Steven D Goodman

Steven D Goodman

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Steven D Goodman

Steven D Goodman

Publications by authors named "Steven D Goodman"

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Identification of essential biofilm proteins in middle ear fluids of otitis media with effusion patients.

Laryngoscope 2020 Mar 25;130(3):806-811. Epub 2019 Apr 25.

Center for Microbial Pathogenesis, Nationwide Children's Hospital, Columbus, Ohio, U.S.A.

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http://dx.doi.org/10.1002/lary.28011DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6814449PMC
March 2020

Proofreading of single nucleotide insertion/deletion replication errors analyzed by MALDI-TOF mass spectrometry assay.

DNA Repair (Amst) 2020 Jan 30;88:102810. Epub 2020 Jan 30.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 10002, Taiwan, ROC; Department of Laboratory Medicine, National Taiwan University Hospital, 10063, Taipei, Taiwan, ROC. Electronic address:

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http://dx.doi.org/10.1016/j.dnarep.2020.102810DOI Listing
January 2020

The extracellular DNA lattice of bacterial biofilms is structurally related to Holliday junction recombination intermediates.

Proc Natl Acad Sci U S A 2019 Dec 25;116(50):25068-25077. Epub 2019 Nov 25.

Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, OH 43205;

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http://dx.doi.org/10.1073/pnas.1909017116DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6911203PMC
December 2019

Antibodies against the DNABII protein integration host factor (IHF) inhibit sinus implant biofilms.

Laryngoscope 2019 Jul 17. Epub 2019 Jul 17.

Center for Microbial Pathogenesis, Abigail Wexner Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A.

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http://dx.doi.org/10.1002/lary.28188DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6980231PMC
July 2019

Development of a Standardized Scoring System to Assess a Murine Model of Clostridium difficile Colitis.

J Invest Surg 2019 Mar 20:1-9. Epub 2019 Mar 20.

a Center for Perinatal Research, The Research Institute at Nationwide Children's Hospital, Department of Pediatric Surgery , Nationwide Children's Hospital , Columbus , OH , USA.

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http://dx.doi.org/10.1080/08941939.2019.1571129DOI Listing
March 2019

An enhanced Lactobacillus reuteri biofilm formulation that increases protection against experimental necrotizing enterocolitis.

Am J Physiol Gastrointest Liver Physiol 2018 09 31;315(3):G408-G419. Epub 2018 May 31.

Center for Perinatal Research, The Research Institute at Nationwide Children's Hospital, Department of Pediatric Surgery, Nationwide Children's Hospital , Columbus, Ohio.

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http://dx.doi.org/10.1152/ajpgi.00078.2018DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6415713PMC
September 2018

The DNABII family of proteins is comprised of the only nucleoid associated proteins required for nontypeable Haemophilus influenzae biofilm structure.

Microbiologyopen 2018 06 12;7(3):e00563. Epub 2017 Dec 12.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital and The Ohio State University College of Medicine, Columbus, OH, USA.

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http://dx.doi.org/10.1002/mbo3.563DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6011942PMC
June 2018

Targeting the HUβ Protein Prevents Porphyromonas gingivalis from Entering into Preexisting Biofilms.

J Bacteriol 2018 06 9;200(11). Epub 2018 May 9.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, Columbus, Ohio, USA

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http://dx.doi.org/10.1128/JB.00790-17DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5952391PMC
June 2018

Proofreading and DNA Repair Assay Using Single Nucleotide Extension and MALDI-TOF Mass Spectrometry Analysis.

J Vis Exp 2018 06 19(136). Epub 2018 Jun 19.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University; Department of Laboratory Medicine, National Taiwan University Hospital;

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http://dx.doi.org/10.3791/57862DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6101880PMC
June 2018

DNA polymerase I proofreading exonuclease activity is required for endonuclease V repair pathway both in vitro and in vivo.

DNA Repair (Amst) 2018 04 17;64:59-67. Epub 2018 Feb 17.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100-02, Taiwan, ROC; Department of Laboratory Medicine, National Taiwan University Hospital, Taipei, 100-02, Taiwan, ROC. Electronic address:

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http://dx.doi.org/10.1016/j.dnarep.2018.02.005DOI Listing
April 2018

Application of single nucleotide extension and MALDI-TOF mass spectrometry in proofreading and DNA repair assay.

