Stephen A Smith

Stephen A Smith

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Stephen A Smith

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Target sequence capture in the Brazil nut family (Lecythidaceae): Marker selection and in silico capture from genome skimming data.

Mol Phylogenet Evol 2019 06 25;135:98-104. Epub 2019 Feb 25.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA; Smithsonian Tropical Research Institute, Panama City 0843-03092, Panama.

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http://dx.doi.org/10.1016/j.ympev.2019.02.020DOI Listing
June 2019

Plastid phylogenomic insights into the evolution of Caryophyllales.

Mol Phylogenet Evol 2019 05 5;134:74-86. Epub 2019 Feb 5.

Germplasm Bank of Wild Species, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China; Key Laboratory for Plant Biodiversity and Biogeography, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, China. Electronic address:

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http://dx.doi.org/10.1016/j.ympev.2018.12.023DOI Listing
May 2019

Spatial Phylogenetics of Florida Vascular Plants: The Effects of Calibration and Uncertainty on Diversity Estimates.

iScience 2019 Jan 8;11:57-70. Epub 2018 Dec 8.

Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Genetics Institute, University of Florida, Gainesville, FL 32608, USA; Biodiversity Institute, University of Florida, Gainesville, FL 32611, USA.

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http://dx.doi.org/10.1016/j.isci.2018.12.002DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6308250PMC
January 2019

Modulation of innate immunity in Nile tilapia (Oreochromis niloticus) by dietary supplementation of Bacillus subtilis endospores.

Fish Shellfish Immunol 2018 Dec 31;83:171-179. Epub 2018 Aug 31.

Department of Food Science and Technology, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061, USA. Electronic address:

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https://linkinghub.elsevier.com/retrieve/pii/S10504648183053
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http://dx.doi.org/10.1016/j.fsi.2018.08.062DOI Listing
December 2018

So many genes, so little time: A practical approach to divergence-time estimation in the genomic era.

PLoS One 2018 17;13(5):e0197433. Epub 2018 May 17.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0197433PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5957400PMC
November 2018

Analyzing Contentious Relationships and Outlier Genes in Phylogenomics.

Syst Biol 2018 09;67(5):916-924

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA.

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http://dx.doi.org/10.1093/sysbio/syy043DOI Listing
September 2018

Characterization of the histologic appearance of normal gill tissue using special staining techniques.

J Vet Diagn Invest 2018 Sep 20;30(5):688-698. Epub 2018 Jul 20.

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine, Virginia Tech, Blacksburg, VA (Smith, Coleman, Alex).

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http://dx.doi.org/10.1177/1040638718791819DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6505783PMC
September 2018

Production of omega-3 enriched tilapia through the dietary use of algae meal or fish oil: Improved nutrient value of fillet and offal.

PLoS One 2018 11;13(4):e0194241. Epub 2018 Apr 11.

Department of Food Science and Technology, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, United States of America.

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http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0194241PLOS
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5894990PMC
July 2018

The Past Sure is Tense: On Interpreting Phylogenetic Divergence Time Estimates.

Syst Biol 2018 Mar;67(2):340-353

Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI 48109, USA.

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http://dx.doi.org/10.1093/sysbio/syx074DOI Listing
March 2018

Challenges of comprehensive taxon sampling in comparative biology: Wrestling with rosids.

Am J Bot 2018 03 17;105(3):433-445. Epub 2018 Apr 17.

Florida Museum of Natural History, Gainesville, FL, 32611, USA.

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http://dx.doi.org/10.1002/ajb2.1059DOI Listing
March 2018

Using and navigating the plant tree of life.

Am J Bot 2018 Mar 27;105(3):287-290. Epub 2018 Apr 27.

Florida Museum of Natural History, University of Florida, P. O. Box 117800, Gainesville, FL, 32611, USA.

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http://dx.doi.org/10.1002/ajb2.1071DOI Listing
March 2018

A matter of phylogenetic scale: Distinguishing incomplete lineage sorting from lateral gene transfer as the cause of gene tree discord in recent versus deep diversification histories.

Am J Bot 2018 03 30;105(3):376-384. Epub 2018 Apr 30.

Department of Ecology and Evolutionary Biology, Museum of Zoology, University of Michigan, 1109 Geddes Avenue, Ann Arbor, MI, 48109-1079, USA.

