Steven J Mack

Steven J Mack

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Steven J Mack

Steven J Mack

Publications by authors named "Steven J Mack"

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Tools for building, analyzing and evaluating HLA haplotypes from families.

Hum Immunol 2019 Sep 5;80(9):633-643. Epub 2019 Feb 5.

Histocompatibility, Immunogenetics & Disease Profiling Laboratory, Stanford Blood Center, Palo Alto, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1016/j.humimm.2019.01.010DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6682467PMC
September 2019

HLA alleles and haplotypes observed in 263 US families.

Hum Immunol 2019 Sep 27;80(9):644-660. Epub 2019 Jun 27.

Histocompatibility, Immunogenetics & Disease Profiling Laboratory, Stanford Blood Center, Palo Alto, CA, USA; Department of Pathology, Stanford University School of Medicine, Palo Alto, CA, USA.

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http://dx.doi.org/10.1016/j.humimm.2019.05.018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6773484PMC
September 2019

Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop.

Hum Immunol 2019 Apr 6;80(4):228-236. Epub 2019 Feb 6.

Histocompatibility, Immunogenetics, and Disease Profiling Laboratory, Stanford Blood Center, Palo Alto, CA, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

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http://dx.doi.org/10.1016/j.humimm.2019.01.009DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6446570PMC
April 2019

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 496 adults from San Diego, California, USA.

Hum Immunol 2018 Dec 29;79(12):821-822. Epub 2018 Sep 29.

Division of Vaccine Discovery, La Jolla Institute for Allergy & Immunology, La Jolla, CA 92037, USA; Department of Medicine, University of California San Diego, La Jolla, CA 92093, USA.

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https://linkinghub.elsevier.com/retrieve/pii/S01988859183077
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http://dx.doi.org/10.1016/j.humimm.2018.09.008DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6537871PMC
December 2018

Collection and storage of HLA NGS genotyping data for the 17th International HLA and Immunogenetics Workshop.

Hum Immunol 2018 Feb 14;79(2):77-86. Epub 2017 Dec 14.

Center for Genetics, Children's Hospital Oakland Research Institute, Oakland, CA, USA. Electronic address:

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http://dx.doi.org/10.1016/j.humimm.2017.12.004DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5805642PMC
February 2018

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 339 adults from Managua, Nicaragua.

Hum Immunol 2018 Jan 7;79(1):1-2. Epub 2017 Nov 7.

Division of Vaccine Discovery, La Jolla Institute for Allergy & Immunology (LJI), La Jolla, CA 92037, USA; Department of Medicine, University of California San Diego, La Jolla, CA 92093, USA.

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http://dx.doi.org/10.1016/j.humimm.2017.11.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5788571PMC
January 2018

Sequence-based HLA-A, B, C, DP, DQ, and DR typing of 100 Luo infants from the Boro area of Nyanza Province, Kenya.

Hum Immunol 2017 Apr 16;78(4):325-326. Epub 2017 Mar 16.

Division of Infectious Diseases and Immunology, New York University School of Medicine, New York, NY 10016, USA; TBRU-ASTRa, USA. Electronic address:

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http://dx.doi.org/10.1016/j.humimm.2017.03.007DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5519768PMC
April 2017

Update on short population reports.

Hum Immunol 2016 Aug;77(8):617

Royal Liverpool University Hospital, Liverpool, United Kingdom. Electronic address:

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http://dx.doi.org/10.1016/j.humimm.2016.06.019DOI Listing
August 2016

Bridging ImmunoGenomic Data Analysis Workflow Gaps (BIGDAWG): An integrated case-control analysis pipeline.

Hum Immunol 2016 Mar 18;77(3):283-287. Epub 2015 Dec 18.

Center for Genetics, Children's Hospital & Research Center Oakland, Oakland, CA.

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http://dx.doi.org/10.1016/j.humimm.2015.12.006DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4828284PMC
March 2016

A gene feature enumeration approach for describing HLA allele polymorphism.

Authors:
Steven J Mack

Hum Immunol 2015 Dec 28;76(12):975-81. Epub 2015 Sep 28.