DNA Repair (Amst) 2018 01 2;61:63-75. Epub 2017 Dec 2.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei 10002, Taiwan, ROC; Department of Laboratory Medicine, National Taiwan University Hospital, Taipei, 100-63, Taiwan, ROC. Electronic address:

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http://dx.doi.org/10.1016/j.dnarep.2017.11.011DOI Listing
January 2018

Nontypeable releases DNA and DNABII proteins via a T4SS-like complex and ComE of the type IV pilus machinery.

Proc Natl Acad Sci U S A 2017 08 10;114(32):E6632-E6641. Epub 2017 Jul 10.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, Columbus, OH 43205;

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http://dx.doi.org/10.1073/pnas.1705508114DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5559034PMC
August 2017

Transcutaneous Immunization with a Band-Aid Prevents Experimental Otitis Media in a Polymicrobial Model.

Clin Vaccine Immunol 2017 Jun 5;24(6). Epub 2017 Jun 5.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's and The Ohio State University College of Medicine, Columbus, Ohio, USA

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http://dx.doi.org/10.1128/CVI.00563-16DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5461379PMC
June 2017

Enhanced Probiotic Potential of When Delivered as a Biofilm on Dextranomer Microspheres That Contain Beneficial Cargo.

Front Microbiol 2017 27;8:489. Epub 2017 Mar 27.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital Columbus, OH, USA.

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http://dx.doi.org/10.3389/fmicb.2017.00489DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5366311PMC
March 2017

Monoclonal antibodies against DNA-binding tips of DNABII proteins disrupt biofilms in vitro and induce bacterial clearance in vivo.

EBioMedicine 2016 Aug 16;10:33-44. Epub 2016 Jun 16.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, 700 Children's Drive, Columbus, OH, 43205, USA; The Ohio State University College of Medicine, Department of Pediatrics, 700 Children's Drive, Columbus, OH, 43205, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ebiom.2016.06.022DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5006588PMC
August 2016

Identification of biofilms in post-tympanostomy tube otorrhea.

Laryngoscope 2016 08 4;126(8):1946-51. Epub 2016 Jan 4.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital.

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http://dx.doi.org/10.1002/lary.25826DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4955598PMC
August 2016

Harvesting the benefits of biofilms: A novel probiotic delivery system for the prevention of necrotizing enterocolitis.

J Pediatr Surg 2016 Jun 2;51(6):936-41. Epub 2016 Mar 2.

Center for Perinatal Research, The Research Institute at Nationwide Children's Hospital, Department of Pediatric Surgery, Nationwide Children's Hospital, Columbus, OH. Electronic address:

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http://dx.doi.org/10.1016/j.jpedsurg.2016.02.062DOI Listing
June 2016

A biochemical characterization of the DNA binding activity of the response regulator VicR from Streptococcus mutans.

PLoS One 2014 17;9(9):e108027. Epub 2014 Sep 17.

Department of Molecular and Computational Biology, Division of Biomedical Science, Herman Ostrow School of Dentistry, The University of Southern California, Los Angeles, California, United States of America; Center for Microbial Pathogenesis, The Research Institute, Nationwide Children's Hospital, Columbus, Ohio, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0108027PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4168254PMC
December 2015

Deoxyinosine repair in nuclear extracts of human cells.

Cell Biosci 2015 8;5:52. Epub 2015 Sep 8.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, #7, Chung-Shan South Road, Taipei, 10002 Taiwan ROC ; Department of Laboratory Medicine, National Taiwan University Hospital, Taipei, 10002 Taiwan ROC.

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http://dx.doi.org/10.1186/s13578-015-0044-8DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4563847PMC
September 2015

A biochemical analysis of the interaction of Porphyromonas gingivalis HU PG0121 protein with DNA.

PLoS One 2014 28;9(3):e93266. Epub 2014 Mar 28.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, Columbus, Ohio, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0093266PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3969353PMC
June 2015

DNABII proteins play a central role in UPEC biofilm structure.

Mol Microbiol 2015 Jun 16;96(6):1119-35. Epub 2015 Apr 16.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, The Ohio State University College of Medicine, Columbus, OH, 43205, USA.