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http://dx.doi.org/10.1002/ajb2.1064DOI Listing
March 2018

Quartet Sampling distinguishes lack of support from conflicting support in the green plant tree of life.

Am J Bot 2018 03 14;105(3):385-403. Epub 2018 Feb 14.

Department of Ecology and Evolutionary Biology, University of Michigan, 830 North University, Ann Arbor, Michigan, 48109, USA.

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http://dx.doi.org/10.1002/ajb2.1016DOI Listing
March 2018

Constructing a broadly inclusive seed plant phylogeny.

Am J Bot 2018 03 14;105(3):302-314. Epub 2018 Feb 14.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, 48109, USA.

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http://dx.doi.org/10.1002/ajb2.1019DOI Listing
March 2018

Evolutionary history of the angiosperm flora of China.

Nature 2018 02 31;554(7691):234-238. Epub 2018 Jan 31.

State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China.

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http://www.nature.com/doifinder/10.1038/nature25485
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http://dx.doi.org/10.1038/nature25485DOI Listing
February 2018

Disparity, diversity, and duplications in the Caryophyllales.

New Phytol 2018 01 11;217(2):836-854. Epub 2017 Sep 11.

Department of Biology, Oberlin College, 119 Woodland St, Oberlin, OH, 44074-1097, USA.

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http://dx.doi.org/10.1111/nph.14772DOI Listing
January 2018

Improved transcriptome sampling pinpoints 26 ancient and more recent polyploidy events in Caryophyllales, including two allopolyploidy events.

New Phytol 2018 01 25;217(2):855-870. Epub 2017 Sep 25.

Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI, 48109-1048, USA.

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http://dx.doi.org/10.1111/nph.14812DOI Listing
January 2018

Relaxation of tyrosine pathway regulation underlies the evolution of betalain pigmentation in Caryophyllales.

New Phytol 2018 01 9;217(2):896-908. Epub 2017 Oct 9.

Department of Botany, University of Wisconsin-Madison, Madison, WI, 53706, USA.

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http://dx.doi.org/10.1111/nph.14822DOI Listing
January 2018

The development of scientific consensus: Analyzing conflict and concordance among avian phylogenies.

Mol Phylogenet Evol 2017 11 7;116:69-77. Epub 2017 Aug 7.

Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA. Electronic address:

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http://dx.doi.org/10.1016/j.ympev.2017.08.002DOI Listing
November 2017

Hematologic and plasma chemistry RIs for cultured Striped catfish (Pangasius hypophthalmus) in recirculating aquaculture systems.

Vet Clin Pathol 2017 Sep 7;46(3):457-465. Epub 2017 Aug 7.

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Blacksburg, VA, USA.

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http://dx.doi.org/10.1111/vcp.12513DOI Listing
September 2017

Phyx: phylogenetic tools for unix.

Bioinformatics 2017 Jun;33(12):1886-1888

Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA.

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http://dx.doi.org/10.1093/bioinformatics/btx063DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5870855PMC
June 2017

Novel case of paternal paracentric inversion causing partial trisomy 13 and review of the literature.

Am J Med Genet A 2017 Jun 10;173(6):1673-1680. Epub 2017 Apr 10.

Division of Medical Genetics, Department of Pediatrics, San Antonio Military Medical Center, San Antonio, Texas.

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http://dx.doi.org/10.1002/ajmg.a.38192DOI Listing
June 2017

Widespread paleopolyploidy, gene tree conflict, and recalcitrant relationships among the carnivorous Caryophyllales.

Am J Bot 2017 Jun 20;104(6):858-867. Epub 2017 Jun 20.

Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, Michigan 48109-1048 USA

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http://dx.doi.org/10.3732/ajb.1700083DOI Listing
June 2017

An efficient field and laboratory workflow for plant phylotranscriptomic projects.

Appl Plant Sci 2017 Mar 14;5(3). Epub 2017 Mar 14.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, 830 North University Avenue, Ann Arbor, Michigan 48109 USA.

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http://doi.wiley.com/10.3732/apps.1600128
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http://dx.doi.org/10.3732/apps.1600128DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5357122PMC
March 2017

Postoperative Nonsteroidal Anti-inflammatory Drug Use and Intestinal Anastomotic Dehiscence: A Systematic Review and Meta-Analysis.

Dis Colon Rectum 2016 Nov;59(11):1087-1097

Department of Surgery, University of Calgary and the Foothills Medical Centre, Calgary, Alberta, Canada.

