Stephen S Moore

Stephen S Moore

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Stephen S Moore

Publications by authors named "Stephen S Moore"

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Polymorphisms and genes associated with puberty in heifers.

Theriogenology 2016 Jul 22;86(1):333-9. Epub 2016 Apr 22.

Department of Animal Sciences, Colorado State University, Fort Collins, Colorado, USA.

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http://dx.doi.org/10.1016/j.theriogenology.2016.04.046DOI Listing
July 2016

Genome-wide association for milk production and female fertility traits in Canadian dairy Holstein cattle.

BMC Genet 2016 06 10;17(1):75. Epub 2016 Jun 10.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, T6G 2P5, Canada.

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http://dx.doi.org/10.1186/s12863-016-0386-1DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4901445PMC
June 2016

Non-synonymous mutations mapped to chromosome X associated with andrological and growth traits in beef cattle.

BMC Genomics 2015 May 15;16:384. Epub 2015 May 15.

Queensland Alliance for Agriculture and Food Innovation, Centre for Animal Science, The University of Queensland, Brisbane, QLD, 4067, Australia.

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http://www.biomedcentral.com/1471-2164/16/384
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http://dx.doi.org/10.1186/s12864-015-1595-0DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4432507PMC
May 2015

Genomic regions associated with fertility traits in male and female cattle: advances from microsatellites to high-density chips and beyond.

Anim Reprod Sci 2013 Sep 17;141(1-2):1-19. Epub 2013 Jul 17.

The University of Queensland, Centre for Animal Science, Queensland Alliance for Agriculture and Food Innovation, Gatton, QLD 4343, Australia.

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http://dx.doi.org/10.1016/j.anireprosci.2013.07.002DOI Listing
September 2013

Whole-genome resequencing of Hanwoo (Korean cattle) and insight into regions of homozygosity.

BMC Genomics 2013 Jul 30;14:519. Epub 2013 Jul 30.

Animal Genomics and Bioinformatics Division, National Institute of Animal Science, Rural Development Administration, Suwon 441-706, Republic of Korea.

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http://dx.doi.org/10.1186/1471-2164-14-519DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3750754PMC
July 2013

Genome-wide copy number variation in Hanwoo, Black Angus, and Holstein cattle.

Mamm Genome 2013 Apr 30;24(3-4):151-63. Epub 2013 Mar 30.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.

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http://dx.doi.org/10.1007/s00335-013-9449-zDOI Listing
April 2013

Estimating animal abundance in ground beef batches assayed with molecular markers.

PLoS One 2012 30;7(3):e34191. Epub 2012 Mar 30.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0034191PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3316629PMC
November 2012

Functional genomics approach for identification of molecular processes underlying neurodegenerative disorders in prion diseases.

Curr Genomics 2012 Aug;13(5):369-78

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada T6G 2P5.

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http://dx.doi.org/10.2174/138920212801619223DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3401894PMC
August 2012

Gene expression alterations in Rocky Mountain elk infected with chronic wasting disease.

Prion 2012 Jul 1;6(3):282-301. Epub 2012 Jul 1.

Department of Agricultural, Food & Nutritional Science, University of Alberta, Edmonton, AB, Canada.

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http://dx.doi.org/10.4161/pri.19915DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3399530PMC
July 2012

Genome-wide analysis of zygotic linkage disequilibrium and its components in crossbred cattle.

BMC Genet 2012 Jul 24;13:65. Epub 2012 Jul 24.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G 2P5, Canada.

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http://dx.doi.org/10.1186/1471-2156-13-65DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3443453PMC
July 2012

Short reads, circular genome: skimming solid sequence to construct the bighorn sheep mitochondrial genome.

J Hered 2012 Jan-Feb;103(1):140-6. Epub 2011 Sep 26.

Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada.

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http://dx.doi.org/10.1093/jhered/esr104DOI Listing
April 2012

Genome-wide scan identifies loci associated with classical BSE occurrence.

PLoS One 2011 4;6(11):e26819. Epub 2011 Nov 4.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0026819PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3208576PMC
March 2012

Impact of feed efficiency and diet on adaptive variations in the bacterial community in the rumen fluid of cattle.

Appl Environ Microbiol 2012 Feb 9;78(4):1203-14. Epub 2011 Dec 9.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.