Children's Hospital Oakland Research Institute, 5700 Martin Luther King Jr. Way, Oakland, CA 94609, USA. Electronic address:

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http://dx.doi.org/10.1016/j.humimm.2015.09.016DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4674356PMC
December 2015

Human immunology in the era of big data.

Authors:
Steven J Mack

Hum Immunol 2014 Jan 11;75(1):2-3. Epub 2013 Dec 11.

Children's Hospital Oakland Research Institute, 5700 Martin Luther King Junior Way, Oakland, CA 94609-1673, United States. Electronic address:

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http://dx.doi.org/10.1016/j.humimm.2013.12.002DOI Listing
January 2014

A sequence-based approach demonstrates that balancing selection in classical human leukocyte antigen (HLA) loci is asymmetric.

Hum Mol Genet 2013 Jan 12;22(2):252-61. Epub 2012 Oct 12.

Department of Integrative Biology, University of California, Berkeley, CA 94720-3140, USA.

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http://dx.doi.org/10.1093/hmg/dds424DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3526157PMC
January 2013

Standard methods for the management of immunogenetic data.

Methods Mol Biol 2012 ;882:197-213

Department of Neurology, University of California, San Francisco, CA, USA.

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http://dx.doi.org/10.1007/978-1-61779-842-9_12DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209945PMC
October 2012

Analytical methods for immunogenetic population data.

Methods Mol Biol 2012 ;882:215-44

Center for Genetics, Children's Hospital and Research Center Oakland, Oakland, CA, USA.

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http://dx.doi.org/10.1007/978-1-61779-842-9_13DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209087PMC
October 2012

Analytical methods for disease association studies with immunogenetic data.

Methods Mol Biol 2012 ;882:245-66

Center for Genetics, Children's Hospital and Research Center Oakland, Oakland, CA, USA.

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http://dx.doi.org/10.1007/978-1-61779-842-9_14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209949PMC
October 2012

The CWD allele catalog in China.

Hum Immunol 2012 Jan 30;73(1):60. Epub 2011 Aug 30.

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http://dx.doi.org/10.1016/j.humimm.2011.08.010DOI Listing
January 2012

Immunogenetics as a tool in anthropological studies.

Immunology 2011 Jun 11;133(2):143-64. Epub 2011 Apr 11.

Department of Genetics and Evolution, Anthropology unit, Laboratory of Anthropology, Genetics and peopling history, University of Geneva, 12 rue Gustave-Revilliod, Geneva, Switzerland.

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http://gnv1.unige.ch/system/documents/34/original/j.1365-256
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http://doi.wiley.com/10.1111/j.1365-2567.2011.03438.x
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http://dx.doi.org/10.1111/j.1365-2567.2011.03438.xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3088978PMC
June 2011

Genetic origin of the Swedish Sami inferred from HLA class I and class II allele frequencies.

Eur J Hum Genet 2008 Nov 14;16(11):1341-9. Epub 2008 May 14.

Department of Genetics and Pathology, Rudbeck Laboratory, Uppsala University, Uppsala, Sweden.

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http://www.nature.com/articles/ejhg200888
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http://dx.doi.org/10.1038/ejhg.2008.88DOI Listing
November 2008

Signatures of demographic history and natural selection in the human major histocompatibility complex Loci.

Genetics 2006 Aug 15;173(4):2121-42. Epub 2006 May 15.

Departmento de Genética e Evolução, Universidade de São Paulo, Brazil, and Children's Hospital Oakland Research Institute, Oakland, CA 94609, USA.

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http://dx.doi.org/10.1534/genetics.105.052837DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1569707PMC
August 2006

Effect of brushing on fluoride release from 3 bracket adhesives.

Am J Orthod Dentofacial Orthop 2004 Sep;126(3):331-6

Department of Orthodontics, University of Iowa, Iowa City 52242, USA.

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http://dx.doi.org/10.1016/j.ajodo.2003.06.009DOI Listing
September 2004

Association of HLA class I and II alleles and extended haplotypes with nasopharyngeal carcinoma in Taiwan.

J Natl Cancer Inst 2002 Dec;94(23):1780-9

Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, 6120 Executive Boulevard, Rm. 7062, Rockville, MD 20852, USA.

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http://dx.doi.org/10.1093/jnci/94.23.1780DOI Listing
December 2002