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http://dx.doi.org/10.1097/DCR.0000000000000666DOI Listing
November 2016

Fish and chips: Curious to know what those little white spots might be on your next fish?

Vet Clin Pathol 2016 Jun 29;45(2):213-4. Epub 2016 Apr 29.

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Tech, Blacksburg, VA, USA.

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http://dx.doi.org/10.1111/vcp.12354DOI Listing
June 2016

Phylesystem: a git-based data store for community-curated phylogenetic estimates.

Bioinformatics 2015 Sep 4;31(17):2794-800. Epub 2015 May 4.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI, USA.

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http://dx.doi.org/10.1093/bioinformatics/btv276DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4547614PMC
September 2015

Lineage-specific gene radiations underlie the evolution of novel betalain pigmentation in Caryophyllales.

New Phytol 2015 Sep 13;207(4):1170-80. Epub 2015 May 13.

Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Avenue, Ann Arbor, MI, 48109-1048, USA.

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http://dx.doi.org/10.1111/nph.13441DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4557044PMC
September 2015

Hematology of the Domestic Ferret (Mustela putorius furo).

Clin Lab Med 2015 Sep;35(3):609-16

North End Center, Virginia Tech, 300 Turner Street Northwest, Suite 4120, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cll.2015.05.009DOI Listing
September 2015

Hematological Assessment in Pet Rabbits: Blood Sample Collection and Blood Cell Identification.

Clin Lab Med 2015 Sep;35(3):617-27

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, 245 Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cll.2015.05.010DOI Listing
September 2015

Hematologic Assessment in Pet Rats, Mice, Hamsters, and Gerbils: Blood Sample Collection and Blood Cell Identification.

Clin Lab Med 2015 Sep;35(3):629-40

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, 245 Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cll.2015.05.011DOI Listing
September 2015

Hematological Assessment in Pet Guinea Pigs (Cavia porcellus): Blood Sample Collection and Blood Cell Identification.

Clin Lab Med 2015 Sep;35(3):641-8

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cll.2015.05.012DOI Listing
September 2015

Hematology of the domestic ferret (Mustela putorius furo).

Vet Clin North Am Exot Anim Pract 2015 Jan;18(1):1-8

North End Center, Virginia Tech, 300 Turner Street Northwest, Suite 4120, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cvex.2014.09.005DOI Listing
January 2015

Hematological assessment in pet rabbits: blood sample collection and blood cell identification.

Vet Clin North Am Exot Anim Pract 2015 Jan;18(1):9-19

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, 245 Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cvex.2014.09.003DOI Listing
January 2015

Hematologic assessment in pet rats, mice, hamsters, and gerbils: blood sample collection and blood cell identification.

Vet Clin North Am Exot Anim Pract 2015 Jan;18(1):21-32

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, 245 Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cvex.2014.09.004DOI Listing
January 2015

Hematological assessment in pet guinea pigs (Cavia porcellus): blood sample collection and blood cell identification.

Vet Clin North Am Exot Anim Pract 2015 Jan;18(1):33-40

Department of Biomedical Sciences and Pathobiology (0442), Virginia-Maryland Regional College of Veterinary Medicine, Duck Pond Drive, Blacksburg, VA 24061, USA.

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http://dx.doi.org/10.1016/j.cvex.2014.09.002DOI Listing
January 2015

Complete Genome Sequence of Sphingobacterium sp. Strain ML3W, Isolated from Wings of Myotis lucifugus Infected with White Nose Syndrome.

Genome Announc 2015 Jan 22;3(1). Epub 2015 Jan 22.

Biology & Chemistry Department, Delaware Technical Community College, Newark, Delaware, USA

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http://dx.doi.org/10.1128/genomeA.01477-14DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4319595PMC
January 2015

Orthology inference in nonmodel organisms using transcriptomes and low-coverage genomes: improving accuracy and matrix occupancy for phylogenomics.

Mol Biol Evol 2014 Nov 25;31(11):3081-92. Epub 2014 Aug 25.

Department of Ecology & Evolutionary Biology, University of Michigan, Ann Arbor

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http://dx.doi.org/10.1093/molbev/msu245DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4209138PMC
November 2014

Another look at the root of the angiosperms reveals a familiar tale.

Syst Biol 2014 May 3;63(3):368-82. Epub 2014 Jan 3.