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http://dx.doi.org/10.1128/AEM.05114-11DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3273029PMC
February 2012

Whole genome resequencing of black Angus and Holstein cattle for SNP and CNV discovery.

BMC Genomics 2011 Nov 15;12:559. Epub 2011 Nov 15.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G 2P5, Canada.

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http://dx.doi.org/10.1186/1471-2164-12-559DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3229636PMC
November 2011

MicroRNA regulation in mammalian adipogenesis.

Exp Biol Med (Maywood) 2011 Sep 15;236(9):997-1004. Epub 2011 Aug 15.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.

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http://dx.doi.org/10.1258/ebm.2011.011101DOI Listing
September 2011

Gene expression in the medulla following oral infection of cattle with bovine spongiform encephalopathy.

J Toxicol Environ Health A 2011 ;74(2-4):110-26

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.

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http://dx.doi.org/10.1080/15287394.2011.529061DOI Listing
February 2011

Transcriptome analysis of the medulla tissue from cattle in response to bovine spongiform encephalopathy using digital gene expression tag profiling.

J Toxicol Environ Health A 2011 ;74(2-4):127-37

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.

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http://dx.doi.org/10.1080/15287394.2011.529062DOI Listing
February 2011

Characterization of microRNA expression in bovine adipose tissues: a potential regulatory mechanism of subcutaneous adipose tissue development.

BMC Mol Biol 2010 Apr 27;11:29. Epub 2010 Apr 27.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G2P5, Canada.

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http://dx.doi.org/10.1186/1471-2199-11-29DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2874793PMC
April 2010

A principal component regression based genome wide analysis approach reveals the presence of a novel QTL on BTA7 for MAP resistance in holstein cattle.

Genomics 2010 Mar 7;95(3):176-82. Epub 2010 Jan 7.

Centre for Genetic Improvement of Livestock, Department of Animal and Poultry Science, University of Guelph, Guelph, Ontario, Canada N1G 2W1.

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http://dx.doi.org/10.1016/j.ygeno.2010.01.001DOI Listing
March 2010

A 2cM genome-wide scan of European Holstein cattle affected by classical BSE.

BMC Genet 2010 Mar 29;11:20. Epub 2010 Mar 29.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Canada.

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http://dx.doi.org/10.1186/1471-2156-11-20DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2853485PMC
March 2010

Microarray analysis of differentially expressed genes from Peyer's patches of cattle orally challenged with bovine spongiform encephalopathy.

J Toxicol Environ Health A 2009 ;72(17-18):1008-13

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada.

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http://dx.doi.org/10.1080/15287390903084199DOI Listing
September 2009

Characterization of bovine miRNAs by sequencing and bioinformatics analysis.

BMC Mol Biol 2009 Sep 16;10:90. Epub 2009 Sep 16.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB T6G2P5, Canada.

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http://dx.doi.org/10.1186/1471-2199-10-90DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2761914PMC
September 2009

The genome sequence of taurine cattle: a window to ruminant biology and evolution.