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http://dx.doi.org/10.1111/mmi.12994DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4464964PMC
June 2015

Antibodies against the majority subunit of type IV Pili disperse nontypeable Haemophilus influenzae biofilms in a LuxS-dependent manner and confer therapeutic resolution of experimental otitis media.

Mol Microbiol 2015 Apr 15;96(2):276-92. Epub 2015 Feb 15.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, 700 Children's Drive, Columbus, OH, 43205, USA; The Ohio State University College of Medicine, Columbus, OH, 43210, USA.

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http://dx.doi.org/10.1111/mmi.12934DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4423401PMC
April 2015

Evaluation of the kinetics and mechanism of action of anti-integration host factor-mediated disruption of bacterial biofilms.

Mol Microbiol 2014 Sep 19;93(6):1246-58. Epub 2014 Aug 19.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, 700 Children's Drive, Columbus, OH, 43205, USA; Department of Pediatrics, The Ohio State University College of Medicine, Columbus, OH, 43210, USA.

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http://dx.doi.org/10.1111/mmi.12735DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4160410PMC
September 2014

Chaperoning HMGA2 protein protects stalled replication forks in stem and cancer cells.

Cell Rep 2014 Feb 6;6(4):684-97. Epub 2014 Feb 6.

School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore. Electronic address:

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http://dx.doi.org/10.1016/j.celrep.2014.01.014DOI Listing
February 2014

Structural stability of Burkholderia cenocepacia biofilms is reliant on eDNA structure and presence of a bacterial nucleic acid binding protein.

PLoS One 2013 14;8(6):e67629. Epub 2013 Jun 14.

Center for Microbial Pathogenesis, The Research Institute at Nationwide Children's Hospital, and The Ohio State University College of Medicine, Columbus, Ohio, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0067629PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3682984PMC
January 2014

Antibodies directed against integration host factor mediate biofilm clearance from Nasopore.

Laryngoscope 2013 Nov 13;123(11):2626-32. Epub 2013 May 13.

Department of Otolaryngology-Head and Neck Surgery, The Ohio State University, The Research Institute at Nationwide Children's Hospital, Columbus, Ohio, U.S.A.

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http://dx.doi.org/10.1002/lary.24183DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4060527PMC
November 2013

The excision of 3' penultimate errors by DNA polymerase I and its role in endonuclease V-mediated DNA repair.

DNA Repair (Amst) 2013 Nov 5;12(11):899-911. Epub 2013 Sep 5.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100-02, Taiwan, ROC.

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http://dx.doi.org/10.1016/j.dnarep.2013.08.003DOI Listing
November 2013

The nucleoid-associated protein HUβ affects global gene expression in Porphyromonas gingivalis.

Microbiology 2013 Feb 22;159(Pt 2):219-229. Epub 2012 Nov 22.

Department of Oral Medicine Infection and Immunity, Harvard School of Dental Medicine, Boston, MA, USA.

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https://www.microbiologyresearch.org/content/journal/micro/1
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http://dx.doi.org/10.1099/mic.0.061002-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3709559PMC
February 2013

Oligomerization of the response regulator ComE from Streptococcus mutans is affected by phosphorylation.

J Bacteriol 2012 Mar 30;194(5):1127-35. Epub 2011 Dec 30.

Division of Biomedical Science, Herman Ostrow School of Dentistry of University of Southern California, Los Angeles, California, USA.

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http://dx.doi.org/10.1128/JB.06565-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3294772PMC
March 2012

Characterization of DNA binding sites of the ComE response regulator from Streptococcus mutans.

J Bacteriol 2011 Jul 20;193(14):3642-52. Epub 2011 May 20.

Department of Molecular and Computational Biology, Division of Biomedical Science, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, California 90089-0641, USA.

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http://dx.doi.org/10.1128/JB.00155-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3133340PMC
July 2011

Development of an animal model for Aggregatibacter actinomycetemcomitans biofilm-mediated oral osteolytic infection: a preliminary study.

J Periodontol 2011 May 11;82(5):778-89. Epub 2011 Jan 11.

Division of Periodontology, Diagnostic Sciences and Dental Hygiene, Herman Ostrow School of Dentistry, University of Southern California, Los Angeles, CA 90089, USA.

