jerome Naylor Tamrat Negash Thu Nguyen Nga Nguyen Robert Nicol Choe Norbu Nyima Norbu Nathaniel Novod Barry O'Neill Sahal Osman Eva Markiewicz Otero L Oyono Christopher Patti Pema Phunkhang Fritz Pierre Margaret Priest Sujaa Raghuraman Filip Rege Rebecca Reyes Cecil Rise Peter Rogov Keenan Ross Elizabeth Ryan Sampath Settipalli Terry Shea Ngawang Sherpa Lu Shi Diana Shih Todd Sparrow Jessica Spaulding John Stalker Nicole Stange-Thomann Sharon Stavropoulos Catherine Stone Christopher Strader Senait Tesfaye Talene Thomson Yama Thoulutsang Dawa Thoulutsang Kerri Topham Ira Topping Tsamla Tsamla Helen Vassiliev Andy Vo Tsering Wangchuk Tsering Wangdi Michael Weiand Jane Wilkinson Adam Wilson Shailendra Yadav Geneva Young Qing Yu Lisa Zembek Danni Zhong Andrew Zimmer Zac Zwirko David B Jaffe Pablo Alvarez Will Brockman Jonathan Butler CheeWhye Chin Sante Gnerre Manfred Grabherr Michael Kleber Evan Mauceli Iain MacCallum

Nature 2007 Nov;450(7167):203-18

Department of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.

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November 2007

Defective decapentaplegic signaling results in heart overgrowth and reduced cardiac output in Drosophila.

Genetics 2007 Jul 16;176(3):1609-24. Epub 2007 May 16.

School of Life Sciences, Arizona State University, Tempe, Arizona 85287-4501, USA.

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July 2007

Drosophila TGIF proteins are transcriptional activators.

Mol Cell Biol 2003 Dec;23(24):9262-74

Department of Biochemistry and Molecular Genetics, and Center for Cell Signaling, University of Virginia, Charlottesville, VA 22908, USA.

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December 2003

The TGF-beta family: signaling pathways, developmental roles, and tumor suppressor activities.

ScientificWorldJournal 2002 Apr 5;2:892-925. Epub 2002 Apr 5.

Department of Biology, Arizona State University, Tempe, AZ 85287-1501, USA.

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April 2002