Authors:
Christine G Elsik Ross L Tellam Kim C Worley Richard A Gibbs Donna M Muzny George M Weinstock David L Adelson Evan E Eichler Laura Elnitski Roderic Guigó Debora L Hamernik Steve M Kappes Harris A Lewin David J Lynn Frank W Nicholas Alexandre Reymond Monique Rijnkels Loren C Skow Evgeny M Zdobnov Lawrence Schook James Womack Tyler Alioto Stylianos E Antonarakis Alex Astashyn Charles E Chapple Hsiu-Chuan Chen Jacqueline Chrast Francisco Câmara Olga Ermolaeva Charlotte N Henrichsen Wratko Hlavina Yuri Kapustin Boris Kiryutin Paul Kitts Felix Kokocinski Melissa Landrum Donna Maglott Kim Pruitt Victor Sapojnikov Stephen M Searle Victor Solovyev Alexandre Souvorov Catherine Ucla Carine Wyss Juan M Anzola Daniel Gerlach Eran Elhaik Dan Graur Justin T Reese Robert C Edgar John C McEwan Gemma M Payne Joy M Raison Thomas Junier Evgenia V Kriventseva Eduardo Eyras Mireya Plass Ravikiran Donthu Denis M Larkin James Reecy Mary Q Yang Lin Chen Ze Cheng Carol G Chitko-McKown George E Liu Lakshmi K Matukumalli Jiuzhou Song Bin Zhu Daniel G Bradley Fiona S L Brinkman Lilian P L Lau Matthew D Whiteside Angela Walker Thomas T Wheeler Theresa Casey J Bruce German Danielle G Lemay Nauman J Maqbool Adrian J Molenaar Seongwon Seo Paul Stothard Cynthia L Baldwin Rebecca Baxter Candice L Brinkmeyer-Langford Wendy C Brown Christopher P Childers Timothy Connelley Shirley A Ellis Krista Fritz Elizabeth J Glass Carolyn T A Herzig Antti Iivanainen Kevin K Lahmers Anna K Bennett C Michael Dickens James G R Gilbert Darren E Hagen Hanni Salih Jan Aerts Alexandre R Caetano Brian Dalrymple Jose Fernando Garcia Clare A Gill Stefan G Hiendleder Erdogan Memili Diane Spurlock John L Williams Lee Alexander Michael J Brownstein Leluo Guan Robert A Holt Steven J M Jones Marco A Marra Richard Moore Stephen S Moore Andy Roberts Masaaki Taniguchi Richard C Waterman Joseph Chacko Mimi M Chandrabose Andy Cree Marvin Diep Dao Huyen H Dinh Ramatu Ayiesha Gabisi Sandra Hines Jennifer Hume Shalini N Jhangiani Vandita Joshi Christie L Kovar Lora R Lewis Yih-Shin Liu John Lopez Margaret B Morgan Ngoc Bich Nguyen Geoffrey O Okwuonu San Juana Ruiz Jireh Santibanez Rita A Wright Christian Buhay Yan Ding Shannon Dugan-Rocha Judith Herdandez Michael Holder Aniko Sabo Amy Egan Jason Goodell Katarzyna Wilczek-Boney Gerald R Fowler Matthew Edward Hitchens Ryan J Lozado Charles Moen David Steffen James T Warren Jingkun Zhang Readman Chiu Jacqueline E Schein K James Durbin Paul Havlak Huaiyang Jiang Yue Liu Xiang Qin Yanru Ren Yufeng Shen Henry Song Stephanie Nicole Bell Clay Davis Angela Jolivet Johnson Sandra Lee Lynne V Nazareth Bella Mayurkumar Patel Ling-Ling Pu Selina Vattathil Rex Lee Williams Stacey Curry Cerissa Hamilton Erica Sodergren David A Wheeler Wes Barris Gary L Bennett André Eggen Ronnie D Green Gregory P Harhay Matthew Hobbs Oliver Jann John W Keele Matthew P Kent Sigbjørn Lien Stephanie D McKay Sean McWilliam Abhirami Ratnakumar Robert D Schnabel Timothy Smith Warren M Snelling Tad S Sonstegard Roger T Stone Yoshikazu Sugimoto Akiko Takasuga Jeremy F Taylor Curtis P Van Tassell Michael D Macneil Antonio R R Abatepaulo Colette A Abbey Virpi Ahola Iassudara G Almeida Ariel F Amadio Elen Anatriello Suria M Bahadue Fernando H Biase Clayton R Boldt Jeffery A Carroll Wanessa A Carvalho Eliane P Cervelatti Elsa Chacko Jennifer E Chapin Ye Cheng Jungwoo Choi Adam J Colley Tatiana A de Campos Marcos De Donato Isabel K F de Miranda Santos Carlo J F de Oliveira Heather Deobald Eve Devinoy Kaitlin E Donohue Peter Dovc Annett Eberlein Carolyn J Fitzsimmons Alessandra M Franzin Gustavo R Garcia Sem Genini Cody J Gladney Jason R Grant Marion L Greaser Jonathan A Green Darryl L Hadsell Hatam A Hakimov Rob Halgren Jennifer L Harrow Elizabeth A Hart Nicola Hastings Marta Hernandez Zhi-Liang Hu Aaron Ingham Terhi Iso-Touru Catherine Jamis Kirsty Jensen Dimos Kapetis Tovah Kerr Sari S Khalil Hasan Khatib Davood Kolbehdari Charu G Kumar Dinesh Kumar Richard Leach Justin C-M Lee Changxi Li Krystin M Logan Roberto Malinverni Elisa Marques William F Martin Natalia F Martins Sandra R Maruyama Raffaele Mazza Kim L McLean Juan F Medrano Barbara T Moreno Daniela D Moré Carl T Muntean Hari P Nandakumar Marcelo F G Nogueira Ingrid Olsaker Sameer D Pant Francesca Panzitta Rosemeire C P Pastor Mario A Poli Nathan Poslusny Satyanarayana Rachagani Shoba Ranganathan Andrej Razpet Penny K Riggs Gonzalo Rincon Nelida Rodriguez-Osorio Sandra L Rodriguez-Zas Natasha E Romero Anne Rosenwald Lillian Sando Sheila M Schmutz Libing Shen Laura Sherman Bruce R Southey Ylva Strandberg Lutzow Jonathan V Sweedler Imke Tammen Bhanu Prakash V L Telugu Jennifer M Urbanski Yuri T Utsunomiya Chris P Verschoor Ashley J Waardenberg Zhiquan Wang Robert Ward Rosemarie Weikard Thomas H Welsh Stephen N White Laurens G Wilming Kris R Wunderlich Jianqi Yang Feng-Qi Zhao

