Publications by authors named "Steffen Durinck"

39Publications

Atypical presentation and pathogenesis of a macaque lymphocryptoviral-associated B-cell lymphoma in a cynomolgus monkey.

Vet Clin Pathol 2020 Mar 3;49(1):130-136. Epub 2020 Feb 3.

Genentech, A Member of the Roche Group, South San Francisco, CA, USA.

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http://dx.doi.org/10.1111/vcp.12822DOI Listing
March 2020

Evaluating the quality of the 1000 genomes project data.

BMC Genomics 2019 Aug 16;20(1):620. Epub 2019 Aug 16.

Institute for Human Genetics, University of California, San Francisco, CA, 94143, USA.

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http://dx.doi.org/10.1186/s12864-019-5957-xDOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6696682PMC
August 2019

ERK Mutations and Amplification Confer Resistance to ERK-Inhibitor Therapy.

Clin Cancer Res 2018 08 14;24(16):4044-4055. Epub 2018 May 14.

Molecular Biology Department, Genentech Inc., South San Francisco, California.

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http://clincancerres.aacrjournals.org/lookup/doi/10.1158/107
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http://dx.doi.org/10.1158/1078-0432.CCR-17-3674DOI Listing
August 2018

Single-cell RNA sequencing identifies distinct mouse medial ganglionic eminence cell types.

Sci Rep 2017 03 31;7:45656. Epub 2017 Mar 31.

Department of Molecular Biology, Genentech, 1 DNA Way, South San Francisco, CA 94080, USA.

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http://dx.doi.org/10.1038/srep45656DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC5374502PMC
March 2017

The BioMart community portal: an innovative alternative to large, centralized data repositories.

Authors:
Damian Smedley Syed Haider Steffen Durinck Luca Pandini Paolo Provero James Allen Olivier Arnaiz Mohammad Hamza Awedh Richard Baldock Giulia Barbiera Philippe Bardou Tim Beck Andrew Blake Merideth Bonierbale Anthony J Brookes Gabriele Bucci Iwan Buetti Sarah Burge Cédric Cabau Joseph W Carlson Claude Chelala Charalambos Chrysostomou Davide Cittaro Olivier Collin Raul Cordova Rosalind J Cutts Erik Dassi Alex Di Genova Anis Djari Anthony Esposito Heather Estrella Eduardo Eyras Julio Fernandez-Banet Simon Forbes Robert C Free Takatomo Fujisawa Emanuela Gadaleta Jose M Garcia-Manteiga David Goodstein Kristian Gray José Afonso Guerra-Assunção Bernard Haggarty Dong-Jin Han Byung Woo Han Todd Harris Jayson Harshbarger Robert K Hastings Richard D Hayes Claire Hoede Shen Hu Zhi-Liang Hu Lucie Hutchins Zhengyan Kan Hideya Kawaji Aminah Keliet Arnaud Kerhornou Sunghoon Kim Rhoda Kinsella Christophe Klopp Lei Kong Daniel Lawson Dejan Lazarevic Ji-Hyun Lee Thomas Letellier Chuan-Yun Li Pietro Lio Chu-Jun Liu Jie Luo Alejandro Maass Jerome Mariette Thomas Maurel Stefania Merella Azza Mostafa Mohamed Francois Moreews Ibounyamine Nabihoudine Nelson Ndegwa Céline Noirot Cristian Perez-Llamas Michael Primig Alessandro Quattrone Hadi Quesneville Davide Rambaldi James Reecy Michela Riba Steven Rosanoff Amna Ali Saddiq Elisa Salas Olivier Sallou Rebecca Shepherd Reinhard Simon Linda Sperling William Spooner Daniel M Staines Delphine Steinbach Kevin Stone Elia Stupka Jon W Teague Abu Z Dayem Ullah Jun Wang Doreen Ware Marie Wong-Erasmus Ken Youens-Clark Amonida Zadissa Shi-Jian Zhang Arek Kasprzyk

Nucleic Acids Res 2015 Jul 20;43(W1):W589-98. Epub 2015 Apr 20.

Center for Translational Genomics and Bioinformatics San Raffaele Scientific Institute, Via Olgettina 58, 20132 Milan, Italy Department of Biological Sciences, Faculty of Science, King Abdulaziz University, Jeddah, Saudi Arabia

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http://dx.doi.org/10.1093/nar/gkv350DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4489294PMC
July 2015

microRNA profiling identifies cancer-specific and prognostic signatures in pediatric malignancies.

Clin Cancer Res 2009 Sep 25;15(17):5560-8. Epub 2009 Aug 25.

Oncogenomics Section, Pediatric Oncology Branch, Advanced Technology Center, National Cancer Institute, Gaithersburg, Maryland 20877, USA.

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http://dx.doi.org/10.1158/1078-0432.CCR-08-3287DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2737097PMC
September 2009

GenomeGraphs: integrated genomic data visualization with R.

BMC Bioinformatics 2009 Jan 6;10. Epub 2009 Jan 6.

Life Sciences Department, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd, Berkeley, CA 94720, USA.

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http://dx.doi.org/10.1186/1471-2105-10-2DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2629762PMC
January 2009

Pre-processing of microarray data and analysis of differential expression.

Authors:
Steffen Durinck

Methods Mol Biol 2008 ;452:89-110

Katholieke Universiteit Leuven, Leuven, Belgium.

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http://dx.doi.org/10.1007/978-1-60327-159-2_4DOI Listing
July 2008

In vitro differential sensitivity of melanomas to phenothiazines is based on the presence of codon 600 BRAF mutation.

Mol Cancer Ther 2008 Jun 4;7(6):1337-46. Epub 2008 Jun 4.

Genomics and Bioinformatics Group, Laboratory of Molecular Pharmacology, National Cancer Institute, Bethesda, Maryland, USA.

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http://dx.doi.org/10.1158/1535-7163.MCT-07-2308DOI Listing
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2705835PMC
June 2008

BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis.

Bioinformatics 2005 Aug;21(16):3439-40

Department of Electronical Engineering, ESAT-SCD, K.U.Leuven, Kasteelpark Arenberg 10, 3001 Leuven-Heverlee, Belgium.

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http://dx.doi.org/10.1093/bioinformatics/bti525DOI Listing
August 2005

Importing MAGE-ML format microarray data into BioConductor.

Bioinformatics 2004 Dec 15;20(18):3641-2. Epub 2004 Jul 15.

Department of Electronical Engineering, ESAT-SCD, K.U. Leuven, Kasteelpark Arenberg 10, 3001, Leuven-Heverlee, Belgium.

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http://dx.doi.org/10.1093/bioinformatics/bth396DOI Listing
December 2004