Department of Biology, University of Florida, Gainesville, FL 32611, USA; Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA; Department of Biological Sciences, Eastern Kentucky University, Richmond, KY 40475, USA; Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48105, USA; Department of Biology, Oberlin College, Oberlin, OH 44074, USA; and National Herbarium of New South Wales, Botanic Gardens Trust, Sydney, NSW 2000, Australia.

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http://dx.doi.org/10.1093/sysbio/syt108DOI Listing
May 2014

PUmPER: phylogenies updated perpetually.

Bioinformatics 2014 May 28;30(10):1476-7. Epub 2014 Jan 28.

Scientific Computing Group, Heidelberg Institute for Theoretical Studies (HITS gGmbH), Schloss-Wolfsbrunnenweg 35, D-69118 Heidelberg, Baden-Württemberg, Germany, Texas Advanced Computing Center, University of Texas, Austin, TX, 78758, USA, University of Michigan, Ann Arbor Department of Ecology and Evolutionary Biology, 48109, MI, USA and Karlsruhe Institute of Technology, Institute for Theoretical Informatics, Postfach 6980, 76128 Karlsruhe, Baden-Württemberg, Germany.

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http://dx.doi.org/10.1093/bioinformatics/btu053DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4016711PMC
May 2014

Analyzing and synthesizing phylogenies using tree alignment graphs.

PLoS Comput Biol 2013 26;9(9):e1003223. Epub 2013 Sep 26.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, United States of America.

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http://dx.doi.org/10.1371/journal.pcbi.1003223DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3784503PMC
April 2014

Rates of speciation and morphological evolution are correlated across the largest vertebrate radiation.

Nat Commun 2013 ;4:1958

Department of Integrative Biology, Museum of Vertebrate Zoology, University of California, Berkeley, California 94609, USA.

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http://dx.doi.org/10.1038/ncomms2958DOI Listing
December 2013

Microwave accelerated synthesis of isoxazole hydrazide inhibitors of the system xc- transporter: Initial homology model.

Bioorg Med Chem Lett 2013 Nov 27;23(21):5931-5. Epub 2013 Aug 27.

Department of Biomedical & Pharmaceutical Sciences, Center for Structural & Functional Neuroscience, The University of Montana, Missoula, MT 59812, United States; Medicinal Chemistry Graduate Program, The University of Montana, Missoula, MT 59812, United States.

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http://dx.doi.org/10.1016/j.bmcl.2013.08.080DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3876936PMC
November 2013

Zebrafish resources on the internet.

Authors:
Stephen A Smith

ILAR J 2012 ;53(2):208-14

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Polytechnic Institute & State University, Blacksburg, VA 24060, USA.

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http://dx.doi.org/10.1093/ilar.53.2.208DOI Listing
August 2013

Optimizing de novo assembly of short-read RNA-seq data for phylogenomics.

BMC Genomics 2013 May 14;14:328. Epub 2013 May 14.

Department of Ecology & Evolutionary Biology, University of Michigan, 830 North University Ave, Ann Arbor, MI 48109-1048, USA.

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http://dx.doi.org/10.1186/1471-2164-14-328DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3663818PMC
May 2013

treePL: divergence time estimation using penalized likelihood for large phylogenies.

Bioinformatics 2012 Oct 20;28(20):2689-90. Epub 2012 Aug 20.

Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, MI 48109, USA.

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http://dx.doi.org/10.1093/bioinformatics/bts492DOI Listing
October 2012

Mutation spectrum in the large GTPase dynamin 2, and genotype-phenotype correlation in autosomal dominant centronuclear myopathy.

Hum Mutat 2012 Jun 4;33(6):949-59. Epub 2012 Apr 4.

Department of Translational Medicine and Neurogenetics, Institut de Génétique et de Biologie Moléculaire et Cellulaire, INSERM U964/CNRS UMR7104, University of Strasbourg, Collège de France, Illkirch, France.

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http://dx.doi.org/10.1002/humu.22067DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3374402PMC
June 2012

Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees.

BMC Bioinformatics 2011 Dec 13;12:470. Epub 2011 Dec 13.

The Exelixis Lab, Scientific Computing Group, Heidelberg Institute for Theoretical Studies, Schloss-Wolfsbrunnenweg 35, D-69118 Heidelberg, Germany.

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http://dx.doi.org/10.1186/1471-2105-12-470DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3267785PMC
December 2011

Culture and maintenance of selected invertebrates in the laboratory and classroom.