Science 2009 Apr;324(5926):522-8

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http://dx.doi.org/10.1126/science.1169588DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2943200PMC
April 2009

Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.

Science 2009 Apr;324(5926):528-32

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http://dx.doi.org/10.1126/science.1167936DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2735092PMC
April 2009

Comparative analysis on gene expression profiles in cattle subcutaneous fat tissues.

Comp Biochem Physiol Part D Genomics Proteomics 2008 Dec 2;3(4):251-6. Epub 2008 Jul 2.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada T6G 2P5.

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http://dx.doi.org/10.1016/j.cbd.2008.06.002DOI Listing
December 2008

High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle.

BMC Genet 2008 Jul 8;9:45. Epub 2008 Jul 8.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2P5, Canada.

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http://dx.doi.org/10.1186/1471-2156-9-45DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2478670PMC
July 2008

SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries.

Nat Methods 2008 Mar 24;5(3):247-52. Epub 2008 Feb 24.

Bovine Functional Genomics Laboratory, United States Department of Agriculture, Agricultural Research Service, 10300 Baltimore Avenue, Beltsville, Maryland 20705, USA.

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http://www.nature.com/articles/nmeth.1185
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http://dx.doi.org/10.1038/nmeth.1185DOI Listing
March 2008

Adipogenesis of bovine perimuscular preadipocytes.

Biochem Biophys Res Commun 2008 Feb 4;366(1):54-9. Epub 2007 Dec 4.

Department of Agricultural, Food and Nutritional Science, University of Alberta, 410 Ag-For Centre, Edmonton, Alta., Canada T6G 2P5.

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http://dx.doi.org/10.1016/j.bbrc.2007.11.110DOI Listing
February 2008

Gene expression patterns of bovine perimuscular preadipocytes during adipogenesis.

Biochem Biophys Res Commun 2008 Feb 3;366(2):346-51. Epub 2007 Dec 3.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, Alberta, Canada T6G 2P5.

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http://dx.doi.org/10.1016/j.bbrc.2007.11.111DOI Listing
February 2008

High resolution radiation hybrid maps of bovine chromosomes 19 and 29: comparison with the bovine genome sequence assembly.

BMC Genomics 2007 Sep 4;8:310. Epub 2007 Sep 4.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton T6G2P5, Alberta, Canada.

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http://dx.doi.org/10.1186/1471-2164-8-310DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2064936PMC
September 2007

A high resolution radiation hybrid map of bovine chromosome 14 identifies scaffold rearrangement in the latest bovine assembly.

BMC Genomics 2007 Jul 26;8:254. Epub 2007 Jul 26.

Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada.

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http://dx.doi.org/10.1186/1471-2164-8-254DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1959194PMC
July 2007

Gene expression profiling of the bovine gastrointestinal tract.

Genome 2004 Aug;47(4):639-49

Department of Agricultural, Food, and Nutritional Science, University of Alberta, 4-10 Agriculture Forestry Centre, Edmonton, Alberta T6G 2P5, Canada.

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http://dx.doi.org/10.1139/g04-030DOI Listing
August 2004