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http://dx.doi.org/10.1902/jop.2010.100263DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3496747PMC
May 2011

Endonuclease V-mediated deoxyinosine excision repair in vitro.

DNA Repair (Amst) 2010 Oct 8;9(10):1073-9. Epub 2010 Aug 8.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei 100-63, Taiwan, ROC.

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http://dx.doi.org/10.1016/j.dnarep.2010.07.007DOI Listing
October 2010

Regulation of ciaXRH operon expression and identification of the CiaR regulon in Streptococcus mutans.

J Bacteriol 2010 Sep 16;192(18):4669-79. Epub 2010 Jul 16.

College of Dentistry, The University of Oklahoma Health Sciences Center, Oklahoma City, Oklahoma 73104, USA.

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http://jb.asm.org/cgi/doi/10.1128/JB.00556-10
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http://dx.doi.org/10.1128/JB.00556-10DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2937423PMC
September 2010

HMGA2 exhibits dRP/AP site cleavage activity and protects cancer cells from DNA-damage-induced cytotoxicity during chemotherapy.

Nucleic Acids Res 2009 Jul 21;37(13):4371-84. Epub 2009 May 21.

Division of Genomics and Genetics, School of Biological Sciences, Nanyang Technological University, Singapore.

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http://dx.doi.org/10.1093/nar/gkp375DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2715238PMC
July 2009

Reciprocal expression of integration host factor and HU in the developmental cycle and infectivity of Legionella pneumophila.

Appl Environ Microbiol 2009 Apr 5;75(7):1826-37. Epub 2009 Feb 5.

Department of Microbiology and Immunology, Faculty of Medicine, Dalhousie University, Halifax, Nova Scotia, Canada B3H 4H7.

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http://aem.asm.org/cgi/doi/10.1128/AEM.02756-08
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http://dx.doi.org/10.1128/AEM.02756-08DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2663186PMC
April 2009

Escherichia coli HU protein has a role in the repair of abasic sites in DNA.

Nucleic Acids Res 2007 4;35(19):6672-80. Epub 2007 Oct 4.

Department of Radiation Oncology, Emory University School of Medicine, Clifton Road NE, Atlanta, GA 30322, USA.

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http://dx.doi.org/10.1093/nar/gkm567DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2095813PMC
December 2007

Nick-directed repair of palindromic loop mismatches in human cell extracts.

J Biomed Sci 2005 10;12(4):659-69. Epub 2005 Nov 10.

Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, 7, Chung-Shan South Road, 100-63, Taipei, Taiwan, ROC.

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http://www.springerlink.com/index/10.1007/s11373-005-7891-y
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http://dx.doi.org/10.1007/s11373-005-7891-yDOI Listing
January 2006

Peptide pheromone induced cell death of Streptococcus mutans.

FEMS Microbiol Lett 2005 Oct;251(2):321-6

Division of Oral Biology and Medicine, UCLA School of Dentistry, Los Angeles, CA 90095, United States.

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http://dx.doi.org/10.1016/j.femsle.2005.08.018DOI Listing
October 2005

A protein-driven DNA device that measures the excess binding energy of proteins that distort DNA.

Angew Chem Int Ed Engl 2004 Sep;43(36):4750-2

Department of Chemistry, New York University, New York, NY 10003, USA.

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http://doi.wiley.com/10.1002/anie.200460302
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http://dx.doi.org/10.1002/anie.200460302DOI Listing
September 2004

Interaction of nick-directed DNA mismatch repair and loop repair in human cells.

J Biol Chem 2004 Jul 18;279(29):30228-35. Epub 2004 May 18.

School of Medical Technology, National Taiwan University, Taipei, Republic of China.

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http://dx.doi.org/10.1074/jbc.M401675200DOI Listing
July 2004

Mutation of luxS affects biofilm formation in Streptococcus mutans.

Infect Immun 2003 Apr;71(4):1972-9

UCLA Molecular Biology Institute and School of Dentistry, 10833 Le Conte Avenue, Los Angeles, CA 90095-1668, USA.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC152054PMC
http://dx.doi.org/10.1128/iai.71.4.1972-1979.2003DOI Listing
April 2003