ILAR J 2011 ;52(2):153-64

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061-0442, USA.

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http://dx.doi.org/10.1093/ilar.52.2.153DOI Listing
October 2011

Invertebrate resources on the internet.

Authors:
Stephen A Smith

ILAR J 2011 ;52(2):165-74

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Blacksburg, VA 24060-0442, USA.

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http://dx.doi.org/10.1093/ilar.52.2.165DOI Listing
October 2011

Resolving the evolutionary relationships of molluscs with phylogenomic tools.

Nature 2011 Oct 26;480(7377):364-7. Epub 2011 Oct 26.

Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island 02912, USA.

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http://dunnlab.org/assets/Smith_etal2011.pdf
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http://www.nature.com/doifinder/10.1038/nature10526
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http://dx.doi.org/10.1038/nature10526DOI Listing
October 2011

Utilizing a magnetic locator to search for buried firearms and miscellaneous weapons at a controlled research site.

J Forensic Sci 2011 Sep 10;56(5):1289-95. Epub 2011 May 10.

Department of Anthropology, University of Central Florida, 4000 Central Florida Blvd., Orlando, FL 32816, USA.

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http://dx.doi.org/10.1111/j.1556-4029.2011.01802.xDOI Listing
September 2011

Hematology, leukocyte cytochemical analysis, plasma biochemistry, and plasma electrophoresis of wild-caught and captive-bred Gila monsters (Heloderma suspectum).

Vet Clin Pathol 2011 Sep 9;40(3):316-23. Epub 2011 Aug 9.

Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Blacksburg, VA 24061-0442, USA.

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http://dx.doi.org/10.1111/j.1939-165X.2011.00337.xDOI Listing
September 2011

Detecting buried metallic weapons in a controlled setting using a conductivity meter.

Forensic Sci Int 2011 May 13;208(1-3):18-24. Epub 2010 Nov 13.

University of South Florida, Department of Anthropology, Tampa, FL 33620, United States.

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https://anthropology.cos.ucf.edu/main/wp-content/uploads/201
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http://linkinghub.elsevier.com/retrieve/pii/S037907381000478
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http://dx.doi.org/10.1016/j.forsciint.2010.10.019DOI Listing
May 2011

Disorders of the respiratory system in pet and ornamental fish.

Vet Clin North Am Exot Anim Pract 2011 May;14(2):179-206, v

Aquatic Veterinary Services of WNY, 5 Corners Animal Hospital, 2799 Southwestern Boulevard, Suite 100, Orchard Park, NY 14127, USA.

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http://dx.doi.org/10.1016/j.cvex.2011.03.004DOI Listing
May 2011

Understanding angiosperm diversification using small and large phylogenetic trees.

Am J Bot 2011 Mar 2;98(3):404-14. Epub 2011 Mar 2.

Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island 02912, USA.

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http://blackrim.org/files/smithetal2011.pdf
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http://www.amjbot.org/cgi/doi/10.3732/ajb.1000481
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http://dx.doi.org/10.3732/ajb.1000481DOI Listing
March 2011

Effect of common aquaculture chemicals against Edwardsiella ictaluri and E. tarda.

J Aquat Anim Health 2010 Dec;22(4):224-8

Aquatic Medicine Laboratory, Department of Biomedical Sciences and Pathobiology, Virginia-Maryland Regional College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Duck Pond Drive, Blacksburg, Virginia 24061-0442, USA.

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http://dx.doi.org/10.1577/H10-020.1DOI Listing
December 2010

Elucidating the evolutionary history of the Southeast Asian, holoparasitic, giant-flowered Rafflesiaceae: pliocene vicariance, morphological convergence and character displacement.

Mol Phylogenet Evol 2010 Nov 17;57(2):620-33. Epub 2010 Aug 17.

National Centre for Biosystematics, Natural History Museum, University of Oslo, P.O. Box 1172 Blindern, NO-0318 Oslo, Norway.

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http://dx.doi.org/10.1016/j.ympev.2010.08.005DOI Listing
November 2010

Species selection maintains self-incompatibility.

Science 2010 Oct;330(6003):493-5

Department of Biological Sciences, University of Illinois at Chicago, 840 West Taylor Street, M/C 067, Chicago, IL 60607, USA.

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http://dx.doi.org/10.1126/science.1194513DOI Listing
October 2010

Combining historical biogeography with niche modeling in the Caprifolium clade of Lonicera (Caprifoliaceae, Dipsacales).

Syst Biol 2010 May 22;59(3):322-41. Epub 2010 Mar 22.

Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520, USA.

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http://dx.doi.org/10.1093/sysbio/syq011DOI Listing
May 2010

Testing the waters: IACUC issues associated with fish.

ILAR J 2009 ;50(4):397-401

Department of Biomedical Sciences and Pathobiology, VA/MD Regional College of Veterinary Medicine, Virginia Polytechnic Institute and State University, Duck Pond Drive, Phase II, Blacksburg, VA 24061-0442, USA.

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http://dx.doi.org/10.1093/ilar.50.4.397DOI Listing
March 2010

Pathology in practice. Severe, chronic, focal, granulomatous, nodular and ulcerative stomatitis with myxosporidia (Myxobolus sp.).

J Am Vet Med Assoc 2010 Mar;236(6):631-3

NYC Veterinary Specialists and Cancer Treatment Center, 410 W 55th St, New York, NY 10019, USA.

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http://dx.doi.org/10.2460/javma.236.6.631DOI Listing
March 2010

An uncorrelated relaxed-clock analysis suggests an earlier origin for flowering plants.

Proc Natl Acad Sci U S A 2010 Mar 16;107(13):5897-902. Epub 2010 Mar 16.

National Evolutionary Synthesis Center, Durham, NC 27705, USA.

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http://dx.doi.org/10.1073/pnas.1001225107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2851901PMC
March 2010

Controlled research utilizing a basic all-metal detector in the search for buried firearms and miscellaneous weapons.

Forensic Sci Int 2010 Feb 28;195(1-3):121-7. Epub 2009 Dec 28.

University of Central Florida, Department of Anthropology, Orlando, FL 32816, USA.

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http://dx.doi.org/10.1016/j.forsciint.2009.12.003DOI Listing
February 2010

Phylogenetic analyses reveal the shady history of C4 grasses.

Proc Natl Acad Sci U S A 2010 Feb 8;107(6):2532-7. Epub 2010 Feb 8.

Department of Ecology and Evolutionary Biology, Brown University, Providence, RI 02912, USA.

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http://www.pnas.org/cgi/doi/10.1073/pnas.0909672107
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http://dx.doi.org/10.1073/pnas.0909672107DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2823882PMC
February 2010

Myxobolus neurophilus: morphologic, histopathologic and molecular characterization.

Dis Aquat Organ 2010 Feb;89(1):51-61

University of Pennsylvania, School of Veterinary Medicine, Kennett Square, Pennsylvania 19348, USA.

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http://www.int-res.com/abstracts/dao/v89/n1/p51-61/
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http://dx.doi.org/10.3354/dao02180DOI Listing
February 2010

Life history influences rates of climatic niche evolution in flowering plants.

Proc Biol Sci 2009 Dec 23;276(1677):4345-52. Epub 2009 Sep 23.

National Evolutionary Synthesis Center, 2024 W. Main Street A200, Durham, NC 27705, USA.

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http://dx.doi.org/10.1098/rspb.2009.1176DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2817099PMC
December 2009

Morphogenera, monophyly, and macroevolution.

Proc Natl Acad Sci U S A 2009 Sep 1;106(36):E97-8; author reply E99-100. Epub 2009 Sep 1.

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http://dx.doi.org/10.1073/pnas.0906918106DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2741288PMC
September 2009

Climate, niche evolution, and diversification of the "bird-cage" evening primroses (Oenothera, sections Anogra and Kleinia).

Am Nat 2009 Feb;173(2):225-40

Department of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut 06511, USA.

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https://www.journals.uchicago.edu/doi/10.1086/595757
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http://dx.doi.org/10.1086/595757DOI Listing
February 2009

Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches.

BMC Evol Biol 2009 Feb 11;9:37. Epub 2009 Feb 11.

National Evolutionary Synthesis Center, 2024 W Main St A200, Durham, NC 27705, USA.

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http://dx.doi.org/10.1186/1471-2148-9-37DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2645364PMC
February 2009

Rates of molecular evolution are linked to life history in flowering plants.

Science 2008 Oct;322(5898):86-9

Department of Ecology and Evolutionary Biology, 21 Sachem Street, Post Office Box 208105, Yale University, New Haven, CT 06520-8105, USA.

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http://dx.doi.org/10.1126/science.1163197DOI Listing
October 2008